Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B13
         (372 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF522193-1|AAN10046.1|  477|Drosophila melanogaster putative Cap...    28   4.5  
AF505865-1|AAO20968.1|  477|Drosophila melanogaster G-protein co...    28   4.5  
AE014296-3575|AAS65092.1|  477|Drosophila melanogaster CG14575-P...    28   4.5  

>AF522193-1|AAN10046.1|  477|Drosophila melanogaster putative Cap2b
           receptor protein.
          Length = 477

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 13  FAERFALEREHSAYSRKTEHSTPFEQIALNGNKV 114
           F E  A +R HS + R ++H   FE  + + N+V
Sbjct: 391 FRESSAYDRVHSVHVRASQHPNKFETDSSSANRV 424


>AF505865-1|AAO20968.1|  477|Drosophila melanogaster G-protein
           coupled receptor protein.
          Length = 477

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 13  FAERFALEREHSAYSRKTEHSTPFEQIALNGNKV 114
           F E  A +R HS + R ++H   FE  + + N+V
Sbjct: 391 FRESSAYDRVHSVHVRASQHPNKFETDSSSANRV 424


>AE014296-3575|AAS65092.1|  477|Drosophila melanogaster CG14575-PB
           protein.
          Length = 477

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 13  FAERFALEREHSAYSRKTEHSTPFEQIALNGNKV 114
           F E  A +R HS + R ++H   FE  + + N+V
Sbjct: 391 FRESSAYDRVHSVHVRASQHPNKFETDSSSANRV 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,769,887
Number of Sequences: 53049
Number of extensions: 184362
Number of successful extensions: 289
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)