Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B02
(341 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 4e-12
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 33 0.046
SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_48272| Best HMM Match : HCO3_cotransp (HMM E-Value=0.0065) 30 0.43
SB_55692| Best HMM Match : HR1 (HMM E-Value=7.3) 29 0.99
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 28 1.7
SB_55931| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_15248| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-21) 27 3.0
SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05) 27 4.0
SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3) 27 4.0
SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_11324| Best HMM Match : Retinin_C (HMM E-Value=1.4) 27 5.3
SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22) 26 7.0
SB_41879| Best HMM Match : DUF1658 (HMM E-Value=7) 26 7.0
SB_37238| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 26 7.0
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 26 7.0
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_11613| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_22015| Best HMM Match : Tet_res_leader (HMM E-Value=4.6) 26 9.2
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_15662| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_7949| Best HMM Match : Na_Ca_ex (HMM E-Value=3.4) 26 9.2
>SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 66.9 bits (156), Expect = 4e-12
Identities = 30/94 (31%), Positives = 52/94 (55%)
Frame = +1
Query: 49 FEIHKTIWRIRTLKAKRVALQMPEGLTMFATTLCDIVETFTDADTVIMGDVTYGACCVDD 228
+EI +++ I + +VALQ P+ L + ++ ++E I+ D +YG+CCVD+
Sbjct: 52 YEIERSVQVITSSGFNKVALQFPDSLLADSASVARLIEQRASCKAFILADTSYGSCCVDE 111
Query: 229 FTAVALGVDLLVHYGHSCLIPIDQTNTIKVPYIF 330
A +L++HYG +CL QT + V Y+F
Sbjct: 112 IAAEHADAELIIHYGQACL---SQTKRLPVLYVF 142
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 33.5 bits (73), Expect = 0.046
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 260 SKSTPSATAVKSSTQHAPYVTSPIITVSASVNVSTISHNVVANIV 126
S S A +K + +H P +T II S S + T++H+V +++
Sbjct: 395 SASNAQAVKIKLTKKHVPCITFEIILPSLSAHTRTVTHDVPVSVI 439
>SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -1
Query: 245 SATAVKSSTQHAPYVTSPIITVSASVNVSTISHNVVANIVRPSGICKATLFAFRVRILHI 66
S ++ S +H+P+ S VS S V T+SH+ +R G+ +TLF LH
Sbjct: 93 SGHSLSKSVKHSPHCES----VSESSTVHTVSHHYEYTWLRNRGVDSSTLFEGTPLSLHA 148
Query: 65 VLCIS 51
+ IS
Sbjct: 149 DITIS 153
>SB_48272| Best HMM Match : HCO3_cotransp (HMM E-Value=0.0065)
Length = 202
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 261 KQVNTKCYSCKVIYTACSICDISHNNRVSISKC 163
KQ T Y V Y++C IC ++ + VS S+C
Sbjct: 96 KQELTNPYCIGVPYSSCGICGVAGSGNVSTSQC 128
>SB_55692| Best HMM Match : HR1 (HMM E-Value=7.3)
Length = 233
Score = 29.1 bits (62), Expect = 0.99
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -3
Query: 303 SLVNWYKTGMAIMYKQVNTKCYSCKVIYTACSICDISHNNRVSISK 166
S NW+K + +C+ C +I+ A IC + +SI+K
Sbjct: 7 SHTNWFKVKACLQ----RIRCFRCALIFKAKKICATTGRRNISITK 48
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = -3
Query: 243 CYSCKVIYTACSI--CD---ISHNNRVSISKCFYYIT*CSCK 133
CYSC+V++ +C + C + ++ RV+ C + CSC+
Sbjct: 136 CYSCRVVFCSCRVACCSCRVVCYSCRVACCSC--RVACCSCR 175
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -3
Query: 243 CYSCKVIYTACSICDISHNNRVSISKCFYYIT*CSCK 133
CYSC+V +C + + ++ RV+ C ++ SC+
Sbjct: 241 CYSCRVACCSCRV--VCYSCRVACCSCRVHMKCSSCR 275
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 243 CYSCKVIYTACSICDISHNNRVSISKCFYYIT*CSCK 133
CYSC+V +C + + RV S C + CSC+
Sbjct: 255 CYSCRVACCSCRVHMKCSSCRVVCSSC--RVACCSCR 289
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 243 CYSCKVIYTACSI--CD---ISHNNRVSISKCFYYIT*CSCK 133
CYSC+V++ +C + C + ++ RV C + CSC+
Sbjct: 199 CYSCRVVFCSCRVACCSCRVVCYSCRVVCYSC--RVACCSCR 238
>SB_55931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 276 MAIMYKQVNTKCYSCKVIYTACSI-CDISHNNRVSI 172
MA YK++ CY+C ++T + C S +N +++
Sbjct: 94 MAFAYKELRDVCYNCFALFTTWNFACVFSRSNGLNL 129
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -1
Query: 266 CTSKSTPSATAVKSST--QHAPYVTSP 192
CT +STPS A ST Q APY ++P
Sbjct: 204 CTGESTPSQQAPYQSTPSQRAPYQSTP 230
>SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 341 LISTNIYGTLIVLVWSIGIRQEWP*CTSKSTPSATAVKSSTQHAPYVTS 195
LI+T L+V S GIR EW + TA+ SS PY T+
Sbjct: 295 LIATKTPSDLLVEDRSRGIRLEWASAGLTTGSIPTAITSSEPSVPYSTT 343
>SB_15248| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-21)
Length = 325
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 251 TPSATAVKSSTQHAPYVTSPIITVSASV-NVSTISHNVVANIVRPSGICKATLFAFRVRI 75
TP A + H P VT+ + +ASV +++T+S I +P + T+ +++I
Sbjct: 106 TPQALKANNCLIHKPLVTARFVCYAASVFSIATLSVERWYAICQPFAAARKTVQKKKLKI 165
Query: 74 L 72
L
Sbjct: 166 L 166
>SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05)
Length = 656
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 260 SKSTPSATAVKSSTQHAPYVTSPIITV 180
S + S TA+ SST P T PIIT+
Sbjct: 439 SSVSSSKTAISSSTTSPPLSTFPIITI 465
>SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3)
Length = 166
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 260 SKSTPSATAVKSSTQHAPYVTSPIITV 180
S + S TA+ SST P T PIIT+
Sbjct: 125 SSVSSSKTAISSSTTSPPLSTFPIITI 151
>SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2484
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 318 NFDSISLVNWYK--TGMAIMYKQVNTKCYSCKVIYTACSICDI 196
+F S+ W+ T + Y V+ K + KV+ +AC+IC +
Sbjct: 1967 DFHSVPSSMWWAIITMTTVGYGDVSPKTWMGKVVGSACAICGV 2009
>SB_11324| Best HMM Match : Retinin_C (HMM E-Value=1.4)
Length = 770
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 217 CVDDFTAVALGVD-LLVHYGHSCLIPIDQTNT 309
C++DF + +D Y H C I +++TNT
Sbjct: 529 CINDFLENKIKIDPFSPEYEHLCNIEVEETNT 560
>SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22)
Length = 1709
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 297 VNWYKTGMAIMYKQVNTKCYSCKVIYTACSIC 202
V W T + + + Y C+V YT C C
Sbjct: 740 VLWRGTDLVYKPESLKVLLYKCEVAYTDCGTC 771
>SB_41879| Best HMM Match : DUF1658 (HMM E-Value=7)
Length = 180
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 263 TSKSTPSATAVKSSTQHAPYVTSPIITVSASVNVST 156
T + ++++V +S P VTSP+IT + N S+
Sbjct: 30 TISTEATSSSVSTSQDSTPEVTSPVITENKDSNKSS 65
>SB_37238| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1003
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 163 TFTDADTVIMGDVTYGACCVDDFT 234
TF DA G V Y CC DD T
Sbjct: 413 TFVDASIQGYGAVAYLVCCYDDNT 436
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -1
Query: 254 STPSATAVKSSTQHAPYV-----TSPIITVSASVNVSTISH 147
STPS T S+ H P V T P+ T S + VST SH
Sbjct: 376 STPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSH 416
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -1
Query: 254 STPSATAVKSSTQHAPYV-----TSPIITVSASVNVSTISH 147
STPS T S+ H P V T P+ T S + VST SH
Sbjct: 385 STPSHTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSH 425
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -1
Query: 254 STPSATAVKSSTQHAPYV-----TSPIITVSASVNVSTISH 147
STPS T S+ H P V T P+ T S + VST SH
Sbjct: 403 STPSHTPPVSTPSHTPPVSTPSHTPPVSTPSNTPPVSTPSH 443
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -1
Query: 254 STPSATAVKSSTQHAPYV-----TSPIITVSASVNVSTISH 147
STPS T S+ H P V T P+ T S + VST SH
Sbjct: 412 STPSHTPPVSTPSHTPPVSTPSNTPPVSTPSHTPPVSTPSH 452
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -1
Query: 254 STPSATAVKSSTQHAPYV-----TSPIITVSASVNVSTISH 147
STPS T S+ H P V T P+ T S + VST SH
Sbjct: 430 STPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSH 470
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -1
Query: 254 STPSATAVKSSTQHAPYV-----TSPIITVSASVNVSTISH 147
STPS T S+ H P V T P+ T S + VST SH
Sbjct: 439 STPSHTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSH 479
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 26.2 bits (55), Expect = 7.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 254 STPSATAVKSSTQHAPYV---TSPIITVSASVNVSTISHN 144
S SATA ++ H+ V T+PI + +S NVS SH+
Sbjct: 941 SCQSATATPLNSYHSSLVNPTTTPITSYQSSSNVSAGSHH 980
>SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1421
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 163 TFTDADTVIMGDVTYGACCVDDFT 234
TF DA G V Y CC DD T
Sbjct: 933 TFVDASIQGYGAVAYLVCCYDDNT 956
>SB_11613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = -1
Query: 263 TSKSTPSATAVKSSTQHAPYVTSPIITVSASVNVSTISHN 144
+S S + S+ H P +T I+ ++ ++N ++SH+
Sbjct: 10 SSSSLSPPPSPSSTNHHYPTITIIIVIITTTINQPSLSHH 49
>SB_22015| Best HMM Match : Tet_res_leader (HMM E-Value=4.6)
Length = 167
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 270 IMYKQVNTKCYSCKVIYTACSICDISHNNRVSISKCFY 157
I +KQ T+ V + S+ + S NNR ++KCF+
Sbjct: 66 ITHKQQRTQLKKSSVSLSTKSLNE-SRNNRTVVAKCFF 102
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 25.8 bits (54), Expect = 9.2
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = -1
Query: 263 TSKSTPSATAVKSSTQHAPYVTSPIITVSASVNVSTISHNVVANIVRPSGICKATLFAFR 84
T+K T A + T+ +P T+ + N S+ S V + + P G+ + L +R
Sbjct: 1804 TTKGTGPAARIMIRTEEDVPSVAP--TIIKAANQSSTSLTVQWSRI-PPGLTRGVLLGYR 1860
Query: 83 VRILHIVL 60
V HI++
Sbjct: 1861 VTYXHILV 1868
>SB_15662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 175 ADTVIMGDVTYGACCVDDFTAVALGVDLL 261
+D +++ DV G CC DD V GVD++
Sbjct: 49 SDVIMICDVDDGWCCYDD---VCAGVDVM 74
>SB_7949| Best HMM Match : Na_Ca_ex (HMM E-Value=3.4)
Length = 168
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 263 TSKSTPSATAVKSSTQHAPYVTSPIITVSASVNVSTISHNVVANIV 126
T+ +T +ATA ++T A + +TV+ +V V I +V IV
Sbjct: 115 TATATATATATATATATATATATATVTVTVTVTVIVIVIVIVIVIV 160
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,971,239
Number of Sequences: 59808
Number of extensions: 227697
Number of successful extensions: 639
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 498218920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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