Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B08
(494 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 196 2e-49
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 190 1e-47
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 175 6e-43
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 4e-42
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 156 2e-37
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 154 1e-36
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 151 1e-35
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 151 1e-35
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 150 1e-35
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 149 3e-35
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 128 7e-29
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 125 6e-28
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 124 1e-27
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 123 2e-27
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 119 4e-26
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 109 4e-23
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 98 1e-19
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 77 2e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 70 2e-11
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 62 7e-09
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 62 9e-09
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 61 2e-08
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 55 1e-06
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 55 1e-06
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 55 1e-06
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 48 9e-05
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 44 0.001
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 42 0.006
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.093
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 38 0.12
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.66
UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.66
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 0.87
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 34 1.5
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 2.7
UniRef50_UPI0000EBD2B3 Cluster: PREDICTED: hypothetical protein;... 33 3.5
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 3.5
UniRef50_Q47KQ6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 33 4.6
UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1; ... 32 6.1
UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;... 32 6.1
UniRef50_Q21YT9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.1
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 32 6.1
UniRef50_Q6SI22 Cluster: NHL repeat domain protein; n=1; uncultu... 32 8.1
UniRef50_Q9XIL4 Cluster: Mutator-like transposase; n=1; Arabidop... 32 8.1
UniRef50_Q6VY42 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_A6R052 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_Q96L96 Cluster: Alpha-protein kinase 3; n=4; Eutheria|R... 32 8.1
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 196 bits (478), Expect = 2e-49
Identities = 89/113 (78%), Positives = 99/113 (87%)
Frame = +1
Query: 79 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 258
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN VH ++ KN RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 190 bits (464), Expect = 1e-47
Identities = 88/115 (76%), Positives = 98/115 (85%)
Frame = +1
Query: 73 MSLSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKE 252
MSL ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 253 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 175 bits (425), Expect = 6e-43
Identities = 78/110 (70%), Positives = 88/110 (80%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 267
+RP VSV S G ++PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 268 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (418), Expect = 4e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 106 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 285
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPT-DTQIRLPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 286 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 156 bits (379), Expect = 2e-37
Identities = 74/110 (67%), Positives = 85/110 (77%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 267
ARP VSVYS S+ V G + PLP VF APIR D+V VH +M+KN+RQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVG-TCPLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 268 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 154 bits (373), Expect = 1e-36
Identities = 72/113 (63%), Positives = 85/113 (75%)
Frame = +1
Query: 79 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 258
++ ARP+VSV+ A +S+PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 151 bits (365), Expect = 1e-35
Identities = 69/112 (61%), Positives = 82/112 (73%)
Frame = +1
Query: 79 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 258
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVG-EVEIPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 414
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 151 bits (365), Expect = 1e-35
Identities = 70/109 (64%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +1
Query: 94 PLVSVYS-EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 270
PLVSV+S + S V +PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 271 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWH 113
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 150 bits (364), Expect = 1e-35
Identities = 66/111 (59%), Positives = 85/111 (76%)
Frame = +1
Query: 85 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 264
V RP+VSV+S +E G+++ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 265 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 149 bits (362), Expect = 3e-35
Identities = 68/109 (62%), Positives = 83/109 (76%)
Frame = +1
Query: 91 RPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 270
RP VSV++ GA+L +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 271 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 128 bits (309), Expect = 7e-29
Identities = 61/105 (58%), Positives = 72/105 (68%)
Frame = +1
Query: 103 SVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESW 282
+VYS ++ L +P VF + IR D+V VH +M KN RQ Y VS AG TSA SW
Sbjct: 5 NVYSCNKNIID--KLKIPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSW 62
Query: 283 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
GTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 63 GTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 125 bits (301), Expect = 6e-28
Identities = 60/100 (60%), Positives = 66/100 (66%)
Frame = +1
Query: 115 EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGR 294
E V +L LP VF PIR DLV + RQPY VSK AG Q SAESWGTGR
Sbjct: 9 EADGVTVKKTLDLPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGR 68
Query: 295 AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 414
A+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 69 AIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 124 bits (298), Expect = 1e-27
Identities = 56/107 (52%), Positives = 75/107 (70%)
Frame = +1
Query: 97 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 276
L +VY+ + ++P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 277 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 123 bits (297), Expect = 2e-27
Identities = 60/109 (55%), Positives = 76/109 (69%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 267
+RP V++Y + + LP VF APIR D+V+ V+ + SKN RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 268 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 414
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 119 bits (286), Expect = 4e-26
Identities = 50/67 (74%), Positives = 56/67 (83%)
Frame = +1
Query: 217 KNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 396
++ + V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 397 KPWRRWH 417
K WR+WH
Sbjct: 82 KVWRKWH 88
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 109 bits (261), Expect = 4e-23
Identities = 50/110 (45%), Positives = 75/110 (68%)
Frame = +1
Query: 85 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 264
++R V+V +++ + +++ LP VF PIR ++V +V+V+++KNA+QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 265 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 414
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 97.9 bits (233), Expect = 1e-19
Identities = 52/107 (48%), Positives = 61/107 (57%)
Frame = +1
Query: 94 PLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSA 273
P V V+ VA LP P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQVA--ELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 274 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 414
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 77.4 bits (182), Expect = 2e-13
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +1
Query: 253 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 184 DLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 330
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 70.1 bits (164), Expect = 2e-11
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 142 SLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVR 321
++ LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+
Sbjct: 15 TVELPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVK 74
Query: 322 GGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 414
G +G+ A GG + APT P + W
Sbjct: 75 GRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 62.1 bits (144), Expect = 7e-09
Identities = 35/100 (35%), Positives = 54/100 (54%)
Frame = +1
Query: 100 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 279
++VYS K ++ + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITE--EIELPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 280 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 399
+G+GR A +PRV+G S + AF GGR P +
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 61.7 bits (143), Expect = 9e-09
Identities = 40/106 (37%), Positives = 52/106 (49%)
Frame = +1
Query: 100 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 279
+ VY VA PL F+ PIRPDL+ ++S QP V + AG + S ES
Sbjct: 29 LKVYGIDGAYVADIEAPLHFL--EPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCES 86
Query: 280 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 417
+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 87 FGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/101 (38%), Positives = 53/101 (52%)
Frame = +1
Query: 97 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 276
+V VY E+ S+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGG--EKDSVVLPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 277 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 399
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 136 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG--TGRAVARI 309
G + LP VF P R DL+ + + + QP AG SA+S TG ARI
Sbjct: 13 GKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARI 72
Query: 310 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 399
R++GGG R G+ RGGR P K
Sbjct: 73 ARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = +1
Query: 151 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 330
LP +F P+R DL+ V ++ ++ QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 331 THRSGQGAFGNMCRGGRMFAP 393
SG+ A GGR+ P
Sbjct: 82 --NSGEAALAPNTVGGRLAFP 100
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 54.8 bits (126), Expect = 1e-06
Identities = 34/103 (33%), Positives = 49/103 (47%)
Frame = +1
Query: 106 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 285
V + K EV + LP VF RPD++ +++ + RQPY + +G S E+WG
Sbjct: 5 VLNLKGEVTE--EIELPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWG 62
Query: 286 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 414
G AR+PR + G + GGR P KP R+W
Sbjct: 63 PGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKW 100
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 48.4 bits (110), Expect = 9e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 151 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 324
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 44.4 bits (100), Expect = 0.001
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +1
Query: 100 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 279
V +YS E+ + LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGEMKG--EIDLPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 280 WGTGRAVARIPRVRGG 327
G ++R+PR+ GG
Sbjct: 63 TRPGLGISRMPRIAGG 78
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 42.3 bits (95), Expect = 0.006
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Frame = +1
Query: 124 EVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSK-------EAGHQTSAESW 282
E G ++ LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 283 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 414
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDW 139
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 38.3 bits (85), Expect = 0.093
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 398 LVGANIRPPRHMLPNAPCP 342
LVGANI PPRHMLP AP P
Sbjct: 106 LVGANILPPRHMLPKAPWP 124
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 37.9 bits (84), Expect = 0.12
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 136 GASLPLPFVFKAPIRPDLVNDVHVSMSKN 222
GAS +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 37.5 bits (83), Expect = 0.16
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = -1
Query: 377 PPRHMLPNAPCPDLWV--PPPRTRGIRATARPVPQDSALV**PASLLTQ*GWRAFFDIDT 204
PP LP P PD +V PPP+ G A PVP L P L + G A F +
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVPTLGELA--PLLPLAEAGAAATFSV-- 407
Query: 203 WTSLTRSGLMGALNTNGRGSEAPATTSLFS-EYTDTKGRATDR 78
W + + G L G A + F E +GRATD+
Sbjct: 408 WPAGCSVRVEGQLLIRLEGLVAFSGNLTFQPEMKRFRGRATDK 450
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.66
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 301 ARIPRVRGGGTHRSGQGAFGNMCRGG 378
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1015
Score = 35.5 bits (78), Expect = 0.66
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 208 IRGHH*RGQV*WAP*IQTGGGAKPLRRPHSSPNTPTLKVGLL 83
+R H + + WA +Q G+KP RP+S PNTP + G+L
Sbjct: 715 VREHAIKAERKWAV-LQAPAGSKPTSRPNSLPNTPQQRFGVL 755
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 0.87
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 211 MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 381
+++ A ++E G A+SW TGRA A + R R GG R A N G R
Sbjct: 18 LARAAASSVAANREGGG--GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 34.3 bits (75), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 389 ANIRPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 270
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 33.9 bits (74), Expect = 2.0
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 217 KNARQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 384
+NA P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 33.5 bits (73), Expect = 2.7
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 157 FVFKAPIRPDLVNDVHVS----MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 324
F++K P +PD + HV+ +NA +P+ + E H +A G A + + G
Sbjct: 434 FLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAAFMAQHNG 493
Query: 325 GGTHRSGQG 351
G S G
Sbjct: 494 GANMESHAG 502
>UniRef50_UPI0000EBD2B3 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 152
Score = 33.1 bits (72), Expect = 3.5
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 380 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSAL 267
RPP LP A CP W+PP + G+ +P PQ AL
Sbjct: 90 RPPAQALPGA-CPPTWLPPCLSAGLH---QPRPQPPAL 123
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.1 bits (72), Expect = 3.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 374 PRHMLPNAPCPDLWVPPPR 318
PRH+ P AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_Q47KQ6 Cluster: Putative uncharacterized protein; n=1;
Thermobifida fusca YX|Rep: Putative uncharacterized
protein - Thermobifida fusca (strain YX)
Length = 168
Score = 32.7 bits (71), Expect = 4.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 392 GANI-RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVP 282
GA++ R ML + P P W PPR GI T R +P
Sbjct: 118 GAHLGREASWMLSSGPSPRAWGSPPRFSGIPTTGRSIP 155
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 351 CIR*HVPRRTYVRADQAVEALAPSREPTAE 440
C+R HVP +VRAD+ + LAP +P E
Sbjct: 142 CVRQHVPWWPHVRADEDLPPLAPQDQPAPE 171
>UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to ZP1 -
Monodelphis domestica
Length = 649
Score = 32.3 bits (70), Expect = 6.1
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 377 PPRHMLPNAPCPDLWVPPPR-TRGIRATARPVPQDSA 270
PPR LP P P L PPR TR R+T RP P SA
Sbjct: 148 PPRPSLPARPRPPLSAQPPRSTRPPRST-RPPPPPSA 183
>UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1756
Score = 32.3 bits (70), Expect = 6.1
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +1
Query: 88 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPD---LVNDVHVSMSKNARQPYCVSKEAG 258
ARP ++ Y + G S PLP AP +P ++D+ + P+ ++ +G
Sbjct: 475 ARPKITSYPQNRRPAGGLSRPLPSPGAAPSKPHHILTISDLEDTRRPRRHSPH--TQNSG 532
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTH 336
++ S G IP R GG+H
Sbjct: 533 TRSHMTSPTLGSPAGPIPS-RAGGSH 557
>UniRef50_Q21YT9 Cluster: Putative uncharacterized protein; n=1;
Rhodoferax ferrireducens T118|Rep: Putative
uncharacterized protein - Rhodoferax ferrireducens
(strain DSM 15236 / ATCC BAA-621 / T118)
Length = 266
Score = 32.3 bits (70), Expect = 6.1
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 206 TWTSLTRSGLMGALNTNGRG-----SEAPATTSLFSEYTDTKGRATDRLISLYQRS 54
TW ++RSG + AL TN R ++AP+ L S Y T A D L+ L R+
Sbjct: 52 TWLGISRSGRLAAL-TNHRNPAALRADAPSRGELVSAYLQTDASALDYLMELAGRA 106
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 32.3 bits (70), Expect = 6.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +1
Query: 154 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 333
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 334 HRSGQGAFGNMCRGGRM 384
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>UniRef50_Q6SI22 Cluster: NHL repeat domain protein; n=1; uncultured
bacterium 105|Rep: NHL repeat domain protein - uncultured
bacterium 105
Length = 1281
Score = 31.9 bits (69), Expect = 8.1
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 257 PASLLTQ*GWRAFFDIDTWTSLTRSGLMGALNTNGRGSEAPATT--SLFSEYTDTKGRAT 84
PA + TQ W F IDT S+ R G L T + PAT +LF E GR
Sbjct: 1114 PARVSTQNAW---FPIDTLPSILRHGESQMLFTFANATRTPATVRLTLFDELGKEHGRWE 1170
Query: 83 DRLISLYQRSYS 48
L + QR +S
Sbjct: 1171 RILPAFSQRVWS 1182
>UniRef50_Q9XIL4 Cluster: Mutator-like transposase; n=1; Arabidopsis
thaliana|Rep: Mutator-like transposase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 545
Score = 31.9 bits (69), Expect = 8.1
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +1
Query: 202 HVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 351
HV M+ A ++ A T A GTGRA R PRV+ G SG+G
Sbjct: 467 HVLMTAQAAHGQTMT--ARFLTRANQTGTGRARGRPPRVKNGEGKNSGKG 514
>UniRef50_Q6VY42 Cluster: Putative uncharacterized protein; n=1;
Streptomyces phage VWB|Rep: Putative uncharacterized
protein - Streptomyces phage VWB
Length = 1440
Score = 31.9 bits (69), Expect = 8.1
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -3
Query: 276 LGAGLMTGLLADAVGLARVLRH*YVDIIDEVRSDGRL 166
LGAGL TGL A AV A V +V I++ +S+ RL
Sbjct: 57 LGAGLKTGLAAVAVAGAAVFSAAFVQAIEQDKSNARL 93
>UniRef50_A6R052 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 497
Score = 31.9 bits (69), Expect = 8.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 377 PPRHMLPNAPCPDLWVPPPRT 315
PPRH+ P + P L +PPPRT
Sbjct: 199 PPRHLSPFSNSPPLHLPPPRT 219
>UniRef50_Q96L96 Cluster: Alpha-protein kinase 3; n=4; Eutheria|Rep:
Alpha-protein kinase 3 - Homo sapiens (Human)
Length = 1907
Score = 31.9 bits (69), Expect = 8.1
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 208 SMSKNARQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGGR 381
++++ ARQP + AG A +W TG A A P V GG S + GGR
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPTRGWGAGGR 218
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,791,338
Number of Sequences: 1657284
Number of extensions: 10301838
Number of successful extensions: 37550
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 35386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37504
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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