Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B04
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 112 4e-24
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 95 4e-19
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 94 1e-18
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 83 3e-15
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 75 5e-13
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 74 1e-12
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 74 2e-12
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 72 5e-12
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 71 1e-11
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 66 4e-10
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 61 1e-08
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 57 1e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 56 4e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 48 9e-05
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 47 2e-04
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 47 2e-04
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 47 2e-04
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 45 8e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 44 0.001
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 42 0.004
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 39 0.041
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 38 0.071
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 38 0.071
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 36 0.38
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 36 0.38
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 36 0.50
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 36 0.50
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 35 0.66
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 0.66
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 2.7
UniRef50_A5FDV1 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_Q0Q476 Cluster: Replicase polyprotein 1ab (pp1ab) (ORF1... 32 6.2
UniRef50_Q0DCX5 Cluster: Os06g0276300 protein; n=5; Oryza sativa... 31 8.1
UniRef50_Q75JE5 Cluster: Similar to Plasmodium falciparum (Isola... 31 8.1
UniRef50_Q54RH5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_Q4XHA0 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 31 8.1
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 112 bits (269), Expect = 4e-24
Identities = 55/74 (74%), Positives = 57/74 (77%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2 GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61
Query: 188 IHSQVRGISIKLQE 229
HSQVRGISIKLQE
Sbjct: 62 RHSQVRGISIKLQE 75
Score = 93.9 bits (223), Expect = 1e-18
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGG 395
+ ++EERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T G
Sbjct: 71 IKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FG 128
Query: 396 RRN 404
RRN
Sbjct: 129 RRN 131
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 95.5 bits (227), Expect = 4e-19
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 2e-15
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 93.9 bits (223), Expect = 1e-18
Identities = 43/74 (58%), Positives = 54/74 (72%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YY+R+TLDF TNK++ EE++I+P+K LRNK+AGFTTHLMRR+
Sbjct: 2 GRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGIS+KLQE
Sbjct: 62 QRGPVRGISLKLQE 75
Score = 49.2 bits (112), Expect = 4e-05
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGY 389
L ++EERERR ++VPE SALE + I VD +T +ML L +++ G++ Q + Y
Sbjct: 71 LKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSAPTY 128
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 82.6 bits (195), Expect = 3e-15
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQE 229
YYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R+ VRGISIKLQE
Sbjct: 75 YYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQE 130
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPE SAL+Q+IIEVD DTK ML + F ++ Q TQP
Sbjct: 126 IKLQEEERERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 75.4 bits (177), Expect = 5e-13
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
G++RT YY++L DF NKR+ ++ I +K L+NKIAG+TTH+M+RL
Sbjct: 2 GKIRTKTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRL 61
Query: 188 IHSQVRGISIKLQE 229
VRGIS+KLQE
Sbjct: 62 ARGPVRGISLKLQE 75
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 74.1 bits (174), Expect = 1e-12
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQE 229
Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL +++ VRGISIKLQE
Sbjct: 57 YHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQE 112
Score = 68.9 bits (161), Expect = 4e-11
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+S K +E ERR +Y+PEVSAL+Q+I EVD TK+MLK+LD +++ LQ+TQP
Sbjct: 106 ISIKLQEEERRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 73.7 bits (173), Expect = 2e-12
Identities = 29/55 (52%), Positives = 45/55 (81%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQ 380
+ ++EERE RDNYVPE+S L+Q+ +EVD DTK+ML++LDF +++ LQ+T+P +
Sbjct: 71 IKLQEEERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
Score = 68.1 bits (159), Expect = 8e-11
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQE 229
Y TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+ VRGISIKLQE
Sbjct: 21 YCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQE 75
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 72.1 bits (169), Expect = 5e-12
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQE 229
YY +LT DF NK+I E+ +P+K LRNKIAGF THL++R+ V+GIS+K+QE
