Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B05
(483 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 316 5e-87
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 316 5e-87
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 213 8e-56
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 4e-38
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 128 2e-30
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 89 2e-18
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 58 3e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 4e-05
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 40 0.001
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.001
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 36 0.013
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.013
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.053
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.093
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.12
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.28
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.66
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 0.87
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 2.0
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 29 2.7
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 3.5
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 4.6
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 89 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 398
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 317 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 377 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 436
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 474
Score = 283 bits (694), Expect = 5e-77
Identities = 138/140 (98%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 393 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 453 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 512
Query: 368 SDYNIQKESTLHLVLRLRGG 427
SDYNIQKESTLHLVLRLRGG
Sbjct: 513 SDYNIQKESTLHLVLRLRGG 532
Score = 187 bits (456), Expect = 4e-48
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 89 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 316 bits (777), Expect = 5e-87
Identities = 155/158 (98%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
SDYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 283 bits (694), Expect = 5e-77
Identities = 138/140 (98%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 368 SDYNIQKESTLHLVLRLRGG 427
SDYNIQKESTLHLVLRLRGG
Sbjct: 361 SDYNIQKESTLHLVLRLRGG 380
Score = 187 bits (456), Expect = 4e-48
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 213 bits (519), Expect = 8e-56
Identities = 105/135 (77%), Positives = 119/135 (88%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL++ ++L D R+L
Sbjct: 73 LRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSL 131
Query: 368 SDYNIQKESTLHLVL 412
+DYNI++ S LHL L
Sbjct: 132 ADYNIKQGSILHLFL 146
Score = 167 bits (406), Expect = 4e-42
Identities = 85/94 (90%), Positives = 87/94 (92%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQI V+ KT TL+VE
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVE 93
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 154 bits (373), Expect = 4e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 380 IQKESTLHLVLRLRGG 427
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 133 bits (321), Expect = 8e-32
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Query: 188 LRGG 199
LRGG
Sbjct: 73 LRGG 76
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 128 bits (310), Expect = 2e-30
Identities = 63/67 (94%), Positives = 63/67 (94%)
Frame = +2
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 368 SDYNIQK 388
SDYNIQK
Sbjct: 135 SDYNIQK 141
Score = 107 bits (257), Expect = 5e-24
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 160
+TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 91 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 416 LRGGMQIFVRTLTGKTITLEVE 481
L MQIFV+TLTGKTITLEVE
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVE 96
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 77 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 202
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 305 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 430
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 58.4 bits (135), Expect = 3e-09
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 206 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 382
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 383 QKESTLHLVLRLRGG 427
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
Score = 54.0 bits (124), Expect = 6e-08
Identities = 28/58 (48%), Positives = 34/58 (58%)
Frame = +2
Query: 26 PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 199
P TI VK I+ K G P DQQRL+F G+ L D T I +TLHL++RL GG
Sbjct: 90 PKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 370
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 371 DYNIQKES 394
+YNI ++S
Sbjct: 127 EYNIDEKS 134
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 166
+E+ +T+ +K KI+ K+ P +LI+AGK L D L +YNI ++S
Sbjct: 81 VEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +2
Query: 155 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 328
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 329 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLE 475
I K + +L + +E+ L L G + + +T+ L+
Sbjct: 79 IIGKKMAKPNESLLQCKV-RETGFTAYLYLLSGRNVELTREDVETLKLQ 126
Score = 34.3 bits (75), Expect = 0.053
Identities = 27/93 (29%), Positives = 46/93 (49%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 193
L++ + TIE ++ ++ DK G PP QR I G+ ++ N ES L +R
Sbjct: 50 LQIPLNTTIEKLQNEVADKYGFPPKVQRWII-------GKKMAKPN---ESLLQCKVR-E 98
Query: 194 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 292
G ++ L+G+ + L E +T++ K K Q
Sbjct: 99 TGFTAYLYLLSGRNVELTREDVETLKLQKQKTQ 131
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 203 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 380 IQK 388
+++
Sbjct: 67 LKQ 69
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 47 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 160
+K++I+ K GIP D QRL F K+L D TL+ N+++
Sbjct: 32 LKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 376
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 377 NIQKESTLHLVLR 415
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
Score = 35.1 bits (77), Expect = 0.031
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVLR 187
TL+V +EN +A ++ + G+P + L G QL D +TL+ Y++++ + +V R
Sbjct: 14 TLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAYSVKENDVILMVRR 73
>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
Length = 533
Score = 36.3 bits (80), Expect = 0.013
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 2/132 (1%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV-LRL 190
LE+ T+ N+K ++ G+P + Q + D L D+ K++ H L+L
Sbjct: 19 LEIASDKTVYNLKLICEEHFGVPVELQAIYLVDN---DDVELQDWACLKDAATHTFKLQL 75
Query: 191 RGGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
F L I LE+ + T+ N+K ++ G+P + Q + D L
Sbjct: 76 MESAAKFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVD---NDDVEL 132
Query: 368 SDYNIQKESTLH 403
D+ K++ H
Sbjct: 133 QDWACLKDAATH 144
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.013
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 68 KEGIPPDQQRLIFAGKQLEDGRTLSDYN 151
+EGIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 34.3 bits (75), Expect = 0.053
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 301
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 33.5 bits (73), Expect = 0.093
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 98 LIFAGKQLEDGRTLSDYNIQKESTLH--LVLRLRGGMQIFVKTLTGKTITLEVEAS---D 262
L +AG LED +D I TL L+ + + + +G+ + S
Sbjct: 27 LNYAGGVLEDDWIFADIGIPPGVTLRCELIQNTKSYLNVHC-AYSGEIVKFTEPMSLFDT 85
Query: 263 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 406
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
Score = 32.7 bits (71), Expect = 0.16
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +2
Query: 35 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 211
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L G F
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIR--LETWNGWADF 143
Query: 212 VKTLT-GK-TITLEVEASDTIENVKAKIQDK 298
+K T G+ T TL+ S + + + AK Q +
Sbjct: 144 LKAATKGQLTPTLKHMLSISEDPLVAKYQQR 174
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 74 GIPPDQQRLIFAGKQLEDGRTLSDYN 151
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 302 GIPPDQQRLIFAGKQLEDGRTLSDYN 379
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +2
Query: 206 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 385
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 386 KEST 397
+++T
Sbjct: 245 QKAT 248
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 209 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 388
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 389 ESTLHLVLR 415
+TL + L+
Sbjct: 229 GATLQIELQ 237
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TL P + ++ + G P + ++ K LED T++D + Q +TL + L+
Sbjct: 178 ITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQPGATLQIELQ 237
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 161 ESTLHLVLRLRGGM 202
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 389 ESTLHLVLRLRGGM 430
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 161 ESTLHLVLRLRGGM 202
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 389 ESTLHLVLRLRGGM 430
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/65 (23%), Positives = 36/65 (55%)
Frame = +2
Query: 191 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 370
R +Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 371 DYNIQ 385
+ +Q
Sbjct: 771 EEKLQ 775
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 227 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 355
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +2
Query: 191 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 370
R +Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T +
Sbjct: 7 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDT 66
Query: 371 DYNIQ 385
+ +Q
Sbjct: 67 EEKLQ 71
>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = +2
Query: 221 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 400
L ++ + D +V +I+D G + + G + D + +++ + L
Sbjct: 237 LRSPSVDATLRGQDISASVYQEIRDLGGTGVIALKPVMRGPDINDDGSHERESLRANAVL 296
Query: 401 HLVLRLRGGMQIFVRTL 451
LVLR++GG VR L
Sbjct: 297 PLVLRMKGGEDSQVRDL 313
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 83 PDQQRLIFAGKQLEDGRTLSDY--NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEA 256
PD ++ I G L+DG+T+ D + ++E L+ ++ G + L + L E
Sbjct: 538 PDSKKNILEGLDLQDGKTVEDLLSDYRRELELYRQIKDENGTVSRIVNLEKQVNDLSGEN 597
Query: 257 SDTIENVKAKIQDKEG 304
S +++ ++DK G
Sbjct: 598 S-SLKTTMGDVKDKVG 612
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 221 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 352
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.5 bits (58), Expect = 6.1
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 101 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GKTITLEVEASDTIENV 277
+ + + R L + ++ TLHLV LRG I +T + G++ V A I
Sbjct: 326 VVGSRHFDVARMLREVDVTGTITLHLVEPLRGFGAIGPRTASRGQSTEEPVNAEKKIGTG 385
Query: 278 KAKIQDKEGIPP 313
KA ++ K PP
Sbjct: 386 KATLRLKAKGPP 397
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,039,646
Number of Sequences: 59808
Number of extensions: 238844
Number of successful extensions: 771
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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