Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B15
(351 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0045 - 27304696-27305299,27305392-27305521,27305625-27305760 32 0.11
10_04_0019 + 7638491-7638982 30 0.59
02_02_0641 + 12566416-12566599,12567132-12567327,12568319-125684... 30 0.59
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 29 1.0
06_03_1470 + 30371391-30372353 28 1.8
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 28 1.8
10_02_0079 + 5016115-5016936 28 2.4
10_05_0061 - 8690637-8691072,8691370-8691464 27 3.1
05_07_0344 + 29411767-29411961,29412692-29412741,29413295-294134... 27 3.1
02_02_0527 - 11191601-11192872 27 4.1
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 27 5.5
10_05_0098 + 9148424-9148682,9148817-9148905 27 5.5
09_04_0389 + 17239182-17239316,17240246-17240878 27 5.5
08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899 27 5.5
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846... 27 5.5
08_02_0570 - 18818175-18818609,18819681-18819689 26 7.2
04_03_0264 - 13619329-13621708,13621742-13621830 26 7.2
01_06_0230 + 27718840-27720188,27720983-27721174,27721488-277215... 26 7.2
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 26 9.6
04_04_0151 + 23134467-23134627,23134657-23134803,23135413-231355... 26 9.6
03_06_0234 - 32535281-32535919,32536121-32536860,32536911-32536953 26 9.6
02_05_0924 - 32749682-32750200,32750756-32750959,32751062-327511... 26 9.6
02_04_0318 - 21999640-21999705,21999706-21999768,21999822-219998... 26 9.6
>05_07_0045 - 27304696-27305299,27305392-27305521,27305625-27305760
Length = 289
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 73 VGMVQPRNSSASVDSCTMRMPTPAIGPRTSTVARNTLSATKTPTAT 210
+G VQPR ++++ CT PA+ P +S+V ++ A AT
Sbjct: 118 MGAVQPRAAASAPSQCTSSAMAPALSPASSSVTSSSGDACFAAAAT 163
>10_04_0019 + 7638491-7638982
Length = 163
Score = 29.9 bits (64), Expect = 0.59
Identities = 26/93 (27%), Positives = 41/93 (44%)
Frame = +1
Query: 16 AIGSTESSDMKRLALATGLVGMVQPRNSSASVDSCTMRMPTPAIGPRTSTVARNTLSATK 195
A G + +S R L G + + S + T+ + A G +S+V +L K
Sbjct: 14 APGVSTTSTPSRDILRRGTRRLTTTCKAEPSGGNSTLELAAGAAGLASSSVVAWSLYTLK 73
Query: 196 TPTATFL*VNPATDTGSAKAVTLVCSAALLCWS 294
T T L P G+A+ V+ + AAL+ WS
Sbjct: 74 T-TGCGLPPGPGGALGAAEGVSYLVVAALIGWS 105
>02_02_0641 +
12566416-12566599,12567132-12567327,12568319-12568406,
12569279-12569330,12569423-12569765,12571282-12571684,
12571770-12571841,12572632-12572817,12573174-12573239,
12574802-12575174,12575917-12576014,12578179-12578305,
12578734-12578924,12579265-12579540,12579837-12579866
Length = 894
Score = 29.9 bits (64), Expect = 0.59
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 117 LYNENAHSCDWPENVDGCQKHPLC-NEDPNGNVPLG 221
LYN +CD P++ D C PL +E+P P G
Sbjct: 581 LYNATLRNCDVPDDHDYCSVWPLIPSEEPTSVSPYG 616
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 244 CQYLLQDLPRGTLPLGSSLQRGCFWQPSTFSGQSQEWAFSLY 119
C +LL+ LPR LP + FW P S EW SL+
Sbjct: 2057 CNFLLELLPR-ILPPEWQHAKQLFWSPGHQGQPSVEWMVSLW 2097
>06_03_1470 + 30371391-30372353
Length = 320
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 147 WPENVDGCQKHPLC-NEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFD 299
WP DG C E+ NGN P W C G R P + ++
Sbjct: 146 WPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYN 197
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 28.3 bits (60), Expect = 1.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 231 CRIYLEERCRWGLRCR 184
C+ +L++RCR+G CR
Sbjct: 152 CKFFLQQRCRFGSNCR 167
>10_02_0079 + 5016115-5016936
Length = 273
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 MVQPRNSSASVDSCTMRMPTPAIGPRTSTVARN 177
M +P SSAS+ S + P P PR + A N
Sbjct: 1 MARPTESSASIASGGLAAPAPPTNPRNAIPAAN 33
>10_05_0061 - 8690637-8691072,8691370-8691464
Length = 176
Score = 27.5 bits (58), Expect = 3.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 75 WNGTATEQLCIGGLLYNENAHS 140
W+G A Q C+GG AH+
Sbjct: 73 WDGAAQAQACVGGATQRREAHT 94
>05_07_0344 +
29411767-29411961,29412692-29412741,29413295-29413430,
29413931-29414032,29414153-29414380,29414460-29414544,
29414648-29414730,29414854-29414945,29415048-29415141
Length = 354
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 114 LLYNENAHSCDWPENVDGCQKHPLCNEDPNGNVPL 218
L+++ +A WP+ V ++ PLC +P G L
Sbjct: 128 LVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKL 162
>02_02_0527 - 11191601-11192872
Length = 423
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 342 RTLPLVGLHILASVYRRPA*Q-GSAADEGNRLGTASICCR 226
R +PL LA+V RR + G+AAD LGT CCR
Sbjct: 94 RFVPLPHPPELAAVVRRGSFDLGTAADLHFHLGTGIYCCR 133
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 26.6 bits (56), Expect = 5.5
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = -2
Query: 293 DQHSRAALQTRVTALALPVSVA-GFT*RNVAVGVFVAERV------FLATVDVLGPIAGV 135
DQ SRAALQ V LA V V G RNV + + + +V +++ P+
Sbjct: 45 DQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENA 104
Query: 134 GILIVQE 114
G +++E
Sbjct: 105 GAALIRE 111
>10_05_0098 + 9148424-9148682,9148817-9148905
Length = 115
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 YNENAHSCDWPENVDGCQKHP-LCNEDPNGNVPLGKSCNRYWQCQG 254
++E S W + +HP +D GNV C R+W C G
Sbjct: 31 FDEKTRSACWRKAAVVMGRHPERWRQDAAGNVV----CRRFWSCHG 72
>09_04_0389 + 17239182-17239316,17240246-17240878
Length = 255
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 55 ALATGLVGMVQPRNSSASVDSCTMRMPTPAIGPRTSTVARNTLSATKTPTAT 210
AL L+G Q R+ ++S R+P PR S AR+ L K+ T
Sbjct: 155 ALGRVLLGRRQTRHLVEVLESAKTRVPVLTAAPRRSGPARDELRRPKSRPET 206
>08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899
Length = 712
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 114 VHRCRAVPWLYHSNKSSSECKTFHVRRFRRAN 19
+ + + PWL H +K CK F R N
Sbjct: 399 IEQAKVWPWLMHISKQDGTCKLFDPLRSENYN 430
>08_02_0731 -
20483518-20484154,20484182-20484375,20484541-20484640,
20485282-20485622
Length = 423
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 123 CTGVHRCRAVPWLYHSNKSSSECKTFHVRRFRRANRNAP 7
C VHR R WL+ +SSS RR R R P
Sbjct: 269 CGHVHRPRLSRWLHPPRRSSSPVPPPSPRRILRRARPTP 307
>08_02_0570 - 18818175-18818609,18819681-18819689
Length = 147
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 202 LGSSLQRGCFWQPSTFSGQSQEWAFSLYRSPPMQSCSV 89
+G GC W+P+ G+ + + RS + CSV
Sbjct: 88 VGRQCGGGCQWKPAVKGGEVEPGVMDMERSRAGRCCSV 125
>04_03_0264 - 13619329-13621708,13621742-13621830
Length = 822
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 105 CRAVPWLYHSNKSSSECKT 49
CRAV + Y+ N S ECK+
Sbjct: 394 CRAVLFRYYHNDSDGECKS 412
>01_06_0230 +
27718840-27720188,27720983-27721174,27721488-27721569,
27721651-27721839,27721964-27722077,27722470-27722560,
27722632-27722789,27723401-27723826,27724355-27724727,
27725075-27725238
Length = 1045
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 170 ATVDVLGPIAGVGILIVQESTDAELFRGCTIPT 72
ATV ++ +AG G+L+ + D+ G +PT
Sbjct: 8 ATVGLIPNLAGRGVLLPASAPDSSACHGFVVPT 40
>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
Length = 748
Score = 25.8 bits (54), Expect = 9.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 85 QPRNSSASVDSCTMRMPTPA 144
QPR +D C+ + P PA
Sbjct: 343 QPRGGGPKIDECSQKFPLPA 362
>04_04_0151 +
23134467-23134627,23134657-23134803,23135413-23135512,
23135554-23135638,23135767-23136419
Length = 381
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 114 VHRCRAVPWLYHSNKSSSECKTFHVRRFRRANRNAP 7
VHR R WL +SSS +RR R R P
Sbjct: 248 VHRPRLSRWLRPPRRSSSPVPPLSLRRILRRPRPTP 283
>03_06_0234 - 32535281-32535919,32536121-32536860,32536911-32536953
Length = 473
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 197 VFVAERVFLATVDVLGPIAGVGILIVQESTDAELFRGCTI 78
VFV + AT++VL P VGI + + T + G +
Sbjct: 349 VFVLSDLVAATIEVLEPKLNVGIAGIGDETGGLVLDGANV 388
>02_05_0924 -
32749682-32750200,32750756-32750959,32751062-32751109,
32751769-32751819,32751907-32752032,32752117-32752257,
32752750-32752971,32753160-32753312,32753536-32753718,
32753964-32754110,32754212-32754319,32754426-32754530,
32754824-32754928,32755243-32755310,32755498-32755576,
32755876-32755935,32756023-32756076,32756168-32756233,
32756701-32756753,32757042-32757096,32757645-32757787,
32758236-32758333,32758436-32758716
Length = 1022
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 34 SSDMKRLALATGLVGMVQPRNSSASVDSCTMRMPTPAIGPRTSTVARNTLSATKTP 201
+S +R + A V +V R+S ++P P G TST T S+ TP
Sbjct: 6 ASRQRRASSAAAAVAVV--RSSPQPQQQQQQQLPIPQSGSPTSTTTTTTSSSRLTP 59
>02_04_0318 -
21999640-21999705,21999706-21999768,21999822-21999884,
21999938-22000000,22001097-22001141,22001914-22002325,
22003313-22003475,22004086-22004132,22004458-22004564,
22004651-22004684,22004754-22004807,22005599-22005723
Length = 413
Score = 25.8 bits (54), Expect = 9.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 256 PPWHCQYLLQDLP 218
P WHC Y L LP
Sbjct: 357 PSWHCYYFLNPLP 369
Score = 25.8 bits (54), Expect = 9.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 256 PPWHCQYLLQDLP 218
P WHC Y L LP
Sbjct: 378 PSWHCYYFLNPLP 390
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,670,961
Number of Sequences: 37544
Number of extensions: 224269
Number of successful extensions: 755
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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