Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B05
(483 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 309 6e-85
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 309 6e-85
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 309 6e-85
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 309 6e-85
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 309 6e-85
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 309 6e-85
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 309 6e-85
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 309 6e-85
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 309 6e-85
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 309 6e-85
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 309 6e-85
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 309 6e-85
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 302 9e-83
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 295 1e-80
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 293 3e-80
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 268 1e-72
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 224 2e-59
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 222 1e-58
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 153 8e-38
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 153 8e-38
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 1e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 1e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 152 1e-37
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 117 4e-27
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 105 2e-23
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 90 8e-19
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 90 8e-19
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 75 3e-14
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 74 6e-14
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 68 4e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 7e-12
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 54 4e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 9e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 4e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 5e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 5e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 5e-07
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 50 6e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 50 1e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 48 3e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 48 3e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 3e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 6e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 6e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 6e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 1e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 1e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 45 3e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 45 3e-05
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 7e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 9e-04
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.002
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 39 0.002
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.006
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.006
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.006
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.011
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 36 0.011
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.044
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.10
At1g11970.1 68414.m01383 hypothetical protein 31 0.31
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.54
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.71
At1g80120.1 68414.m09378 expressed protein contains Pfam profile... 29 2.2
At1g47680.1 68414.m05297 hypothetical protein 29 2.2
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 28 2.9
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 28 3.8
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 27 5.0
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 6.6
At1g69650.1 68414.m08015 meprin and TRAF homology domain-contain... 27 8.8
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 276 bits (676), Expect = 7e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 361 ADYNIQKESTLHLVLRLRGG 380
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 276 bits (676), Expect = 7e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 276 bits (676), Expect = 7e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 190 bits (464), Expect = 3e-49
Identities = 92/98 (93%), Positives = 97/98 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 301
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 90 SSVLSSPANNSKTVALFPITTFKKNLHFTWSYACAVVCR 206
SSV SS ++ + L+P TT +++L FTWS VV +
Sbjct: 268 SSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 306
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 306 FRPISSVLSLPANNSKTVALFLTTTFKRNPHFTWSYVCAVVCR 434
F SSV S ++ + L+ TTT +R+ FTWS V VV +
Sbjct: 264 FLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 306
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 361 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 398
Score = 190 bits (464), Expect = 3e-49
Identities = 92/98 (93%), Positives = 97/98 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 301
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 377 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 90 SSVLSSPANNSKTVALFPITTFKKNLHFTWSYACAVVCR 206
SSV SS ++ + L+P TT +++L FTWS VV +
Sbjct: 420 SSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 458
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 306 FRPISSVLSLPANNSKTVALFLTTTFKRNPHFTWSYVCAVVCR 434
F SSV S ++ + L+ TTT +R+ FTWS V VV +
Sbjct: 416 FLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 458
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 190 bits (464), Expect = 3e-49
Identities = 92/98 (93%), Positives = 97/98 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 301
