Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B11
         (571 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    29   0.11 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.3  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = -3

Query: 455 ILLADKVRITGCSVDCNLARACSCSFSILTPSIILLK--PSKASWRVSVRDFNW-WG*WL 285
           I LA  V +T   V C L  A  C+F  + P  I  +  P    +   V +F+W W  WL
Sbjct: 66  INLAVPVTVTLLLVFCGLREADVCAFDNILPDYIFFRMPPIYYLFDYVVNEFSWLWLLWL 125

Query: 284 SS 279
            S
Sbjct: 126 LS 127


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 151 NGISKIVFTHIANLHRLMIDWVKIRDKGLKICKAI 255
           NG+ ++   HI N H  M+D +   +   K+C  +
Sbjct: 270 NGLVQL--NHINNSHGRMLDLLYANNAAAKLCSPV 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,251
Number of Sequences: 2352
Number of extensions: 10638
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)