Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A13
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   0.69 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.5  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    20   8.5  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 48  CQRMHYFFETRKPQLKDKTQMQALERFLRLSLPCGMVW 161
           C R H +F   +P + DK       ++  ++ P G+V+
Sbjct: 107 CPRKHGYFAHEEPHICDKFYYCVDGKYNMITCPNGLVY 144


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -3

Query: 213 SFFATSVFCLYTLLCSESRPSHMEATILETSPKLAFGFCPLI 88
           +F A  V+C  T        + +  +IL     L  GFC  I
Sbjct: 45  TFVAALVYCSVTFFALSELLTDLATSILLKVSSLLIGFCASI 86


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 237  TELAWYRRAVNK 272
            T  AWYR+ V K
Sbjct: 1830 TNWAWYRQGVGK 1841


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 78  RKPQLKDKTQMQALERFLRLSL 143
           RKP   +  +M+ LER ++ SL
Sbjct: 52  RKPTYNNLQEMKYLERAIKESL 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,521
Number of Sequences: 336
Number of extensions: 2147
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)