Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B05
(483 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 316 5e-89
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 226 7e-62
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 154 5e-40
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 130 7e-33
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 316 bits (777), Expect = 5e-89
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 316 bits (777), Expect = 5e-89
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 89 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 316 bits (777), Expect = 5e-89
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 316 bits (777), Expect = 5e-89
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 398
Score = 316 bits (777), Expect = 5e-89
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 469 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 529 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 588
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 589 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 626
Score = 314 bits (771), Expect = 3e-88
Identities = 154/158 (97%), Positives = 156/158 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 317 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTL
Sbjct: 377 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTL 436
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 474
Score = 314 bits (771), Expect = 3e-88
Identities = 154/158 (97%), Positives = 156/158 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 393 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 453 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 512
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 513 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 550
Score = 283 bits (694), Expect = 6e-79
Identities = 138/140 (98%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 545 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 605 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 664
Query: 368 SDYNIQKESTLHLVLRLRGG 427
SDYNIQKESTLHLVLRLRGG
Sbjct: 665 SDYNIQKESTLHLVLRLRGG 684
Score = 187 bits (456), Expect = 4e-50
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 226 bits (553), Expect = 7e-62
Identities = 110/112 (98%), Positives = 110/112 (98%)
Frame = +2
Query: 56 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 235
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60
Query: 236 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 391
ITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKE
Sbjct: 61 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
Score = 136 bits (328), Expect = 1e-34
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +2
Query: 284 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVRTLTGKT 463
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV+TLTGKT
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60
Query: 464 ITLEVE 481
ITLEVE
Sbjct: 61 ITLEVE 66
Score = 107 bits (256), Expect = 7e-26
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 163
+TLEVEPSDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKE
Sbjct: 61 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 380 IQKESTLHLVLRLRGG 427
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 133 bits (321), Expect = 9e-34
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 188 LRGG 199
LRGG
Sbjct: 73 LRGG 76
Score = 37.5 bits (83), Expect = 6e-05
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 130 bits (314), Expect = 7e-33
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 380 IQKE 391
IQKE
Sbjct: 61 IQKE 64
Score = 109 bits (262), Expect = 1e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 163
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Score = 37.5 bits (83), Expect = 6e-05
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,812
Number of Sequences: 336
Number of extensions: 1845
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -