Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B08
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 238  CVSKEAGHQTSAESW 282
            C  K+ GH+ S  SW
Sbjct: 1152 CEEKKPGHKPSTSSW 1166


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -1

Query: 224 AFFDIDTWTSLTRS--GLMGALNTNGR 150
           +F DI+TW  L +S   +   L T G+
Sbjct: 494 SFLDINTWKMLVKSFDAIDSKLQTGGK 520



 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 224 AFFDIDTWTSLTRSGLMGALNTNGRGSE 141
           AF+D+D W +L  +     +N   +G +
Sbjct: 102 AFWDVDKWRTLFTNLQYIDINLQNKGKK 129


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
          protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 53 YSSKKHYRRWQRPSAP 6
          Y   KHY  WQ  + P
Sbjct: 15 YIYSKHYSYWQSKNVP 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,483
Number of Sequences: 336
Number of extensions: 2048
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)