BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B11
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457178-1|CAG33459.1| 212|Homo sapiens CINP protein. 33 0.71
BC000600-1|AAH00600.1| 212|Homo sapiens cyclin-dependent kinase... 33 0.71
AK056112-1|BAB71095.1| 212|Homo sapiens protein ( Homo sapiens ... 33 0.71
BC065518-1|AAH65518.1| 569|Homo sapiens KIAA1706 protein protein. 32 1.2
AK027386-1|BAB55076.1| 569|Homo sapiens protein ( Homo sapiens ... 32 1.2
AB051493-1|BAB21797.1| 573|Homo sapiens KIAA1706 protein protein. 32 1.2
AF228149-1|AAF44748.1| 212|Homo sapiens cyclin-dependent kinase... 31 2.9
AF228148-1|AAF44747.1| 212|Homo sapiens cyclin-dependent kinase... 31 2.9
U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein. 30 5.0
BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB dom... 30 5.0
AB208862-1|BAD92099.1| 700|Homo sapiens zinc finger protein ZNF... 30 5.0
BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting... 30 6.6
BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting... 30 6.6
AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 11... 30 6.6
>CR457178-1|CAG33459.1| 212|Homo sapiens CINP protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.71
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 28/174 (16%)
Frame = +1
Query: 133 TPNKDQNGIS-KIVFTHIANLHRLMIDWVKIRDKGLKICK-----AITILNLENYE---- 282
TP K +S + + + A+ H L++ W + D G I++LN + E
Sbjct: 10 TPRKPVLSVSARKIKDNAADWHNLILKWETLNDAGFTTANNIANLKISLLNKDKIELDSS 69
Query: 283 -----DNH------YPHQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKL------- 408
+N Y +L+ L E LQ LDG I + L+ + + +L
Sbjct: 70 SPASKENEEKVCLEYNEELEKLCEELQATLDGLTKIQVKMEKLSSTTKGICELENYHYGE 129
Query: 409 QSTEQPVILTLSASKISENVNSSYKSLLREYRLEQIITENIAHCRDENLLEVYI 570
+S P+ T + E + + +E L++ + + +AH D +L Y+
Sbjct: 130 ESKRPPLFHTWPTTHFYEVSHKLLEMYRKELLLKRTVAKELAHTGDPDLTLSYL 183
>BC000600-1|AAH00600.1| 212|Homo sapiens cyclin-dependent kinase
2-interacting protein protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.71
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 28/174 (16%)
Frame = +1
Query: 133 TPNKDQNGIS-KIVFTHIANLHRLMIDWVKIRDKGLKICK-----AITILNLENYE---- 282
TP K +S + + + A+ H L++ W + D G I++LN + E
Sbjct: 10 TPRKPVLSVSARKIKDNAADWHNLILKWETLNDAGFTTANNIANLKISLLNKDKIELDSS 69
Query: 283 -----DNH------YPHQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKL------- 408
+N Y +L+ L E LQ LDG I + L+ + + +L
Sbjct: 70 SPASKENEEKVCLEYNEELEKLCEELQATLDGLTKIQVKMEKLSSTTKGICELENYHYGE 129
Query: 409 QSTEQPVILTLSASKISENVNSSYKSLLREYRLEQIITENIAHCRDENLLEVYI 570
+S P+ T + E + + +E L++ + + +AH D +L Y+
Sbjct: 130 ESKRPPLFHTWPTTHFYEVSHKLLEMYRKELLLKRTVAKELAHTGDPDLTLSYL 183
>AK056112-1|BAB71095.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ31550 fis, clone NT2RI2001054, highly similar to
Homo sapiens from HeLa cyclin-dependent kinase 2
interacting ).
