Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A13
(419 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 47 7e-06
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 46 1e-05
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 45 2e-05
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 44 4e-05
02_03_0176 + 16010806-16011095,16011983-16012061,16012389-160124... 44 5e-05
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 35 0.023
09_06_0203 + 21555747-21555805,21555862-21555939,21556034-215560... 33 0.093
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 31 0.28
02_05_0104 - 25858414-25858509,25858711-25858782,25859081-258591... 31 0.28
12_02_1152 + 26515422-26515460,26516317-26516454,26518647-265188... 31 0.50
06_03_1487 + 30477615-30477658,30477778-30477891,30477941-304780... 30 0.87
03_05_0506 + 25010059-25010089,25010606-25010654,25010812-250108... 29 1.1
04_04_0633 - 26771487-26771591,26771708-26771782,26771906-267719... 28 3.5
08_01_1003 + 10174556-10174951 27 6.1
06_01_0182 + 1413551-1413794,1413883-1414139,1414241-1414387,141... 27 6.1
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 27 6.1
09_02_0146 + 4953007-4953297,4954105-4954341,4954592-4954669,495... 27 8.1
02_02_0319 - 8917042-8917122,8917628-8917680,8917754-8917800,891... 27 8.1
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 46.8 bits (106), Expect = 7e-06
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 5 EGERERDP----NEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEH 172
EGE+++ +E +KP AY L+ +D IK ++P+A F EVS + + W L +E
Sbjct: 143 EGEKKKGKGKAGHERKKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEE 202
Query: 173 KSVYKQK 193
K Y+++
Sbjct: 203 KQPYEER 209
Score = 40.3 bits (90), Expect = 6e-04
Identities = 15/59 (25%), Positives = 35/59 (59%)
Frame = +2
Query: 11 ERERDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 187
++E+DP++P++P+SAY ++ + +AA+ + N E+ +I W + K+ ++
Sbjct: 277 KKEKDPSKPKQPMSAYFVYTQQRRAALVAEKKNVP--EIGRITGEEWKAMSEAEKAPFE 333
Score = 39.9 bits (89), Expect = 8e-04
Identities = 18/81 (22%), Positives = 33/81 (40%)
Frame = +2
Query: 23 DPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEV 202
DPN P+KP S++ LF ++ + + + P + ++ +V+ W L K + K
Sbjct: 410 DPNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAE 469
Query: 203 XXXXXXXXXXXXXXSLVSKGG 265
+ S GG
Sbjct: 470 AMAAYKRDMEEYTKAAASGGG 490
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 46.0 bits (104), Expect = 1e-05
Identities = 16/64 (25%), Positives = 38/64 (59%)
Frame = +2
Query: 11 ERERDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQ 190
++++DPN P++ ++ + F + +A +K NP + E++K + W + +E K Y +
Sbjct: 550 KKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVE 609
Query: 191 KTEV 202
+++V
Sbjct: 610 QSQV 613
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 8 GERERDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVY 184
G R+RDP +P+ SAY FF++ +K +P+ E S+++ W+ L ++ K VY
Sbjct: 218 GRRQRDPAQPRPNRSAYNFFFKEKHPELKATHPHRE-REYSRMIGDAWNRLAADDKMVY 275
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 44.4 bits (100), Expect = 4e-05
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 11 ERERDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQ 190
++++DPN P++ ++ + F + +K NP+ E++K + MW + E K Y Q
Sbjct: 591 KKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGEEKQPYIQ 650
Query: 191 KTEV 202
+++V
Sbjct: 651 QSQV 654
>02_03_0176 +
16010806-16011095,16011983-16012061,16012389-16012464,
16012541-16012630,16012878-16013031,16013172-16013181,
16013240-16013407,16014087-16014485,16014580-16014990
Length = 558
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 23 DPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 193
DPN P+ S Y FF+D +K + P +SK++ W+ L E K+VY++K
Sbjct: 372 DPNHPKPNRSGYNFFFQDQHRKLKPEYPGQD-RLISKMIGERWNNLGPEDKAVYQEK 427
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 35.1 bits (77), Expect = 0.023
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 5 EGERERDPNEPQKPVSAYALFFRDTQAAIKGQNPNA-SFGEVSKIVASMWDGLDSEHKSV 181
+G+ D P+KP +A+ F D + K +NP+ S EV K W+ + E +
Sbjct: 39 KGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVK 98
Query: 182 Y 184
Y
Sbjct: 99 Y 99
>09_06_0203 +
21555747-21555805,21555862-21555939,21556034-21556091,
21556191-21556235,21556514-21556549,21556855-21556935,
21557016-21557087,21557184-21557195
Length = 146
Score = 33.1 bits (72), Expect = 0.093
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 17 ERDPNEPQKPVSAYALFFRDTQAAIKGQNPNA-SFGEVSKIVASMWDGL 160
E+DPN+P++P SA+ +F + K ++PN + K W +
Sbjct: 29 EKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSM 77
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 31.5 bits (68), Expect = 0.28
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 20 RDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMW 151
R P + Q+ SAY F +D IK NP+ S E A W
Sbjct: 187 RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNW 230
>02_05_0104 -
25858414-25858509,25858711-25858782,25859081-25859156,
25859286-25859334,25859826-25860012,25860164-25860340,
25860519-25860632
Length = 256
Score = 31.5 bits (68), Expect = 0.28
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 20 RDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMW 151
R P + Q+ SAY F +D IK NP+ S E A W
Sbjct: 159 RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNW 202
>12_02_1152 +
26515422-26515460,26516317-26516454,26518647-26518809,
26519165-26519213,26519315-26519390,26520348-26520473
Length = 196
Score = 30.7 bits (66), Expect = 0.50
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 20 RDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMW 151
R P + Q+ SAY F ++ IK NP+ S E A W
Sbjct: 113 RPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNW 156
>06_03_1487 +
30477615-30477658,30477778-30477891,30477941-30478028,
30478186-30478230,30478330-30478410,30478498-30478608,
30478907-30478927
Length = 167
Score = 29.9 bits (64), Expect = 0.87
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Frame = +2
Query: 5 EGERERDPNEPQKPVSAYALFF----------RDTQAAIKGQNP-NASFGEVSKIVASMW 151
+G+ +DPN+P++ SA+ +F + + K +NP N S V K W
Sbjct: 32 KGKAGKDPNKPKRAPSAFFVFMGFSFDLVSLREEFRKEFKEKNPKNKSVAAVGKAAGDRW 91
Query: 152 DGLDSEHKSVYKQK 193
L K+ Y K
Sbjct: 92 KSLTEADKAPYVAK 105
>03_05_0506 +
25010059-25010089,25010606-25010654,25010812-25010887,
25011450-25011560
Length = 88
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 26 PNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEH 172
P + Q+ SAY F ++ IK NP+ S E A W + H
Sbjct: 12 PEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIH 60
>04_04_0633 -
26771487-26771591,26771708-26771782,26771906-26771981,
26772096-26772144,26772848-26773037,26773119-26773292,
26773415-26773543
Length = 265
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 20 RDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMW 151
R + Q+ SAY F +D IK NP+ + E A W
Sbjct: 164 RTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNW 207
>08_01_1003 + 10174556-10174951
Length = 131
Score = 27.1 bits (57), Expect = 6.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 334 RPVLWQWSFPTSLRTKSIATG 396
RP+ W W L T+++ATG
Sbjct: 80 RPMAWSWGMEGCLHTEAMATG 100
>06_01_0182 +
1413551-1413794,1413883-1414139,1414241-1414387,
1414487-1414804
Length = 321
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 101 NPNASFGEVSKIVASMWDGLDSEHKSVYKQK 193
N ASFGE+ K+VA+ + K +YK K
Sbjct: 76 NSQASFGELKKMVAARTGLHPDDQKVMYKDK 106
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 413 SKVMHIPVAIDLVRKLVGNDHCHRTGL-GNSCHRLS 309
+ + + ++L++K +D+CHR G GNS +R S
Sbjct: 474 NSLARLEARLNLMQKKYWSDNCHRIGYGGNSANRKS 509
>09_02_0146 +
4953007-4953297,4954105-4954341,4954592-4954669,
4954991-4955167,4955705-4955761,4955988-4956174,
4956910-4957055,4957213-4957395,4957860-4957970,
4959386-4959505,4959596-4959740,4960001-4960164,
4960816-4960902,4961062-4961390,4963426-4963507,
4963616-4963746,4963976-4964225,4965112-4965393,
4966780-4966986
Length = 1087
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 57 MHYFFETRKPQLKDKTQMQALERFLRLSLP 146
+H F + R +D TQ + FL LSLP
Sbjct: 764 LHVFIKRRWQSWEDGTQSMIVRHFLTLSLP 793
>02_02_0319 -
8917042-8917122,8917628-8917680,8917754-8917800,
8917901-8917992,8919725-8920060,8920370-8920423,
8920547-8920879,8921133-8921207,8921293-8921441,
8922411-8922429
Length = 412
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -3
Query: 255 DTKLAL*AANAFKYSFFATSVFCLYTLLCSESRPSHMEATILETSPKLAFGFCP 94
+ + AL Y+ + + LY + + S SH+E +S FGFCP
Sbjct: 290 EERKALLNCQCLLYNIISQAGEALYDYVQTHSEVSHVEVLAHVSSILKEFGFCP 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,414,565
Number of Sequences: 37544
Number of extensions: 211517
Number of successful extensions: 564
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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