Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A19
(188 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02320.1 68418.m00155 myb family transcription factor (MYB3R5... 31 0.14
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 28 0.99
At5g40330.1 68418.m04893 myb family transcription factor contain... 27 1.7
At4g02580.1 68417.m00352 NADH-ubiquinone oxidoreductase 24 kDa s... 27 1.7
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 1.7
At3g27920.1 68416.m03483 trichome differentiation protein / GLAB... 27 1.7
At1g18960.1 68414.m02359 myb family transcription factor contain... 27 1.7
At5g14750.1 68418.m01731 myb family transcription factor (MYB66)... 27 2.3
At3g08980.1 68416.m01049 signal peptidase I family protein simil... 26 3.0
At1g68320.1 68414.m07804 myb family transcription factor (MYB62)... 26 3.0
At1g18570.1 68414.m02316 myb family transcription factor (MYB51)... 26 3.0
At2g47190.1 68415.m05894 myb family transcription factor (MYB2) ... 26 4.0
At5g65130.1 68418.m08193 AP2 domain-containing transcription fac... 25 5.3
At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3... 25 5.3
At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase, puta... 25 7.0
At3g30210.1 68416.m03811 myb family transcription factor (MYB121... 25 7.0
At3g06490.1 68416.m00753 myb family transcription factor (MYB108... 25 7.0
At5g49620.1 68418.m06140 myb family transcription factor (MYB78)... 25 9.3
At3g48920.1 68416.m05344 myb family transcription factor (MYB45)... 25 9.3
>At5g02320.1 68418.m00155 myb family transcription factor (MYB3R5)
contains Pfam profile: PF00249 myb-like DNA binding
domain; identical to cDNA putative c-myb-like
transcription factor MYB3R-5 (MYB3R5) GI:15375300
Length = 548
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 31 LTVGDIESEWTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
L G + WT ++S H++Y + + IA+V+ +T + +W
Sbjct: 173 LNPGIRKDAWTVEEESALMNSHRMYGNKWAEIAKVLPGRTDNAIKNHW 220
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 27.9 bits (59), Expect = 0.99
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 58 WTGSDQSLFRGLHKVYPSNYCAIAQVMLS--KTCQQVYTY 171
W ++SLF +++ N C IA+ +LS K+C +V+ Y
Sbjct: 535 WRPLEKSLFDKGVEIFGMNSCLIARNLLSGFKSCWEVFQY 574
>At5g40330.1 68418.m04893 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 219
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 58 WTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
+T ++ L LHK+ + + IA+ + +T QV YW
Sbjct: 70 FTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYW 108
>At4g02580.1 68417.m00352 NADH-ubiquinone oxidoreductase 24 kDa
subunit, putative similar to NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor
(EC 1.6.5.3) (EC 1.6.99.3) (Polypeptide II)
(Swiss-Prot:P04394) [Bos taurus]
Length = 255
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 43 DIESEWTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYWI 177
D+ E++ ++QS + + YPSNY A + L QQ W+
Sbjct: 44 DLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWL 88
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 52 SEWTGSDQSLFRGLHKVYPSNYCAIAQVMLS--KTCQQVYTY 171
+EW ++ L+ +++ N C IA+ +LS KTC V Y
Sbjct: 491 TEWNPIEKDLYLKGVEIFGRNSCLIARNLLSGLKTCLDVSNY 532
>At3g27920.1 68416.m03483 trichome differentiation protein /
GLABROUS1 protein (GL1) identical to trichome
differentiation protein GL1 SP:P27900 from [Arabidopsis
thaliana]; contains Pfam profile: PF00249 Myb-like
DNA-binding domain
Length = 228
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 49 ESEWTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
+ +T ++ L LHK+ + + IA+ + +T QV YW
Sbjct: 69 KGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYW 110
>At1g18960.1 68414.m02359 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
contains similarity to transcription factor GI:9759592
from [Arabidopsis thaliana]
Length = 307
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 40 GDIESEWTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
G +T D+ L +H S + IAQ + KT ++V +W
Sbjct: 57 GTKHESFTSEDEDLIIKMHAAMGSRWQLIAQHLPGKTEEEVKMFW 101
>At5g14750.1 68418.m01731 myb family transcription factor (MYB66) /
werewolf (WER) contains PFAM profile: Myb DNA binding
domain PF00249; identical to cDNA putative
transcription factor (MYB66) mRNA, partial cds
GI:3941491; identical to GP:9755743 myb transcription
factor werewolf (WER)/ MYB66 {Arabidopsis thaliana}
Length = 203
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 58 WTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
+T ++ L LHK+ + + IA+ + +T QV YW
Sbjct: 74 FTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYW 112
>At3g08980.1 68416.m01049 signal peptidase I family protein
similar to SP|P46972 Mitochondrial inner membrane
protease subunit 2 (EC 3.4.99.-) {Saccharomyces
cerevisiae}; contains Pfam profile PF00461: Signal
peptidase I
Length = 154
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 65 PVHSDSMSPTVNPK 24
PV DSMSPT NP+
Sbjct: 33 PVRGDSMSPTFNPQ 46
>At1g68320.1 68414.m07804 myb family transcription factor (MYB62)
similar to myb-related transcription factor (cpm7)
GI:1002799 from [Craterostigma plantagineum]; contains
PFAM profile: myb DNA binding domain PF00249
Length = 286
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 61 TGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
T +Q L LH + + + IAQ + +T ++ YW
Sbjct: 78 TPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYW 115
>At1g18570.1 68414.m02316 myb family transcription factor (MYB51)
contains PFAM profile: PF00249
Length = 352
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 55 EWTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
E+T ++ LH ++ + + AIA+ + +T ++ YW
Sbjct: 70 EFTEDEERSIISLHALHGNKWSAIARGLPGRTDNEIKNYW 109
>At2g47190.1 68415.m05894 myb family transcription factor (MYB2)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 273
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 61 TGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
T +Q + LH ++ + + IAQ + +T ++ YW
Sbjct: 79 TLEEQFMILKLHSLWGNRWSKIAQYLPGRTDNEIKNYW 116
>At5g65130.1 68418.m08193 AP2 domain-containing transcription
factor, putative similar to AP2 domain transcription
factor
Length = 277
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 31 LTVGDIESEWTGSDQSLFRGLHKVYPS 111
+T+ D S+ D+S GLHK YPS
Sbjct: 240 ITLLDFSSDCVKEDESFLMGLHK-YPS 265
>At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3)
contains Pfam profile: Myb DNA-binding proteins;
identical to cDNA putative c-myb-like transcription
factor (MYB3R3) GI:15375285
Length = 505
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 43 DIESE-WTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
DI + WT ++ H+ + + + IA+V+ +T + +W
Sbjct: 179 DINKDAWTTEEEVALMNAHRSHGNKWAEIAKVLPGRTDNAIKNHW 223
>At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase,
putative / long-chain acyl-CoA synthetase, putative
similar to acyl-CoA synthetase (MF7P) gi:1617270 from
Brassica napus
Length = 666
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 31 LTVGDIESEWTGSDQSLFRGLHKVYPSNYCAIAQVM 138
+ VG W G + L L ++ PS +CA+ +V+
Sbjct: 291 IQVGGSIGFWRGDVKLLIEDLGELKPSIFCAVPRVL 326
>At3g30210.1 68416.m03811 myb family transcription factor (MYB121)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain (2 copies)
Length = 276
Score = 25.0 bits (52), Expect = 7.0
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +1
Query: 61 TGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
T ++ + LH ++ + + IA+ + +T ++ YW
Sbjct: 86 TPQEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYW 123
>At3g06490.1 68416.m00753 myb family transcription factor (MYB108)
identical to transcription factor MYB108 GI:15375290
from [Arabidopsis thaliana]
Length = 323
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 61 TGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
T +Q L LH + + + IAQ + +T ++ YW
Sbjct: 78 TLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYW 115
>At5g49620.1 68418.m06140 myb family transcription factor (MYB78)
contains PFAM profile: myb DNA binding domain PF00249;
identical to cDNA putative transcription factor (MYB78)
mRNA, partial cds GI:3941509
Length = 307
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 61 TGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
T +Q L LH + + + IAQ + +T ++ YW
Sbjct: 85 TLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYW 122
>At3g48920.1 68416.m05344 myb family transcription factor (MYB45)
similar to MybHv33 GI:456214 from [Hordeum vulgare];
contains PFAM profile: myb DNA binding domain PF00249
Length = 261
Score = 24.6 bits (51), Expect = 9.3
Identities = 8/42 (19%), Positives = 23/42 (54%)
Frame = +1
Query: 49 ESEWTGSDQSLFRGLHKVYPSNYCAIAQVMLSKTCQQVYTYW 174
+S +T ++++ LH + + + I++ + +T ++ YW
Sbjct: 73 KSLFTKQEETILLSLHSMLGNKWSQISKFLPGRTDNEIKNYW 114
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,102,766
Number of Sequences: 28952
Number of extensions: 63912
Number of successful extensions: 174
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 12,070,560
effective HSP length: 42
effective length of database: 10,854,576
effective search space used: 217091520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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