Length = 212
Score = 33.1 bits (72), Expect = 0.71
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 28/174 (16%)
Frame = +1
Query: 133 TPNKDQNGIS-KIVFTHIANLHRLMIDWVKIRDKGLKICK-----AITILNLENYE---- 282
TP K +S + + + A+ H L++ W + D G I++LN + E
Sbjct: 10 TPRKPVLSVSARKIKDNAADWHNLILKWETLNDAGFTTANNIANLKISLLNKDKIELDSS 69
Query: 283 -----DNH------YPHQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKL------- 408
+N Y +L+ L E LQ LDG I + L+ + + +L
Sbjct: 70 SPASKENEEKVCLEYNEELEKLCEELQATLDGLTKIQVKMEKLSSTTKGICELENYHYGE 129
Query: 409 QSTEQPVILTLSASKISENVNSSYKSLLREYRLEQIITENIAHCRDENLLEVYI 570
+S P+ T + E + + +E L++ + + +AH D +L Y+
Sbjct: 130 ESKRPPLFHTWPTTHFYEVSHKLLEMYRKELLLKRTVAKELAHTGDPDLTLSYL 183
>BC065518-1|AAH65518.1| 569|Homo sapiens KIAA1706 protein protein.
Length = 569
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 250 AITILNLENYEDNHYP-HQLKSLTETLQEALDGFNNIM 360
A+T+L EN NH H+L S +TLQE L G +++
Sbjct: 407 ALTLLGSENPSKNHSDGHRLASFAQTLQETLKGEKDVI 444
>AK027386-1|BAB55076.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ14480 fis, clone MAMMA1002215. ).
Length = 569
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 250 AITILNLENYEDNHYP-HQLKSLTETLQEALDGFNNIM 360
A+T+L EN NH H+L S +TLQE L G +++
Sbjct: 407 ALTLLGSENPSKNHSDGHRLASFAQTLQETLKGEKDVI 444
>AB051493-1|BAB21797.1| 573|Homo sapiens KIAA1706 protein protein.
Length = 573
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 250 AITILNLENYEDNHYP-HQLKSLTETLQEALDGFNNIM 360
A+T+L EN NH H+L S +TLQE L G +++
Sbjct: 411 ALTLLGSENPSKNHSDGHRLASFAQTLQETLKGEKDVI 448
>AF228149-1|AAF44748.1| 212|Homo sapiens cyclin-dependent kinase 2
interacting protein protein.
Length = 212
Score = 31.1 bits (67), Expect = 2.9
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 28/174 (16%)
Frame = +1
Query: 133 TPNKDQNGIS-KIVFTHIANLHRLMIDWVKIRDKGLKICK-----AITILNLENYE---- 282
TP K +S + + + A+ H L++ W + D G I++LN + E
Sbjct: 10 TPRKPVLSVSARKIKDNAADWHNLILKWETLNDAGFTTANNIANLKISLLNKDKIELDSS 69
Query: 283 -----DNH------YPHQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKL------- 408
+N Y +L+ L E LQ LDG I + L+ + + +L
Sbjct: 70 SPASKENEEKVCLEYNEELEKLCEELQATLDGLTKIQVKMEKLSSTTKGICELENYHYGE 129
Query: 409 QSTEQPVILTLSASKISENVNSSYKSLLREYRLEQIITENIAHCRDENLLEVYI 570
+S P+ T + E + + +E L++ + + +AH + +L Y+
Sbjct: 130 ESKRPPLFHTWPTTHFYEVSHKLLEMYKKELLLKRTVAKELAHTGNPDLTLSYL 183
>AF228148-1|AAF44747.1| 212|Homo sapiens cyclin-dependent kinase 2
interacting protein protein.
Length = 212
Score = 31.1 bits (67), Expect = 2.9
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 28/174 (16%)
Frame = +1
Query: 133 TPNKDQNGIS-KIVFTHIANLHRLMIDWVKIRDKGLKICK-----AITILNLENYE---- 282
TP K +S + + + A+ H L++ W + D G I++LN + E
Sbjct: 10 TPRKPVLSVSARKIKDNAADWHNLILKWETLNDAGFTTANNIANLKISLLNKDKIELDSS 69
Query: 283 -----DNH------YPHQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKL------- 408
+N Y +L+ L E LQ LDG I + L+ + + +L
Sbjct: 70 SPASKENEEKVCLEYNEELEKLCEELQATLDGLTKIQVKMEKLSSTTKGICELENYHYGE 129
Query: 409 QSTEQPVILTLSASKISENVNSSYKSLLREYRLEQIITENIAHCRDENLLEVYI 570
+S P+ T + E + + +E L++ + + +AH + +L Y+
Sbjct: 130 ESKRPPLFHTWPTTHFYEVSHKLLEMYKKELLLKRTVAKELAHTGNPDLTLSYL 183
>U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein.