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 90 SSVLSSPANNSKTVALFPITTFKKNLHFTWSYACAVVCR 206
SSV SS ++ + L+P TT +++L FTWS VV +
Sbjct: 344 SSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 382
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 306 FRPISSVLSLPANNSKTVALFLTTTFKRNPHFTWSYVCAVVCR 434
F SSV S ++ + L+ TTT +R+ FTWS V VV +
Sbjct: 340 FLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 382
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 361 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 398
Score = 190 bits (464), Expect = 3e-49
Identities = 92/98 (93%), Positives = 97/98 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 317 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 301
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 377 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 90 SSVLSSPANNSKTVALFPITTFKKNLHFTWSYACAVVCR 206
SSV SS ++ + L+P TT +++L FTWS VV +
Sbjct: 420 SSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 458
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 306 FRPISSVLSLPANNSKTVALFLTTTFKRNPHFTWSYVCAVVCR 434
F SSV S ++ + L+ TTT +R+ FTWS V VV +
Sbjct: 416 FLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 458
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 285 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 322
Score = 190 bits (464), Expect = 3e-49
Identities = 92/98 (93%), Positives = 97/98 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 301
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 90 SSVLSSPANNSKTVALFPITTFKKNLHFTWSYACAVVCR 206
SSV SS ++ + L+P TT +++L FTWS VV +
Sbjct: 344 SSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 382
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 306 FRPISSVLSLPANNSKTVALFLTTTFKRNPHFTWSYVCAVVCR 434
F SSV S ++ + L+ TTT +R+ FTWS V VV +
Sbjct: 340 FLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 382
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 276 bits (676), Expect = 7e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 209 ADYNIQKESTLHLVLRLRGG 228
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 276 bits (676), Expect = 7e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 276 bits (676), Expect = 7e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 209 ADYNIQKESTLHLVLRLRGG 228
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 309 bits (759), Expect = 6e-85
Identities = 150/158 (94%), Positives = 157/158 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 209 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 246
Score = 276 bits (676), Expect = 7e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 165 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 225 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 285 ADYNIQKESTLHLVLRLRGG 304
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 302 bits (741), Expect = 9e-83
Identities = 149/158 (94%), Positives = 156/158 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+D NIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 133 AD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 169
Score = 299 bits (733), Expect = 8e-82
Identities = 148/158 (93%), Positives = 155/158 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR 147
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL
Sbjct: 148 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTL 207
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 208 ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 245
Score = 222 bits (542), Expect = 1e-58
Identities = 108/117 (92%), Positives = 113/117 (96%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 164 ITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 223
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 358
LRGGMQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 224 LRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
Score = 186 bits (452), Expect = 9e-48
Identities = 90/94 (95%), Positives = 94/94 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 94
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 295 bits (724), Expect = 1e-80
Identities = 143/158 (90%), Positives = 152/158 (96%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVLR
Sbjct: 91 ITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLR 150
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 151 LRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 210
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRL GGMQIFV TLTGKTITLEVE
Sbjct: 211 ADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVE 248
Score = 278 bits (682), Expect = 1e-75
Identities = 135/158 (85%), Positives = 148/158 (93%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+T++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+IQK+S LHL LR
Sbjct: 15 ITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALR 74
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL
Sbjct: 75 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTL 134
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+DYNIQKESTLHLVLRLRGGMQIFVRTLT KTI LEVE
Sbjct: 135 ADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVE 172
Score = 251 bits (615), Expect = 2e-67
Identities = 125/141 (88%), Positives = 132/141 (93%), Gaps = 1/141 (0%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+ LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 167 IALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 226
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RT 364
L GGMQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG T
Sbjct: 227 LCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYT 286
Query: 365 LSDYNIQKESTLHLVLRLRGG 427
L+DYNIQKESTLHLVLRLRGG
Sbjct: 287 LADYNIQKESTLHLVLRLRGG 307
Score = 153 bits (370), Expect = 8e-38
Identities = 75/94 (79%), Positives = 84/94 (89%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQK+S LHL LRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 63 IQKDSILHLALRLRGGMQIFVKTLTGKTITLEVE 96
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 293 bits (720), Expect = 3e-80
Identities = 141/156 (90%), Positives = 152/156 (97%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 193
LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN+Q++STLHL+LR R
Sbjct: 15 LEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFR 74
Query: 194 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 373
GGMQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 134
Query: 374 YNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
YNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEVE
Sbjct: 135 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 170
Score = 268 bits (658), Expect = 1e-72
Identities = 130/140 (92%), Positives = 137/140 (97%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 89 ITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTL 208
Query: 368 SDYNIQKESTLHLVLRLRGG 427
+DYNIQKESTLHLVLRLRGG
Sbjct: 209 ADYNIQKESTLHLVLRLRGG 228
Score = 168 bits (409), Expect = 1e-42
Identities = 80/94 (85%), Positives = 89/94 (94%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
+Q++STLHL+LR RGGMQIFV+TLTGKTITLEVE
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVE 94
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 268 bits (658), Expect = 1e-72
Identities = 136/163 (83%), Positives = 149/163 (91%), Gaps = 5/163 (3%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYNIQKESTLHLVLR
Sbjct: 15 ITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLR 74
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL
Sbjct: 75 LRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTL 134
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGK-----TITLEVE 481
+DYNIQKESTLHLVLRL GGMQIFV T +GK T+TL+VE
Sbjct: 135 ADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVE 177
Score = 226 bits (552), Expect = 7e-60
Identities = 121/170 (71%), Positives = 137/170 (80%), Gaps = 12/170 (7%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 91 ITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 150
Query: 188 LRGGMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL- 349
L GGMQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L
Sbjct: 151 LCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELF 210
Query: 350 -EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVRTL-----TGKTITLEVE 481
ED RTL+DY I+ STL L LRLRG M IFV+ L TG+ LEVE
Sbjct: 211 TEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVE 260
Score = 215 bits (526), Expect = 1e-56
Identities = 112/165 (67%), Positives = 127/165 (76%), Gaps = 7/165 (4%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEV SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL
Sbjct: 405 ITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFH 464
Query: 188 LRGGMQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 346
+R GMQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+
Sbjct: 465 IRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRV 524
Query: 347 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
L RTL DYNIQK ST+H + RGGMQIF++TLTGKTI LEVE
Sbjct: 525 LVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVE 569
Score = 211 bits (516), Expect = 2e-55
Identities = 114/157 (72%), Positives = 126/157 (80%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 193
LEVE SDTI+NVKAK+QDKE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R
Sbjct: 257 LEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFR 316
Query: 194 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTL 367
GMQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLIF GK+L+DG TL
Sbjct: 317 CGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTL 376
Query: 368 SDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEV 478
+DY+IQKESTLHLVL GMQIFV+ GK ITLEV
Sbjct: 377 ADYSIQKESTLHLVL----GMQIFVKLFGGKIITLEV 409
Score = 210 bits (513), Expect = 4e-55
Identities = 113/165 (68%), Positives = 128/165 (77%), Gaps = 7/165 (4%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDGRTLSDYNIQKESTLHLV 181
+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED RTL+DY I+ STL L
Sbjct: 172 LTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLA 231
Query: 182 LRLRGGMQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 346
LRLRG M IFVK L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK
Sbjct: 232 LRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKP 291
Query: 347 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
LE GRTL+ YNIQK STL+LV R R GMQIFV+TLT K I LEVE
Sbjct: 292 LEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVE 336
Score = 206 bits (503), Expect = 6e-54
Identities = 113/167 (67%), Positives = 127/167 (76%), Gaps = 9/167 (5%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
+ LEVE DTIENVKA +QDKEGI P QRLIF GK+L+DG TL+DY+IQKESTLHLV
Sbjct: 331 INLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLV 390
Query: 182 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 361
L GMQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGR
Sbjct: 391 L----GMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGR 446
Query: 362 TLSDYNIQKESTLHLVLRLRGGMQIFVRTL-------TGKTITLEVE 481
TL DYNI+ ESTLHL +R GMQIFV+T T KTITLEVE
Sbjct: 447 TLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVE 493
Score = 198 bits (483), Expect = 2e-51
Identities = 100/138 (72%), Positives = 112/138 (81%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H +
Sbjct: 488 ITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFL 547
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
RGGMQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL
Sbjct: 548 QRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTL 607
Query: 368 SDYNIQKESTLHLVLRLR 421
DY+I K+STL+LVLRLR
Sbjct: 608 GDYDIHKKSTLYLVLRLR 625
Score = 163 bits (396), Expect = 6e-41
Identities = 80/94 (85%), Positives = 88/94 (93%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEV+
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVK 96
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 224 bits (548), Expect = 2e-59
Identities = 106/140 (75%), Positives = 122/140 (87%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 73 LRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 368 SDYNIQKESTLHLVLRLRGG 427
DYNI+ S LHLVL LRGG
Sbjct: 133 KDYNIEGGSVLHLVLALRGG 152
Score = 170 bits (414), Expect = 4e-43
Identities = 82/94 (87%), Positives = 89/94 (94%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGG I V+TLTGK I +++E
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIE 94
Score = 92.7 bits (220), Expect = 1e-19