Sbjct: 60 YYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQE 115
Score = 38.7 bits (86), Expect = 0.054
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLK 326
L ++EERERR +YVPE S+++ D + D D K ML+
Sbjct: 111 LKIQEEERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 70.5 bits (165), Expect = 1e-11
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ +++ERER+DNYVPE+SA +Q+ IEVD DTK+M K+L+F +++ LQ+TQP
Sbjct: 125 IKLQEKERERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQER 232
YYT L +F +NKR CEE II +K L NKI G+ HLM+R+ VRGISIKLQE+
Sbjct: 74 YYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEK 130
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 65.7 bits (153), Expect = 4e-10
Identities = 27/43 (62%), Positives = 39/43 (90%)
Frame = +3
Query: 243 RRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+++ YVPEVSAL+Q+IIEVD DT++MLK+LDF +++ LQ+TQP
Sbjct: 122 KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
Score = 56.0 bits (129), Expect = 3e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R+
Sbjct: 69 HYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRI 110
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
G+VRT Y+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 2 GKVRTKTIKRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEF 61
Query: 188 IHSQVRGI 211
+ + I
Sbjct: 62 FKGKKKKI 69
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 57.2 bits (132), Expect = 1e-07
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GR+R Y T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L
Sbjct: 2 GRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQL 61
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 55.6 bits (128), Expect = 4e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +3
Query: 264 EVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+VSAL+Q++IEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 48.0 bits (109), Expect = 9e-05
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMR 181
G+VR Y LT DF+ NK++ E +A TK LRN IAG+ THLMR
Sbjct: 2 GKVRPTFVKRPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMR 59
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +3
Query: 198 RCEESLLSFKKEERERRD--NYVPEVSALEQDIIEVDSDTKDMLKMLDFSNIN 350
R +S +S R RRD NYVPE S L+Q+I EVD+ TK+MLK+ F +++
Sbjct: 62 RGSDSQVSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
Score = 45.2 bits (102), Expect = 6e-04
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GR+ T YY L DF +K +C+EI I ++ L +KIAG+ THLM+ +
Sbjct: 2 GRICTKILKKVAWVITEKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEI 61
Query: 188 --IHSQVRGISIKLQER 232
SQV S + + R
Sbjct: 62 RGSDSQVSPSSCRRRRR 78
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 178
G +RT + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 2 GNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 184
G VR+ Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR
Sbjct: 2 GNVRSKLVKRTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRR 60
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 44.8 bits (101), Expect = 8e-04
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQE 229
Y+ RL FD N + +++A++ +K L+N+IAG+ T L ++++ + IK E
Sbjct: 20 YFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHE 75
Score = 39.9 bits (89), Expect = 0.023
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 228 KEERERRDNYVPEVSALEQDIIEVDSDTKDMLK 326
+EERER++N +P+ S L+ D +EVD T +M+K
Sbjct: 75 EEERERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTH 172
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKML 332
L ++EERERR ++VPE S ++ +I+VD DT DML L
Sbjct: 84 LKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFL 122
Score = 33.1 bits (72), Expect = 2.7
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 161 FTTHLMRRLIHSQVRGISIKLQE 229
F HLMRR+ VRGIS+KLQE
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQE 88
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 42.3 bits (95), Expect = 0.004
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMR 181
G+VR Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R
Sbjct: 2 GKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIR 59
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 39.1 bits (87), Expect = 0.041
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 178
G+VR Y T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 2 GKVRIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 38.3 bits (85), Expect = 0.071
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 65 YTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
YT L+ D K +C+EI I P+K L KIAGF LM+++
Sbjct: 38 YTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQI 77
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.3 bits (85), Expect = 0.071
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQ 199
DF NK+I E++I+ +K L+N+IAG+ T+ +++ I +
Sbjct: 22 DFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREE 60
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 35.9 bits (79), Expect = 0.38
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHS 196
DF+ NK + EE+ I +K +RN+IAG+ T M + +
Sbjct: 26 DFEHNKDVVEELTNIESKGVRNRIAGYVTRKMNNPVEA 63
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.9 bits (79), Expect = 0.38
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 77 TLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 184
T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 25 TGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 35.5 bits (78), Expect = 0.50
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 178
