SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A15
         (314 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U34044-1|AAA87567.1|  383|Homo sapiens selenium donor protein pr...   179   1e-45
BC063816-1|AAH63816.1|  392|Homo sapiens selenophosphate synthet...   179   1e-45
BC000941-1|AAH00941.1|  392|Homo sapiens selenophosphate synthet...   179   1e-45
AL355870-4|CAI14198.1|  392|Homo sapiens selenophosphate synthet...   179   1e-45
AL355870-3|CAI14197.1|  321|Homo sapiens selenophosphate synthet...   179   1e-45
AL138764-2|CAI12907.1|  392|Homo sapiens selenophosphate synthet...   179   1e-45
AL138764-1|CAI12908.1|  321|Homo sapiens selenophosphate synthet...   179   1e-45
U43286-1|AAC50958.2|  448|Homo sapiens selenophosphate synthetas...   166   1e-41
BC016643-1|AAH16643.1|  448|Homo sapiens selenophosphate synthet...   166   1e-41
BC002381-1|AAH02381.3|  448|Homo sapiens selenophosphate synthet...   166   1e-41
AK093889-1|BAC04245.1|  391|Homo sapiens protein ( Homo sapiens ...   166   1e-41
AK092003-1|BAC03787.1|  399|Homo sapiens protein ( Homo sapiens ...   163   1e-40
AL355870-2|CAI14196.1|  166|Homo sapiens selenophosphate synthet...   102   3e-22
AL355870-1|CAI14195.1|   92|Homo sapiens selenophosphate synthet...    89   3e-18
M64594-1|AAA63230.1|  610|Homo sapiens mucin protein.                  29   3.8  
AK131475-1|BAD18620.1|  832|Homo sapiens protein ( Homo sapiens ...    28   5.0  
AK057429-1|BAB71482.1|  452|Homo sapiens protein ( Homo sapiens ...    28   5.0  
Y11435-1|CAA72243.1|  245|Homo sapiens b4 integrin interactor pr...    27   8.8  
CR456764-1|CAG33045.1|  245|Homo sapiens ITGB4BP protein.              27   8.8  
BC019305-1|AAH19305.1|  245|Homo sapiens integrin beta 4 binding...    27   8.8  
BC011845-1|AAH11845.1|  245|Homo sapiens integrin beta 4 binding...    27   8.8  
BC001119-1|AAH01119.1|  245|Homo sapiens integrin beta 4 binding...    27   8.8  
AK130404-1|BAC85344.1|  120|Homo sapiens protein ( Homo sapiens ...    27   8.8  
AF289541-1|AAK39426.1|  243|Homo sapiens p27BBP protein protein.       27   8.8  
AF022229-1|AAB97735.1|  245|Homo sapiens translation initiation ...    27   8.8  
AB062289-1|BAB93472.1|  245|Homo sapiens integrin beta 4 binding...    27   8.8  

>U34044-1|AAA87567.1|  383|Homo sapiens selenium donor protein
           protein.
          Length = 383

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+NPW
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW 169

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAV 310
             +GGVATT+CQPNE+I+PDNAV GDVLV TKPLGTQVAV
Sbjct: 170 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAV 209


>BC063816-1|AAH63816.1|  392|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 392

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+NPW
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW 169

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAV 310
             +GGVATT+CQPNE+I+PDNAV GDVLV TKPLGTQVAV
Sbjct: 170 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAV 209


>BC000941-1|AAH00941.1|  392|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 392

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+NPW
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW 169

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAV 310
             +GGVATT+CQPNE+I+PDNAV GDVLV TKPLGTQVAV
Sbjct: 170 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAV 209


>AL355870-4|CAI14198.1|  392|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 392

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+NPW
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW 169

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAV 310
             +GGVATT+CQPNE+I+PDNAV GDVLV TKPLGTQVAV
Sbjct: 170 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAV 209


>AL355870-3|CAI14197.1|  321|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 321

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+NPW
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW 169

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAV 310
             +GGVATT+CQPNE+I+PDNAV GDVLV TKPLGTQVAV
Sbjct: 170 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAV 209


>AL138764-2|CAI12907.1|  392|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 392

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+NPW
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW 169

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAV 310
             +GGVATT+CQPNE+I+PDNAV GDVLV TKPLGTQVAV
Sbjct: 170 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAV 209


>AL138764-1|CAI12908.1|  321|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 321

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/100 (82%), Positives = 93/100 (93%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+NPW
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW 169

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAV 310
             +GGVATT+CQPNE+I+PDNAV GDVLV TKPLGTQVAV
Sbjct: 170 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAV 209


>U43286-1|AAC50958.2|  448|Homo sapiens selenophosphate synthetase 2
           protein.
          Length = 448

 Score =  166 bits (404), Expect = 1e-41
 Identities = 74/101 (73%), Positives = 90/101 (89%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMG+TECDNMLMLL VS  M+E+ER+ V PL+++GF+D+A E GT+VTGGQTV+NPW
Sbjct: 161 DLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPW 220

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAVN 313
             IGGVAT +CQPNE+I+PD+AV+GDVLV TKPLGTQVAVN
Sbjct: 221 IIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVN 261


>BC016643-1|AAH16643.1|  448|Homo sapiens selenophosphate synthetase
           2 protein.
          Length = 448

 Score =  166 bits (404), Expect = 1e-41
 Identities = 74/101 (73%), Positives = 90/101 (89%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMG+TECDNMLMLL VS  M+E+ER+ V PL+++GF+D+A E GT+VTGGQTV+NPW
Sbjct: 161 DLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPW 220

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAVN 313
             IGGVAT +CQPNE+I+PD+AV+GDVLV TKPLGTQVAVN
Sbjct: 221 IIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVN 261


