Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B04
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 97 3e-20
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 97 3e-20
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 97 3e-20
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 97 3e-20
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 97 3e-20
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 97 3e-20
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 97 3e-20
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 97 3e-20
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 97 3e-20
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 97 3e-20
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 80 4e-15
DQ165873-1|ABA71393.1| 122|Homo sapiens immunoglobulin kappa ch... 32 1.00
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 30 4.0
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 30 4.0
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 30 4.0
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 30 4.0
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 30 4.0
DQ187576-1|ABA26112.1| 112|Homo sapiens immunoglobulin light ch... 29 7.0
U21043-1|AAA69063.1| 107|Homo sapiens immunoglobulin light chai... 29 9.3
DQ187616-1|ABA26152.1| 112|Homo sapiens immunoglobulin light ch... 29 9.3
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
Score = 83.4 bits (197), Expect = 3e-16
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++EERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 71 IKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 79.8 bits (188), Expect = 4e-15
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = +3
Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ ++E RERRDNYVPE+SAL+Q+IIEVD DTK+MLK+LDF ++ LQ+TQP
Sbjct: 71 IKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
Score = 76.6 bits (180), Expect = 4e-14
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
G V T YY L DF TNK +C+EIAIIP+K L NK AG+ THLM+++
Sbjct: 2 GHVCTKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQI 61
Query: 188 IHSQVRGISIKLQE 229
VRGISIKLQE
Sbjct: 62 QRGPVRGISIKLQE 75
>DQ165873-1|ABA71393.1| 122|Homo sapiens immunoglobulin kappa chain
variable region protein.
Length = 122
Score = 31.9 bits (69), Expect = 1.00
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -1
Query: 346 MLLKSSIFNISLVSESTSMISCSSADXXXXXXXXXXXXSFLKLNRDSSHLGVYETSHQMG 167
+++ S ++S+ + ISC S+ +L+ + + HL +YE S++
Sbjct: 3 IVMTQSPLSLSVTPGQPASISCKSSQSLLHRDGKTYLQWYLQKSGQAPHLLIYEVSNRFS 62
Query: 166 GEPSNF 149
G P F
Sbjct: 63 GVPDRF 68
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 225 KKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 335
++EE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 225 KKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 335
++EE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 225 KKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 335
++EE E + Y P LEQ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 225 KKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 335
++EE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 225 KKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 335
++EE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>DQ187576-1|ABA26112.1| 112|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 112
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = -1
Query: 346 MLLKSSIFNISLVSESTSMISCSSADXXXXXXXXXXXXSFLKLNRDSSHLGVYETSHQMG 167
++L S ++S+ + ISC S+ +L+ S L +YE S +
Sbjct: 2 IVLTQSPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQSPQLLIYEVSSRFS 61
Query: 166 GEPSNF 149
G P F
Sbjct: 62 GVPDRF 67
>U21043-1|AAA69063.1| 107|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 107
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = -1
Query: 346 MLLKSSIFNISLVSESTSMISCSSADXXXXXXXXXXXXSFLKLNRDSSHLGVYETSHQMG 167
++L + ++S+ + ISC S+ +L+ S L +YE S++
Sbjct: 2 IVLTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYFYWYLQKPGQSPQLLIYEVSNRFS 61
Query: 166 GEPSNF 149
G P F
Sbjct: 62 GVPDRF 67
>DQ187616-1|ABA26152.1| 112|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 112
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -1
Query: 346 MLLKSSIFNISLVSESTSMISCSSADXXXXXXXXXXXXSFLKLNRDSSHLGVYETSHQMG 167
+++ S ++S+ + ISC S+ +L+ S L +YE S +
Sbjct: 2 IVMTQSPLSLSVTPGQPASISCKSSQSLLHSDGKTYSYWYLQKPGQSPQLLIYEVSSRFS 61
Query: 166 GEPSNF 149
G P F
Sbjct: 62 GVPDRF 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,051,465
Number of Sequences: 237096
Number of extensions: 1063047
Number of successful extensions: 2407
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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