DF NK E++A + TK +RN+IAG+ T M
Sbjct: 27 DFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 35.5 bits (78), Expect = 0.50
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 77 TLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
T DF+TNK + + I +K +RN++AG+ T + R+
Sbjct: 25 TKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARM 61
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.1 bits (77), Expect = 0.66
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 77 TLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 172
T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 24 TDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.1 bits (77), Expect = 0.66
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTT 169
+FD NK++ EI I +K +RN++AG+ T
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTH 172
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_A5FDV1 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 380
Score = 31.9 bits (69), Expect = 6.2
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 207 ESLLSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 335
+ +LSF+KE + NY+ E++ LE ++I + D+L ++D
Sbjct: 239 KEILSFRKETEQIYQNYIIEINKLEAELIR-SGEEIDLLYLMD 280
>UniRef50_Q0Q476 Cluster: Replicase polyprotein 1ab (pp1ab) (ORF1ab
polyprotein) [Includes: Replicase polyprotein 1a (pp1a)
(ORF1A)] [Contains: Non-structural protein 1 (nsp1)
(Leader protein); Non-structural protein 2 (nsp2) (p65
homolog); Non-structural protein 3 (EC 3.4.22.-) (nsp3)
(Papain- like proteinase) (PL-PRO) (PL2-PRO);
Non-structural protein 4 (nsp4); 3C-like proteinase (EC
3.4.22.-) (3CL-PRO) (3CLp) (nsp5); Non- structural
protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-
structural protein 8 (nsp8); Non-structural protein 9
(nsp9); Non- structural protein 10 (nsp10) (Growth
factor-like peptide) (GFL); RNA- directed RNA polymerase
(EC 2.7.7.48) (RdRp) (Pol) (nsp12); Helicase (Hel)
(nsp13); Exoribonuclease (EC 3.1.13.-) (ExoN) (nsp14);
Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU)
(nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-)
(nsp16)]; n=183; Coronavirus|Rep: Replicase polyprotein
1ab (pp1ab) (ORF1ab polyprotein) [Includes: Replicase
polyprotein 1a (pp1a) (ORF1A)] [Contains: Non-structural
protein 1 (nsp1) (Leader protein); Non-structural protein
2 (nsp2) (p65 homolog); Non-structural protein 3 (EC
3.4.22.-) (nsp3) (Papain- like proteinase) (PL-PRO)
(PL2-PRO); Non-structural protein 4 (nsp4); 3C-like
proteinase (EC 3.4.22.-) (3CL-PRO) (3CLp) (nsp5); Non-
structural protein 6 (nsp6); Non-structural protein 7
(nsp7); Non- structural protein 8 (nsp8); Non-structural
protein 9 (nsp9); Non- structural protein 10 (nsp10)
(Growth factor-like peptide) (GFL); RNA- directed RNA
polymerase (EC 2.7.7.48) (RdRp) (Pol) (nsp12); Helicase
(Hel) (nsp13); Exoribonuclease (EC 3.1.13.-) (ExoN)
(nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-)
(NendoU) (nsp15); Putative 2'-O-methyl transferase (EC
2.1.1.-) (nsp16)] - Bat coronavirus 279/2005 (BtCoV)
(BtCoV/279/2005)
Length = 7079
Score = 31.9 bits (69), Expect = 6.2
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 267 VSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 365
VSA Q +++ D DTKD+++ L S+ + L++T
Sbjct: 2617 VSAARQGVVDTDVDTKDVIECLKLSHHSDLEVT 2649
>UniRef50_Q0DCX5 Cluster: Os06g0276300 protein; n=5; Oryza
sativa|Rep: Os06g0276300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 942
Score = 31.5 bits (68), Expect = 8.1
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 204 EESLLSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGL 356
E LL+FKK E E+ N+V E + I E ++ K +L +N+N L
Sbjct: 704 ESRLLTFKKGEFEQLKNFVVEGPNMTDIIFEKEAAPKLQKIVLSLTNVNSL 754
>UniRef50_Q75JE5 Cluster: Similar to Plasmodium falciparum (Isolate
3D7). Asparagine-rich protein, putative; n=2;
Dictyostelium discoideum|Rep: Similar to Plasmodium
falciparum (Isolate 3D7). Asparagine-rich protein,
putative - Dictyostelium discoideum (Slime mold)
Length = 1048
Score = 31.5 bits (68), Expect = 8.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 220 LNRDSSHLGVYETSHQMGGEPSNFVAKRLSRNDSNFLTYPFIGIEVKSKP-SVVFFDYNL 44
+N HL + ++ Q SN + + ++D NF FI E+K + +++ DY++
Sbjct: 458 INIKDGHLNIVNSTFQSNIHWSNNLIRIKEKSDINFTNTLFINNEIKKENFNLISIDYSI 517
Query: 43 RRF 35
RF
Sbjct: 518 LRF 520
>UniRef50_Q54RH5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 656
Score = 31.5 bits (68), Expect = 8.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 186 SYTPRCEESLLSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDM 320
S+ R E+ L KKE++E+ D + + +++ EVD D + +
Sbjct: 463 SFLKRQEKRLAKEKKEQKEKEDGIIDSTTTIKESEPEVDEDLRKL 507
>UniRef50_Q4XHA0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 214
Score = 31.5 bits (68), Expect = 8.1
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = +3
Query: 204 EESLLSFKKE---ERERRDNYVPEVSALEQDIIEVDSDTKDMLKML-DFSNIN 350
E+S KKE ERE+RDN + E+ L++ I +++ + ++ K + D SN N
Sbjct: 142 EKSNEQVKKENSVEREKRDNLLIELKILKKKIHKIEKNKNELNKCVDDISNFN 194
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 31.5 bits (68), Expect = 8.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 184
Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 34 YEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,568,658
Number of Sequences: 1657284
Number of extensions: 6956214
Number of successful extensions: 18589
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 18218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18586
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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