Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A19
         (188 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    20   2.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   2.0  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    20   2.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   2.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    19   3.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   4.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    19   6.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    19   6.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    19   6.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    18   8.0  

>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = -2

Query: 184 QCLSST--CTPAGKSLR 140
           +CL  T  CTP+G+ L+
Sbjct: 43  ECLLGTGKCTPSGEELK 59



 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 80  CLEGSIRCTP 109
           CL G+ +CTP
Sbjct: 44  CLLGTGKCTP 53


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 92  SPLNND*SEPVHSDSMSPTVN 30
           SP  N    P H++ ++PT N
Sbjct: 42  SPHLNHAMHPYHANHVNPTAN 62


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 166 CTPAGKSLRAS 134
           CTP GK L+++
Sbjct: 51  CTPEGKKLKST 61


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 94  HKVYPSNYCAIAQVMLS-KTCQQVYTYWINTG 186
           HK+   N C I   +LS K+  Q++ Y  +TG
Sbjct: 129 HKLSDPNQCVICHRVLSCKSALQMH-YRTHTG 159


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -1

Query: 182 VFIQYVYTCWQVFESIT 132
           +F+ Y   CW  F  I+
Sbjct: 542 IFVTYQLYCWSSFLKIS 558


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 167 VYTCWQVFESIT 132
           +YTCW  F   T
Sbjct: 230 LYTCWSEFTQKT 241


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -1

Query: 161 TCWQVFESITC 129
           TCW+  +  TC
Sbjct: 884 TCWRECDKATC 894


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 4/14 (28%), Positives = 10/14 (71%)
 Frame = +1

Query: 136 MLSKTCQQVYTYWI 177
           ++  TC +V++ W+
Sbjct: 66  LIFNTCGEVFSAWV 79


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 40  LQLTLKHYKLV 8
           LQL L+HY+++
Sbjct: 233 LQLFLEHYEVI 243


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 40  LQLTLKHYKLV 8
           LQL L+HY+++
Sbjct: 159 LQLFLEHYEVI 169


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 135 DALKDLPAGVHVLD 176
           DA  D+PA  +VLD
Sbjct: 181 DAAYDVPAMSNVLD 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,824
Number of Sequences: 336
Number of extensions: 794
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 42
effective length of database: 108,473
effective search space used:  2169460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)