Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B01
         (142 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)               44   2e-05
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)                38   0.001
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   0.26 
SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09)          29   0.60 
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   0.60 
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.4  

>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 331

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +2

Query: 8   VDASQTTFQFYSSGVYFD*NCSSTELEH 91
           +DASQ+TF FY  GVY D +CSST L+H
Sbjct: 251 IDASQSTFHFYHQGVYDDPDCSSTRLDH 278


>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
          Length = 1220

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +2

Query: 8   VDASQTTFQFYSSGVYFD*NCSSTELEH 91
           VDASQ  +QFYSSGVY +  CSST+L+H
Sbjct: 179 VDASQ--WQFYSSGVYDNPYCSSTQLDH 204


>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1512

 Score = 30.3 bits (65), Expect = 0.26
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 8   VDASQTTFQFYSSGVYFD*NCSSTELEH 91
           V+    TF+FY SG+Y+D  C+   L+H
Sbjct: 636 VNTQPKTFKFYGSGIYYDTQCTHA-LDH 662


>SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09)
          Length = 160

 Score = 29.1 bits (62), Expect = 0.60
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 8   VDASQTTFQFYSSGVYFD*NC 70
           ++A Q TF+FYS G+Y D  C
Sbjct: 45  LNADQKTFRFYSHGIYDDPKC 65


>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 859

 Score = 29.1 bits (62), Expect = 0.60
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +2

Query: 8   VDASQTTFQFYSSGVYFD*NC--SSTELEH 91
           +DAS  +  FYS GVY++  C   + +L+H
Sbjct: 777 IDASHKSLSFYSYGVYYEPKCGNKNEDLDH 806


>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 521

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 8   VDASQTTFQFYSSGVY 55
           +DA   +FQFY SGVY
Sbjct: 469 IDAGHMSFQFYHSGVY 484


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,673,959
Number of Sequences: 59808
Number of extensions: 27148
Number of successful extensions: 82
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 16,821,457
effective HSP length: 26
effective length of database: 15,266,449
effective search space used: 305328980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)