Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A22
         (271 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch...    29   2.0  
AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.              29   2.0  
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.     29   2.0  

>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
            protein.
          Length = 4024

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -3

Query: 128  HNSISKSIEMMISFKNNIQHVTGITHILKRP 36
            +N+ISK    ++ F+  I+H++ I+ ILK+P
Sbjct: 2303 YNNISKKPMNLVLFRFAIEHISRISRILKQP 2333


>AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.
          Length = 2536

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -3

Query: 128  HNSISKSIEMMISFKNNIQHVTGITHILKRP 36
            +N+ISK    ++ F+  I+H++ I+ ILK+P
Sbjct: 1028 YNNISKKPMNLVLFRFAIEHISRISRILKQP 1058


>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
          Length = 4031

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -3

Query: 128  HNSISKSIEMMISFKNNIQHVTGITHILKRP 36
            +N+ISK    ++ F+  I+H++ I+ ILK+P
Sbjct: 2310 YNNISKKPMNLVLFRFAIEHISRISRILKQP 2340


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,557,434
Number of Sequences: 237096
Number of extensions: 576586
Number of successful extensions: 630
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 76,859,062
effective HSP length: 67
effective length of database: 60,973,630
effective search space used: 1341419860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)