>BC002381-1|AAH02381.3|  448|Homo sapiens selenophosphate synthetase
           2 protein.
          Length = 448

 Score =  166 bits (404), Expect = 1e-41
 Identities = 74/101 (73%), Positives = 90/101 (89%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMG+TECDNMLMLL VS  M+E+ER+ V PL+++GF+D+A E GT+VTGGQTV+NPW
Sbjct: 161 DLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPW 220

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAVN 313
             IGGVAT +CQPNE+I+PD+AV+GDVLV TKPLGTQVAVN
Sbjct: 221 IIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVN 261


>AK093889-1|BAC04245.1|  391|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36570 fis, clone TRACH2011302, highly similar to
           SELENIDE,WATER DIKINASE 2 (EC 2.7.9.3). ).
          Length = 391

 Score =  166 bits (404), Expect = 1e-41
 Identities = 74/101 (73%), Positives = 90/101 (89%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMG+TECDNMLMLL VS  M+E+ER+ V PL+++GF+D+A E GT+VTGGQTV+NPW
Sbjct: 104 DLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPW 163

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAVN 313
             IGGVAT +CQPNE+I+PD+AV+GDVLV TKPLGTQVAVN
Sbjct: 164 IIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVN 204


>AK092003-1|BAC03787.1|  399|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34684 fis, clone LIVER2005527, highly similar to
           SELENIDE,WATER DIKINASE 2 (EC 2.7.9.3). ).
          Length = 399

 Score =  163 bits (396), Expect = 1e-40
 Identities = 73/101 (72%), Positives = 89/101 (88%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPW 190
           DLYAMG+TECDNMLMLL VS  M+E+ER+ V PL+++GF+D+A E GT+VTGGQTV+NPW
Sbjct: 112 DLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPW 171

Query: 191 CTIGGVATTICQPNEYIVPDNAVMGDVLV*TKPLGTQVAVN 313
             IG VAT +CQPNE+I+PD+AV+GDVLV TKPLGTQVAVN
Sbjct: 172 IIIGEVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVN 212


>AL355870-2|CAI14196.1|  166|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 166

 Score =  102 bits (244), Expect = 3e-22
 Identities = 47/57 (82%), Positives = 54/57 (94%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVI 181
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSVTGGQTV+
Sbjct: 110 DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVL 166


>AL355870-1|CAI14195.1|   92|Homo sapiens selenophosphate synthetase
           1 protein.
          Length = 92

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = +2

Query: 11  DLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSV 160
           DLYAMGVTECDNMLMLLGVS KMT++ERD V+PLI++GFKD+A EAGTSV
Sbjct: 43  DLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSV 92


>M64594-1|AAA63230.1|  610|Homo sapiens mucin protein.
          Length = 610

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/92 (22%), Positives = 38/92 (41%)
 Frame = -3

Query: 279 HTSTSPITALSGTMYSLGWQIVVATPPIVHHGLITVCPPVTEVPASSAESLKPLMINGIT 100
           H ++ P+T  S    S    ++V     V  G  T  P VT+  ++S     PL +   +
Sbjct: 24  HATSLPVTDTSSASTSHATSLLVTDASSVSTGDTTPLP-VTDTSSASTGDTTPLHVTDAS 82

Query: 99  TSRSFSVIFVETPSNINILSHSVTPMAYKSPS 4
           +  +     +   S  ++ +   TP+   SPS
Sbjct: 83  SVSTGHATPLHVTSLSSVSTGDTTPLPVTSPS 114


>AK131475-1|BAD18620.1|  832|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16643 fis, clone TESTI4029528. ).
          Length = 832

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 127 ETPHDQRNYNIAFFFSHLCRNSE 59
           ET HD R   + FFF  LC  S+
Sbjct: 323 ETTHDDRRCELLFFFKELCSFSQ 345


>AK057429-1|BAB71482.1|  452|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32867 fis, clone TESTI2003727. ).
          Length = 452

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 127 ETPHDQRNYNIAFFFSHLCRNSE 59
           ET HD R   + FFF  LC  S+
Sbjct: 19  ETTHDDRRCELLFFFKELCSFSQ 41


>Y11435-1|CAA72243.1|  245|Homo sapiens b4 integrin interactor
           protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 161 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 211


>CR456764-1|CAG33045.1|  245|Homo sapiens ITGB4BP protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 161 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 211


>BC019305-1|AAH19305.1|  245|Homo sapiens integrin beta 4 binding
           protein protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 161 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 211


>BC011845-1|AAH11845.1|  245|Homo sapiens integrin beta 4 binding
           protein protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 161 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 211


>BC001119-1|AAH01119.1|  245|Homo sapiens integrin beta 4 binding
           protein protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 161 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 211


>AK130404-1|BAC85344.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26894 fis, clone RCT00440. ).
          Length = 120

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 175 SLSPCYRSTSF*RRIFETPHDQRNYNIAFFFSHL 74
           S SPC RS+ F +R+  TP+D   +  +  FS L
Sbjct: 41  SFSPCARSSWFGKRLDRTPNDSSVWEGSRSFSGL 74


>AF289541-1|AAK39426.1|  243|Homo sapiens p27BBP protein protein.
          Length = 243

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 159 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 209


>AF022229-1|AAB97735.1|  245|Homo sapiens translation initiation
           factor 6 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 161 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 211


>AB062289-1|BAB93472.1|  245|Homo sapiens integrin beta 4 binding
           protein protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 65  VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 217
           V  K + +++D +  L+        +  G+ V     V+N WC   G+ TT
Sbjct: 161 VHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTT 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,627,514
Number of Sequences: 237096
Number of extensions: 1099548
Number of successful extensions: 2385
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2385
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -