Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B16
         (425 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54MJ3 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_Q54H94 Cluster: Putative uncharacterized protein; n=1; ...    33   3.3  
UniRef50_Q97GN0 Cluster: TPR repeats containing protein; n=6; Cl...    32   4.3  
UniRef50_Q54QX5 Cluster: Putative uncharacterized protein; n=3; ...    32   4.3  
UniRef50_Q0H0F6 Cluster: Putative uncharacterized protein; n=7; ...    32   5.7  
UniRef50_Q8I1R4 Cluster: Putative uncharacterized protein PFD084...    32   5.7  
UniRef50_Q8NGP9 Cluster: Olfactory receptor 5AR1; n=46; Amniota|...    31   9.9  

>UniRef50_Q54MJ3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 537

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 62  NNNGKTHANGKAQ*YNFRNPIHLNNYTIVIKRNSNIINRLSIT 190
           NNN  +H N      N  NP H N+   +I+ N N+IN  + T
Sbjct: 38  NNNNSSHNNNN----NNHNPTHNNSNNNIIRNNDNLINTTTTT 76


>UniRef50_Q54H94 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 690

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 2   HEDHHEGQT*TRAVIKKKKPNNNGKTHANGKAQ*YNFRN-PIHLNNYTI--VIKRNSNII 172
           H+D H+  +     I     NNN   + N      +++N  ++L+NY +  +I+ NS I 
Sbjct: 502 HQDDHDLDSINNMYINNNNNNNNNNNNNNNNNNNNSYKNSKLNLDNYLLSPIIRSNSKIY 561

Query: 173 NRL 181
           N L
Sbjct: 562 NYL 564


>UniRef50_Q97GN0 Cluster: TPR repeats containing protein; n=6;
           Clostridium|Rep: TPR repeats containing protein -
           Clostridium acetobutylicum
          Length = 357

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -3

Query: 336 ASLYFYIVLTYRVMCEH--LIFYIRVSLSL 253
           A L +YI +TYR++C H   I+Y+  S+SL
Sbjct: 245 AVLLYYIGVTYRILCNHEKAIYYLNESMSL 274


>UniRef50_Q54QX5 Cluster: Putative uncharacterized protein; n=3;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1496

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 62  NNNGKTHANGKAQ*YNFR--NPIHLNNYTIVIKRNSNIIN 175
           NNN   + N K   YN+   N  + NN  I+I  N+NIIN
Sbjct: 632 NNNNYNNNNNKNNNYNYNYNNNKNNNNNNIIINNNNNIIN 671


>UniRef50_Q0H0F6 Cluster: Putative uncharacterized protein; n=7;
           Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
           protein - Mycoplasma hyopneumoniae
          Length = 244

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 53  KKPNNNGKTHANGKAQ*YNFRNPIHLNNYTIV 148
           KK NNN   + N KA  Y++ NP  L NY I+
Sbjct: 176 KKMNNNLVDNVNAKANYYSYFNPNRLGNYYIL 207


>UniRef50_Q8I1R4 Cluster: Putative uncharacterized protein PFD0840w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFD0840w - Plasmodium falciparum
            (isolate 3D7)
          Length = 2031

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 41   VIKKKKPNNNGKTHANGKAQ*YNFRNPIHLNNYTIVIKRNSNI 169
            V KKKK  NN   + NG     N+RN  H  +Y ++ K+ +NI
Sbjct: 1678 VRKKKKKINNDNINNNGNNYRNNYRNNYH--HYNVITKKCTNI 1718


>UniRef50_Q8NGP9 Cluster: Olfactory receptor 5AR1; n=46;
           Amniota|Rep: Olfactory receptor 5AR1 - Homo sapiens
           (Human)
          Length = 310

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 399 SCFINGHVCFCILLGCFTAGMASLYFYIVLTY 304
           S F++  VC  ++LG + AG+ SL  +  LT+
Sbjct: 133 STFMSKQVCLALMLGSYLAGLVSLVAHTTLTF 164


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,968,188
Number of Sequences: 1657284
Number of extensions: 5284635
Number of successful extensions: 21461
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20226
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)