Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B16
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z68114-4|CAA92159.1| 324|Caenorhabditis elegans Hypothetical pr... 28 3.2
U23527-3|AAC46573.3| 596|Caenorhabditis elegans Hypothetical pr... 28 3.2
U61953-7|AAO91704.1| 330|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z99281-56|CAB16513.1| 131|Caenorhabditis elegans Hypothetical p... 27 5.6
U23511-7|AAC46795.1| 435|Caenorhabditis elegans Hypothetical pr... 27 5.6
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 27 5.6
Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical p... 27 7.4
Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical pr... 27 7.4
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 283 DILHQSQPLAFLKHFHSTLKKNCIQRI 203
D L +QPL L +F STL++ CI+R+
Sbjct: 257 DALTLTQPLLLL-YFSSTLRQKCIERL 282
>Z68114-4|CAA92159.1| 324|Caenorhabditis elegans Hypothetical
protein F17A2.6 protein.
Length = 324
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 393 FINGHVCFCILLGCFTAGMASLYFYIVLTYR--VMCEHLIFYIRVSLSLF 250
F+ G + L CF ++S+YFY ++T+ + ++ +F I +LF
Sbjct: 236 FVKGVILQTFLPLCFYCPISSIYFYCIVTHEEILFQQYFMFLIPAFPALF 285
>U23527-3|AAC46573.3| 596|Caenorhabditis elegans Hypothetical
protein K09E2.2 protein.
Length = 596
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 205 FVVYNFFLVSSESVLEK-READSDVKYQVFTHHTICQNNIKIQ 330
F + +V ++ ++ K R+ D+ ++FT+ IC N I +
Sbjct: 485 FEKHGVHIVPNDDIINKHRDTKKDLDLEIFTYRLICLNQINCE 527
>U61953-7|AAO91704.1| 330|Caenorhabditis elegans Hypothetical
protein R08C7.13 protein.
Length = 330
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -2
Query: 343 WHGVFVFLYCSDISCDV*TLDILHQSQPLAFLKHFHSTLKKNCIQRI 203
WH ++L C +I CD T+ + ++ + F L +Q++
Sbjct: 120 WHLTKIYLCCLEIDCDANTIRDMFDGLEISLFQIFFRNLVNPFVQKM 166
>Z99281-56|CAB16513.1| 131|Caenorhabditis elegans Hypothetical
protein Y57G11C.12b protein.
Length = 131
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 71 GKTHANGKAQ*YNFRNPIHLNNY 139
G+TH + K+ Y F NP H+ NY
Sbjct: 87 GETHQHMKSIRYAFYNPDHVRNY 109
>U23511-7|AAC46795.1| 435|Caenorhabditis elegans Hypothetical
protein C32D5.7 protein.
Length = 435
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 378 VCFCILLGCFTAGMASLYFYIVLTYRVMCEHLIFY 274
+ + I++ + AG A Y Y LT ++ EHL+F+
Sbjct: 149 IAYSIVIIAYFAGFAE-YLYFRLTSLIVPEHLVFH 182
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 13 SRGTDINASGY*KKKTKQQRKNARKRKSSIVQLQKSDTS 129
+R + G K KQ+ N++K+K+ QK+DTS
Sbjct: 17 TRSVTVRKLGPGANKEKQESDNSQKKKTVNAAAQKADTS 55
>Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 107 NFRNPIHLNNYTIVIKRNSNIINRL 181
+ RNP+HL + V ++N I RL
Sbjct: 129 HLRNPVHLGEFNAVNEKNEKFIVRL 153
>Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical
protein T04A11.12 protein.
Length = 327
Score = 26.6 bits (56), Expect = 7.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 96 AFPFACVFPLLFGFF 52
+ PF CV+P++F FF
Sbjct: 159 SIPFICVYPIIFTFF 173
>Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 107 NFRNPIHLNNYTIVIKRNSNIINRL 181
+ RNP+HL + V ++N I RL
Sbjct: 129 HLRNPVHLGEFNAVNEKNEKFIVRL 153
>Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical
protein C06G8.1 protein.
Length = 355
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 155 RNSNIINRLSITDIILYSLYTIFF*CRVK 241
+N + ++ +ILY+ YTIF+ C K
Sbjct: 68 KNDGTVKWVTGCQVILYTTYTIFYWCMTK 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,645,878
Number of Sequences: 27780
Number of extensions: 135918
Number of successful extensions: 642
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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