Length = 1053
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 HQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKLQSTEQ-PVILTLSASKISENVN 471
H + LT +QE +E V + E ++AL + +TE+ P + TLS I + VN
Sbjct: 963 HAVSILTAGMQEQESSGPQELETVVVTGETMEALEAVAATEEYPSVSTLSDQSIMQVVN 1021
>BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB domain
containing 11 protein.
Length = 1053
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 HQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKLQSTEQ-PVILTLSASKISENVN 471
H + LT +QE +E V + E ++AL + +TE+ P + TLS I + VN
Sbjct: 963 HAVSILTAGMQEQESSGPQELETVVVTGETMEALEAVAATEEYPSVSTLSDQSIMQVVN 1021
>AB208862-1|BAD92099.1| 700|Homo sapiens zinc finger protein
ZNF-U69274 variant protein.
Length = 700
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 HQLKSLTETLQEALDGFNNIMEGVRILNEQLQALAKLQSTEQ-PVILTLSASKISENVN 471
H + LT +QE +E V + E ++AL + +TE+ P + TLS I + VN
Sbjct: 610 HAVSILTAGMQEQESSGPQELETVVVTGETMEALEAVAATEEYPSVSTLSDQSIMQVVN 668
>BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 29.9 bits (64), Expect = 6.6
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 369 DPFHNIVEAI*SFLEGFGERFQLV-GV--MVIFIILEIQNCYCFTNLQTFVSNFYPINHQ 199
DP N+ +FL + + ++ G+ MV +IL + N F + F P
Sbjct: 523 DPIWNLASNKLTFLNSYKMKMSVILGIVQMVFGVILSLFNHIYFRRTLNIILQFIPEM-- 580
Query: 198 AM*VGYVCKYYFGYAILIFVWCCY 127
+ +C + + ++IF WCC+
Sbjct: 581 ---IFILCLFGYLVFMIIFKWCCF 601
>BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 29.9 bits (64), Expect = 6.6
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 369 DPFHNIVEAI*SFLEGFGERFQLV-GV--MVIFIILEIQNCYCFTNLQTFVSNFYPINHQ 199
DP N+ +FL + + ++ G+ MV +IL + N F + F P
Sbjct: 523 DPIWNLASNKLTFLNSYKMKMSVILGIVQMVFGVILSLFNHIYFRRTLNIILQFIPEM-- 580
Query: 198 AM*VGYVCKYYFGYAILIFVWCCY 127
+ +C + + ++IF WCC+
Sbjct: 581 ---IFILCLFGYLVFMIIFKWCCF 601
>AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 116
kDa accessory subunit protein.
Length = 840
Score = 29.9 bits (64), Expect = 6.6
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 369 DPFHNIVEAI*SFLEGFGERFQLV-GV--MVIFIILEIQNCYCFTNLQTFVSNFYPINHQ 199
DP N+ +FL + + ++ G+ MV +IL + N F + F P
Sbjct: 523 DPIWNLASNKLTFLNSYKMKMSVILGIVQMVFGVILSLFNHIYFRRTLNIILQFIPEM-- 580
Query: 198 AM*VGYVCKYYFGYAILIFVWCCY 127
+ +C + + ++IF WCC+
Sbjct: 581 ---IFILCLFGYLVFMIIFKWCCF 601
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,209,970
Number of Sequences: 237096
Number of extensions: 1459152
Number of successful extensions: 3621
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3621
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -