Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B16
         (425 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   2.0  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   2.0  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        23   4.5  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   6.0  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      22   7.9  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 359 RRIQKQTWPLIKQERYRNSTD 421
           RR+  Q+WP   +  Y+N+ D
Sbjct: 238 RRMMMQSWPCKSEVMYKNTLD 258


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 359 RRIQKQTWPLIKQERYRNSTD 421
           RR+  Q+WP   +  Y+N+ D
Sbjct: 238 RRMMMQSWPCKSEVMYKNTLD 258


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 323 KYKDAMPAVKQPRRIQKQTWPLIKQERYRNSTDI 424
           K   A   VK+P R +  T  L +  RY+ ST++
Sbjct: 26  KSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 59


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 283 QVFTHHTICQNNIKIQRRHASGETAQKNTKTNMAIDK 393
           + + HH   ++N +  +  A+GE A K  KT  +  K
Sbjct: 35  ETWLHHYTPESNRQSAQWTATGEPAPKRGKTQKSAGK 71


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 347 VKQPRRIQKQTWPLIKQERYRNSTDI 424
           VK+P R +  T  L +  RY+ ST++
Sbjct: 36  VKKPHRYRPGTVALREIRRYQKSTEL 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,013
Number of Sequences: 2352
Number of extensions: 4823
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)