Identities = 39/65 (60%), Positives = 53/65 (81%)
Frame = +2
Query: 5 EVTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
E+ +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL
Sbjct: 88 EIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVL 147
Query: 185 RLRGG 199
LRGG
Sbjct: 148 ALRGG 152
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 222 bits (542), Expect = 1e-58
Identities = 105/141 (74%), Positives = 122/141 (86%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 367
LRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 73 LRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 368 SDYNIQKESTLHLVLRLRGGM 430
DY I+ S LHLVL LRGG+
Sbjct: 133 KDYAIEGGSVLHLVLALRGGL 153
Score = 170 bits (414), Expect = 4e-43
Identities = 82/94 (87%), Positives = 89/94 (94%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
IQKESTLHLVLRLRGG I V+TLTGK I +++E
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIE 94
Score = 90.2 bits (214), Expect = 6e-19
Identities = 38/66 (57%), Positives = 53/66 (80%)
Frame = +2
Query: 5 EVTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
E+ +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL
Sbjct: 88 EIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVL 147
Query: 185 RLRGGM 202
LRGG+
Sbjct: 148 ALRGGL 153
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 153 bits (370), Expect = 8e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGM 430
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 128 bits (308), Expect = 3e-30
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGM 202
LRGG+
Sbjct: 73 LRGGI 77
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 153 bits (370), Expect = 8e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGGM 430
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 128 bits (308), Expect = 3e-30
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGM 202
LRGG+
Sbjct: 73 LRGGI 77
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGG 427
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (307), Expect = 3e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGG 199
LRGG
Sbjct: 73 LRGG 76
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGG 427
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (307), Expect = 3e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGG 199
LRGG
Sbjct: 73 LRGG 76
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 380 IQKESTLHLVLRLRGG 427
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 128 bits (310), Expect = 1e-30
Identities = 67/94 (71%), Positives = 73/94 (77%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR
Sbjct: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Query: 188 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 289
LRGG K KT T + T + VK +
Sbjct: 73 LRGG----AKKRKKKTYTKPKKIKHTHKKVKLAV 102
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 428 MQIFVRTLTGKTITLEVE 481
MQIFV+TLTGKTITLEVE
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 117 bits (282), Expect = 4e-27
Identities = 70/152 (46%), Positives = 90/152 (59%), Gaps = 15/152 (9%)
Frame = +2
Query: 8 VTLEVEPSDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
+ LEV+ S T+ + + IPPD +++ D T+ + + T+ L
Sbjct: 7 INLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDSSKTIDL 66
Query: 179 VL--RLRGG----------MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 322
+ GG M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQ
Sbjct: 67 NIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQ 126
Query: 323 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 418
RLIF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 127 RLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
Score = 33.5 bits (73), Expect = 0.076
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Frame = +2
Query: 221 LTGKT-ITLEVEASDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQK 388
+ GKT I LEV++S T+ + + IPPD +++ D T+ + +
Sbjct: 1 MDGKTRINLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDS 60
Query: 389 ESTLHLVL--RLRGG----------MQIFVRTLTGKTITLEVE 481
T+ L + GG M IF++TLTG+ I LEVE
Sbjct: 61 SKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVE 103
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 105 bits (251), Expect = 2e-23
Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 15/145 (10%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYN 151
T EV+ SDTI +KAK ++KEGIP +QQRLIF G+ ++ D D
Sbjct: 63 TYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLK 122
Query: 152 IQKESTLHLVLRLRGG--MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 325
I E T LVLRL M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ
Sbjct: 123 INGEPTRQLVLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQD 182
Query: 326 LIFAGKQLEDGRTLSDYNIQKESTL 400
L G +L++ T+SDYNI+ ++ L
Sbjct: 183 LNHLGTKLKNNATISDYNIKPDANL 207
Score = 85.0 bits (201), Expect = 2e-17
Identities = 61/143 (42%), Positives = 77/143 (53%), Gaps = 21/143 (14%)
Frame = +2
Query: 116 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKTLTGKTITLEVEASDTIENV 277
++ED D I E T LV+ L G M IF+KTLTG+T T EV+ SDTI +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGRTNTYEVKGSDTIREL 75
Query: 278 KAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRL 418
KAK ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 76 KAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
Query: 419 RGG--MQIFVRTLTGKTITLEVE 481
M+IFV T+ KT LEV+
Sbjct: 136 GPAVLMRIFVSTIKEKTFILEVK 158
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVE-ASDTIE 271
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 380 IQKESTLHLVLRLRGG 427
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 81.8 bits (193), Expect = 2e-16
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = +2
Query: 5 EVTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
++ +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL
Sbjct: 12 QIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVL 71
Query: 185 RLRGG 199
LRGG
Sbjct: 72 ALRGG 76
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 89.8 bits (213), Expect = 8e-19
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 184
+ + V SD+IE+VK +IQ G Q+L+F G++L + DY + + + LHLVL
Sbjct: 46 IPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVL 105
Query: 185 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDG 358
+L + VKT GK VE I VK +I K G + PD+Q +++ G++LED
Sbjct: 106 KLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQ 165
Query: 359 RTLSDYNIQKESTLHLVLR 415
++D +S LHL++R
Sbjct: 166 SLINDICRNDDSVLHLLVR 184
Score = 60.9 bits (141), Expect = 4e-10
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 218 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 394
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 395 TLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
LHLVL+L + V+T GK VE
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVE 128
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 89.8 bits (213), Expect = 8e-19
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 184
+ + V SD+IE+VK +IQ G Q+L+F G++L + DY + + + LHLVL
Sbjct: 46 IPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVL 105
Query: 185 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDG 358
+L + VKT GK VE I VK +I K G + PD+Q +++ G++LED
Sbjct: 106 KLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQ 165
Query: 359 RTLSDYNIQKESTLHLVLR 415
++D +S LHL++R
Sbjct: 166 SLINDICRNDDSVLHLLVR 184
Score = 60.9 bits (141), Expect = 4e-10
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 218 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 394
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 395 TLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
LHLVL+L + V+T GK VE
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVE 128
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 74.9 bits (176), Expect = 3e-14
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Frame = +2
Query: 20 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVLRLRG 196
V SD+I +VK +IQ +G +Q+L++ G+++ + + DY + LHLV+RL
Sbjct: 48 VMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSD 107
Query: 197 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTL 367
I V+T+ GK L VE S + VK +I KE GIP D + L G++L+D R +
Sbjct: 108 LQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLI 166
Query: 368 SDYNIQKESTLHLVL 412
+D ++ +HL++
Sbjct: 167 TDLCQNGDNVIHLLI 181
Score = 56.4 bits (130), Expect = 9e-09
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 218 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 394
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 395 TLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
LHLV+RL I VRT+ GK L VE
Sbjct: 98 LLHLVIRLSDLQAISVRTVDGKEFELVVE 126
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 73.7 bits (173), Expect = 6e-14
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Frame = +2
Query: 29 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQ 205
SD+I VK +IQ G +Q+L+F+G++L + + DY + S LHLVL+L +
Sbjct: 53 SDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLL 112
Query: 206 IFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 379
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 380 IQKESTLHLVLR--LRGGMQIFVRTLTGKTITLE 475
S +HL+++ + ++ T TGK LE
Sbjct: 173 KDGNSVIHLLVKKSVEDTVKREEDTATGKDSLLE 206
Score = 55.2 bits (127), Expect = 2e-08
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 218 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 394
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 395 TLHLVLRLRGGMQIFVRTLTGKTITLEVE 481
LHLVL+L + + V T GK V+
Sbjct: 100 VLHLVLKLYDPLLVTVITTCGKVFQFHVD 128
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 67.7 bits (158), Expect = 4e-12
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = +2
Query: 29 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 208
++++E +K + D + + Q+ + + + E+ R+LS S RL QI
Sbjct: 42 AESLEMLKKQEIDADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL----QI 97
Query: 209 FVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 385
FV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+
Sbjct: 98 FVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIE 157
Query: 386 KESTLHLVLRLR 421
++++L LV R++
Sbjct: 158 QDASLQLVARMQ 169
Score = 50.4 bits (115), Expect = 6e-07
Identities = 22/62 (35%), Positives = 42/62 (67%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+ + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV R
Sbjct: 108 IVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVAR 167
Query: 188 LR 193
++
Sbjct: 168 MQ 169
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 7e-12
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 380 IQKESTLHLVLR 415
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 56.8 bits (131), Expect = 7e-09
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+++ TLHL++R
Sbjct: 37 TFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.4 bits (125), Expect = 4e-08
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 376
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 377 NIQKESTLHLVLRLRGGMQIFVRTLTG 457
Q ++T++LVL LRGG F L G
Sbjct: 67 --QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +2
Query: 41 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT 220
E +K +I ++ IP QRLI G Q+ DG +S Q ++T++LVL LRGG F
Sbjct: 33 EQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGGKGGFGSL 88
Query: 221 LTG 229
L G
Sbjct: 89 LRG 91
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 9e-08
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 373
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 374 YNIQKESTLHLVL 412
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +2
Query: 212 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 391
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 392 STLHLV 409
T+H+V
Sbjct: 82 HTIHMV 87
Score = 48.0 bits (109), Expect = 3e-06
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 35 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 39 TVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 370
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 371 DYNIQKESTLHLVLRLRGG 427
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLSDYNIQKESTLHLVL 184
+EVE + TI ++K KI D G+ Q L GK ++ G T+ DY I+ H+
Sbjct: 15 VEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDIFHMSD 74
Query: 185 RLRGG 199
R+RGG
Sbjct: 75 RMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 5e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 380 IQKESTLHL 406
I ES L L
