Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A20
         (289 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   0.74 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   0.98 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   2.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    22   5.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   5.2  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    21   6.9  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    21   9.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    21   9.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    21   9.1  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 255 PCTLPPRRGTVRSSSVDESSDTRHESSRGA 166
           P +   RRGT  S++++ ++  + E +RGA
Sbjct: 454 PSSTDIRRGTSNSNNINAATGQQQEPARGA 483


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 221 GRAQLMKALTQDMSPQGAHRT*TESPPHSQHQQE 120
           G+AQ  ++  Q   PQ   +   +  P SQ QQ+
Sbjct: 398 GQAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQ 431


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 206  MKALTQDMSPQGAHRT*TESPPHSQHQQE 120
            +  L  +M PQ  HR+  +     Q QQ+
Sbjct: 1284 LPGLASEMQPQQLHRSQQQQQQQQQQQQQ 1312


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 246 LPPRRGTVRSSSVDESSDTRHESSRGAPH 160
           L P +GT   +S  E+S T H++S    H
Sbjct: 594 LTPPKGTFFYASAVENSLTAHQASIATIH 622


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 176  QGAHRT*TESPPHSQHQQEAGGDS 105
            +GAH T    P   Q QQ+  G +
Sbjct: 1039 KGAHTTFAPGPCQQQQQQQYAGSN 1062


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = -2

Query: 258 DPCTLPPRRGTVRSSSVDESSDTRHESSRG 169
           D    PP     RS      S  R+ SSRG
Sbjct: 374 DSAKFPPSFRIARSYGSSNRSGLRYRSSRG 403


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -2

Query: 270 ARARDPCTLPPRRGTVRSSSVDESSDTRHESSRGAPH 160
           A   DP  +   +G +R  +VD  S  + +   G P+
Sbjct: 160 ANDNDPLVVNTDKGRIRGITVDAPSGKKVDVWLGIPY 196


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -2

Query: 270 ARARDPCTLPPRRGTVRSSSVDESSDTRHESSRGAPH 160
           A   DP  +   +G +R  +VD  S  + +   G P+
Sbjct: 160 ANDNDPLVVNTDKGRIRGITVDAPSGKKVDVWLGIPY 196


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -2

Query: 270 ARARDPCTLPPRRGTVRSSSVDESSDTRHESSRGAPH 160
           A   DP  +   +G +R  +VD  S  + +   G P+
Sbjct: 46  ANDNDPLVVNTDKGRIRGITVDAPSGKKVDVWLGIPY 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,364
Number of Sequences: 2352
Number of extensions: 4648
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17384760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)