Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B11
(571 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 26 0.20
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 26 0.20
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 26 0.20
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 1.4
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 3.2
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 3.2
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 5.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 7.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.4
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 26.2 bits (55), Expect = 0.20
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 276 ILEIQNCYCFTNLQTFVSNFYPINHQ 199
I+ + +TNL SNF PINHQ
Sbjct: 76 IINTETGLSYTNLDYGNSNFPPINHQ 101
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 26.2 bits (55), Expect = 0.20
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 276 ILEIQNCYCFTNLQTFVSNFYPINHQ 199
I+ + +TNL SNF PINHQ
Sbjct: 76 IINTETGLSYTNLDYGNSNFPPINHQ 101
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 26.2 bits (55), Expect = 0.20
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 276 ILEIQNCYCFTNLQTFVSNFYPINHQ 199
I+ + +TNL SNF PINHQ
Sbjct: 76 IINTETGLSYTNLDYGNSNFPPINHQ 101
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 180 VCKYYFGYAILIF 142
+C YYF YA +IF
Sbjct: 111 LCVYYFYYAFIIF 123
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 180 VCKYYFGYAILIFVWCC 130
VC YYF Y L+F CC
Sbjct: 256 VCIYYFYYMHLLF--CC 270
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = -2
Query: 183 YVCKYYFGYAILIFVWCCYLFGCE---ITC*LYFRR 85
+ C + L+F+ C Y F C + C YF R
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCR 303
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -3
Query: 125 SLAVKLLVDSTLEGVFDMIYHCSFRYHSQSFQVIGHRF 12
S+ + + + S G+F +Y C F Y V+ F
Sbjct: 239 SVPLLMKIASQFVGIFCSLYFCIFGYIYDDEMVVPQNF 276
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -3
Query: 125 SLAVKLLVDSTLEGVFDMIYHCSFRYHSQSFQVIGHRF 12
S+ + + + S G+F +Y C F Y V+ F
Sbjct: 64 SVPLLMKIASQFVGIFCSLYFCIFGYIYDDEMVVPQNF 101
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 457 RFYWQTRLE*PAVLWTAT 404
R Y + E P +LWT+T
Sbjct: 409 RLYKKAGKEIPVILWTST 426
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 90 NSNATKSSGLTSPLSV 105
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 497 NTDSSKSSQKTSPIAV 544
N++++KSS TSP++V
Sbjct: 134 NSNATKSSGLTSPLSV 149
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,368
Number of Sequences: 336
Number of extensions: 2565
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -