Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B04
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   112   2e-25
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   112   2e-25
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   112   2e-25
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   112   2e-25
L11451-1|AAA28918.1|  786|Drosophila melanogaster serine protein...    28   6.4  
AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p pro...    28   6.4  
AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA...    28   6.4  
DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.    27   8.4  
AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA...    27   8.4  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  112 bits (269), Expect = 2e-25
 Identities = 55/74 (74%), Positives = 57/74 (77%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKLQE 229
            HSQVRGISIKLQE
Sbjct: 62  RHSQVRGISIKLQE 75



 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 46/63 (73%), Positives = 52/63 (82%)
 Frame = +3

Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGG 395
           +  ++EERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     G
Sbjct: 71  IKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FG 128

Query: 396 RRN 404
           RRN
Sbjct: 129 RRN 131


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  112 bits (269), Expect = 2e-25
 Identities = 55/74 (74%), Positives = 57/74 (77%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKLQE 229
            HSQVRGISIKLQE
Sbjct: 62  RHSQVRGISIKLQE 75



 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 46/63 (73%), Positives = 52/63 (82%)
 Frame = +3

Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGG 395
           +  ++EERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     G
Sbjct: 71  IKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FG 128

Query: 396 RRN 404
           RRN
Sbjct: 129 RRN 131


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  112 bits (269), Expect = 2e-25
 Identities = 55/74 (74%), Positives = 57/74 (77%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKLQE 229
            HSQVRGISIKLQE
Sbjct: 62  RHSQVRGISIKLQE 75



 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 46/63 (73%), Positives = 52/63 (82%)
 Frame = +3

Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGG 395
           +  ++EERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     G
Sbjct: 71  IKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FG 128

Query: 396 RRN 404
           RRN
Sbjct: 129 RRN 131


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  112 bits (269), Expect = 2e-25
 Identities = 55/74 (74%), Positives = 57/74 (77%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKLQE 229
            HSQVRGISIKLQE
Sbjct: 62  RHSQVRGISIKLQE 75



 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 46/63 (73%), Positives = 52/63 (82%)
 Frame = +3

Query: 216 LSFKKEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGG 395
           +  ++EERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     G
Sbjct: 71  IKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FG 128

Query: 396 RRN 404
           RRN
Sbjct: 129 RRN 131


>L11451-1|AAA28918.1|  786|Drosophila melanogaster serine proteinase
           protein.
          Length = 786

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 327 SSTYPWCPNRLQ*YPVLAQILLGHNCHAFHAPLS*SLIE--IPRTWECMR 184
           SS +   P+RL+ YP L Q+  G N      P S   +E      WEC++
Sbjct: 106 SSGFYRIPHRLEGYPQLQQLQRGQNFKISPKPCSFGRVEGTCMFVWECIK 155


>AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p
           protein.
          Length = 683

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 327 SSTYPWCPNRLQ*YPVLAQILLGHNCHAFHAPLS*SLIE--IPRTWECMR 184
           SS +   P+RL+ YP L Q+  G N      P S   +E      WEC++
Sbjct: 2   SSGFYRIPHRLEGYPQLQQLQRGQNFKISPKPCSFGRVEGTCMFVWECIK 51


>AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA
           protein.
          Length = 787

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 327 SSTYPWCPNRLQ*YPVLAQILLGHNCHAFHAPLS*SLIE--IPRTWECMR 184
           SS +   P+RL+ YP L Q+  G N      P S   +E      WEC++
Sbjct: 106 SSGFYRIPHRLEGYPQLQQLQRGQNFKISPKPCSFGRVEGTCMFVWECIK 155


>DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.
          Length = 2765

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 234  ERERRDNYVPEVSALEQDIIEVDSDTKD 317
            ER R    +P++S L+QD ++V   TKD
Sbjct: 1924 ERVRDGLNLPDISHLKQDSLDVSESTKD 1951


>AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA
            protein.
          Length = 2958

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 234  ERERRDNYVPEVSALEQDIIEVDSDTKD 317
            ER R    +P++S L+QD ++V   TKD
Sbjct: 2117 ERVRDGLNLPDISHLKQDSLDVSESTKD 2144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,482,864
Number of Sequences: 53049
Number of extensions: 321044
Number of successful extensions: 887
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)