Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A15
         (314 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   0.51 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    22   4.7  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    22   4.7  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    21   8.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    21   8.2  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    21   8.2  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    21   8.2  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 167 GQTVINPWCTIGGVATTICQPNEYI 241
           G+  I+ WC+  G    +C  NE I
Sbjct: 638 GEREISEWCSFHGCMGAVCNLNELI 662


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 236 IHWVGRLSWQPPR*Y 192
           +++ GR+ W+PP  Y
Sbjct: 130 LNYTGRVEWRPPAIY 144


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = -3

Query: 78  IFVETPSNINILSHSVTPMAYKSP 7
           ++  TP+N+  + H++    Y+ P
Sbjct: 386 LYQPTPANVRNVGHNIVLQGYRIP 409


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 185 PWCTIGG 205
           PWCT GG
Sbjct: 183 PWCTTGG 189


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 227 PNEYIVPDNAVMGD 268
           P+EY++P+N    D
Sbjct: 121 PSEYLIPNNITTSD 134


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 236 IHWVGRLSWQPP 201
           +H+ G++ W PP
Sbjct: 142 LHYTGKVIWTPP 153


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -3

Query: 270 TSPITALSGTMYSLGWQIVVATPPIVHHGLITVCPP 163
           T P T  + T Y+  +    + PP   H     CPP
Sbjct: 257 TDPTTTTT-TDYTTAYPPTTSEPPSTPHPTDPHCPP 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,072
Number of Sequences: 2352
Number of extensions: 7206
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)