Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B05
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    27   0.11 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.14 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.32 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.2  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 94  LLIRRNTFFVLNFSFYIFNC 35
           LLIR  +F +LNF+   FNC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156



 Score = 24.2 bits (50), Expect = 0.74
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 322 LLIGRNAFFVLNFSFYIFNC 263
           LLI   +F +LNF+   FNC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 29  SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 139
           +DT+   K KI  K  I PD + L+   KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767



 Score = 26.6 bits (56), Expect = 0.14
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 257 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
           +DT+   K KI  K  I PD + L+   KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 345 NSKTVALFLTTTFKRNPHFTWSYVC 419
           N   +ALF T   K+N   T+ Y+C
Sbjct: 599 NLPKLALFATKDIKQNEEITFDYMC 623



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 117 NSKTVALFPITTFKKNLHFTWSYAC 191
           N   +ALF     K+N   T+ Y C
Sbjct: 599 NLPKLALFATKDIKQNEEITFDYMC 623


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 422  RADVRPGEVWIPFECCSQKECDRLR 348
            R D+  G+VW+ F  C Q+  D  R
Sbjct: 994  RPDLEYGKVWL-FFGCRQRNLDLYR 1017


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,699
Number of Sequences: 438
Number of extensions: 2027
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)