Sbjct: 61 ILFESRLLL 69
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
++ ++ +T+ +K KI+ +GIP +Q L GK LED DY I ES L L
Sbjct: 14 SITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +2
Query: 212 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 391
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 392 STLHLV 409
T+H+V
Sbjct: 82 HTVHMV 87
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 35 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 39 TVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 50.4 bits (115), Expect = 6e-07
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 182 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDG 358
L RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D
Sbjct: 655 LPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDE 714
Query: 359 RTLSDYNIQKESTLHLV 409
++L+ N+Q S +HL+
Sbjct: 715 KSLAAQNVQPNSLVHLI 731
Score = 33.5 bits (73), Expect = 0.076
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
L V +++ +++AK K + ++ + GK+L+D ++L+ N+Q S +HL+
Sbjct: 675 LHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 380 IQKESTLHLVL 412
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/59 (28%), Positives = 38/59 (64%)
Frame = +2
Query: 8 VTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+TL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS ++ + L +++
Sbjct: 13 ITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGVKDDDLLMMMV 71
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 49.6 bits (113), Expect = 1e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 116 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 280
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 281 AKIQDKEGIPP 313
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 36.3 bits (80), Expect = 0.011
Identities = 24/51 (47%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +2
Query: 344 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVRTLTGKTITLEVE 481
+LED D I E T LVL L G M IFV TL GKT LEV+
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVK 66
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVE-ASDTIE 271
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 376
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 377 NIQKESTLHLV 409
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/58 (37%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 24 TLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 376
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 377 NIQKESTLHLVLRLRGG 427
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 41 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 199
E +K +I ++ IP QRLI G Q+ +S Q ++T++LVL LRGG
Sbjct: 33 EQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNLVLSLRGG 81
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 380 IQKESTL 400
I ES L
Sbjct: 61 ILFESLL 67
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 172
++ ++ +T+ +K KI+ +GIP +Q L GK LED DY I ES L
Sbjct: 14 SITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 380 IQKESTLHL 406
I + LHL
Sbjct: 61 ILQNPLLHL 69
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
++++ DT+ K KI+ + IP +Q + F GK LED + +++I + LHL
Sbjct: 14 SIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 6e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 370
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 371 DYNIQKESTLHLVL 412
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 6e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 370
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 371 DYNIQKESTLHLVL 412
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 370
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 371 DYNIQKESTLHLVL 412
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+ V PSDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 370
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 371 DYNIQKESTLHLVL 412
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+ V PSDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 370
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 371 DYNIQKESTLHLVL 412
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+ V PSDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 370
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 371 DYNIQKESTLHLVL 412
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+ V P+DTI VK I+D K+ P QQ LI GK L+D TL + + +E L ++L
Sbjct: 15 IRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVML 74
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 380 IQKESTLHLVL----RLRGGMQIF 439
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
Score = 33.9 bits (74), Expect = 0.058
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 11 TLEVEPS--DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
T E+E DT+ +K KI+ + IP +Q L+F G L+D + I S + L +
Sbjct: 12 TFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNHSRIQLSI 71
Query: 185 ----RLRGGMQIF 211
+ R +Q+F
Sbjct: 72 SSPDQSRNNIQVF 84
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 376
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 377 NIQKESTLHLVLRLRGGMQIFVRTLTGKTITL 472
N+Q S +HL LR + + + + L G+ +L
Sbjct: 560 NVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 190
L V +++ ++KAK K + ++ + GK+LED ++L++ N+Q S +HL LR
Sbjct: 514 LTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNSLVHL-LRT 572
Query: 191 RGGMQIFVKTLTGKTITL 244
+ + + + L G+ +L
Sbjct: 573 KVHLWPWAQKLPGENKSL 590
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 7e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 380 IQKESTLHL 406
I+ S + L
Sbjct: 62 IRHNSRILL 70
Score = 33.5 bits (73), Expect = 0.076
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
T++V DT+ +K KI+ +G P +Q LIF K L+D + I+ S + L
Sbjct: 15 TIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.9 bits (89), Expect = 9e-04
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 380 IQKESTLHL 406
I+ S + L
Sbjct: 96 IRHNSRILL 104
Score = 33.5 bits (73), Expect = 0.076
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 11 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
T++V DT+ +K KI+ +G P +Q LIF K L+D + I+ S + L
Sbjct: 49 TIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 104
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 355
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 32 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 127
DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 21 DTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 227 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 406
GK+I L V T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 407 V 409
+
Sbjct: 604 M 604
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 340
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 29.9 bits (64), Expect = 0.94
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 112
+EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 15 IEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.006
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 200 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 340
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 112
LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 15 LEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 227 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 403
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 404 LVLRLRGG 427
L LR RGG
Sbjct: 775 LSLRERGG 782
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +2
Query: 5 EVTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
E+T++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L L
Sbjct: 719 EITVQ-SLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSL 777
Query: 185 RLRGG 199
R RGG
Sbjct: 778 RERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 242 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 355
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 34.7 bits (76), Expect = 0.033
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 2 HEVTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 127
H L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 79 HFHDLSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 194 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 364
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.044
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 212 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 355
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 29.9 bits (64), Expect = 0.94
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 14 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 127
+ ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 93 ISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.10
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 242 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 400
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
Score = 32.7 bits (71), Expect = 0.13
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +2
Query: 14 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 178
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I KE++ L
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKIL 72
Query: 179 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 283
R + GK+I E E + + VKA
Sbjct: 73 SCRQAAPEE-------GKSIMAEEERARRLSRVKA 100
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 31.5 bits (68), Expect = 0.31
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 5 EVTLEVEPSDTIENVKAKIQDKEGIPPD 88
++ +E++P D IE +K I+++ GIP D
Sbjct: 54 KIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 0.54
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 125 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 301
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.71
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +2
Query: 29 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 169
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 170 LHLVLRL 190
+H+VLRL
Sbjct: 88 MHIVLRL 94
Score = 30.3 bits (65), Expect = 0.71
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +2
Query: 257 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 397
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 398 LHLVLRL 418
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g80120.1 68414.m09378 expressed protein contains Pfam profile
PF04525: Protein of unknown function (DUF567)
Length = 210
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 121 ELFAGEDKTLLIRRNTFFVLNFSFYIFNCVRRLNFECD 8
E GE+++L +R+ + F F +++C L F D
Sbjct: 10 EFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVD 47
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 23 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 251 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 406
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +2
Query: 206 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 355
+F+ GKT++++V S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 356 GRTLSDYNIQKESTLHLVLRLRGGMQ 433
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 27.9 bits (59), Expect = 3.8
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 17 EVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 190
E EP D T+E+ AK + EG + I + DG D+ +Q+ S+ +V
Sbjct: 106 EEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSFQMVEGS 165
Query: 191 RGGMQIFVKTLTGKTITLEVEASD--TIENVKAKIQDKEGIPPDQQR 325
GG GK + +EA D + K I+++E ++R
Sbjct: 166 MGG-----GVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRER 207
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +2
Query: 98 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 277
L+ AG LE + + +++ ++ L +V R G + VKT G + +V T+ +
Sbjct: 455 LVGAGLLLESNKKVYMHDMIRDMALWIVSEFRDGERYVVKTDAGLSQLPDVTDWTTVTKM 514
Query: 278 KAKIQDKEGIPPDQQ 322
+ + IP D +
Sbjct: 515 SLFNNEIKNIPDDPE 529
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 221 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 358
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At1g69650.1 68414.m08015 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 294
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -3
Query: 172 KCRFFLNVVIGKSATVFELFAGEDKTLLIRRNTFFVLNFS 53
+C F ++V++ T +E+ + D+ L + T+ V NFS
Sbjct: 128 ECEFGVDVIVAPPLTNWEILSFHDEKLSYPKVTWSVKNFS 167
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,973,605
Number of Sequences: 28952
Number of extensions: 159706
Number of successful extensions: 777
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -