Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A12
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 38 0.004
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 38 0.004
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 37 0.011
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 37 0.011
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 37 0.011
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 37 0.011
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical ... 32 0.24
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.73
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 31 0.73
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.73
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.73
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 31 0.73
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.73
Z99281-30|CAH60779.1| 164|Caenorhabditis elegans Hypothetical p... 30 1.3
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 3.9
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 3.9
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 3.9
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 3.9
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 3.9
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 3.9
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 27 6.8
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 27 6.8
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 27 6.8
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 27 6.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 6.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 6.8
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 27 6.8
U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei) ig-d... 27 9.0
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P A PP +I+WLK G PLQ D V SA G L
Sbjct: 2408 PVYARPPAKITWLKAGKPLQSDKFVKTSANGQKL 2441
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGN-LLISRATLQVSILFVCLFRYRY 387
P P ISWLK G P D N+++S G+ L+I +A L+ C+ Y
Sbjct: 3327 PKPTISWLKGGRPFNMD-NIILSPRGDTLMILKAQRFDGGLYTCVATNSY 3375
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLIS--AEGNLLISRATLQVSILFVCLFRYRY 387
PPP I W K L +N + A+GNLLI+ A ++ F C+ R Y
Sbjct: 820 PPPEIEWQKGNVLLATLNNPRYTQLADGNLLITDAQIEDQGQFTCIARNTY 870
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 539 AAPPPRISWLKHGSPLQQD-HNVLISAEGNLLISRATLQVSILFVC 405
A+PP ++W + G + D ++ ++G L+I A+++ + ++ C
Sbjct: 1388 ASPPASVTWFRRGIAIGTDTKGYVVESDGTLVIQSASVEDATIYTC 1433
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I WLK+G + D N+ I +G +L
Sbjct: 3795 PFPSIKWLKNGKEVTDDENIRIVEQGQVL 3823
Score = 30.3 bits (65), Expect = 0.96
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 542 AAAPPPRISWLKHGSPL-QQDHNVLISAEGNLLISRATLQVSILFVC 405
+ PPP I+W G P+ + ++A+ L++ +A S ++ C
Sbjct: 1025 SGTPPPIITWYLDGRPITPNSRDFTVTADNTLIVRKADKSYSGVYTC 1071
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQ-QDHNVLISAEGNLLISR 438
P +P P I+WLK G+ ++ D V A L IS+
Sbjct: 2501 PAKGSPSPTITWLKDGNAIEPNDRYVFFDAGRQLQISK 2538
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I W+K P+++ + I G+LL
Sbjct: 915 PKPSIVWIKDDKPVEEGPTIKIEGGGSLL 943
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P A PP +I+WLK G PLQ D V SA G L
Sbjct: 2408 PVYARPPAKITWLKAGKPLQSDKFVKTSANGQKL 2441
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGN-LLISRATLQVSILFVCLFRYRY 387
P P ISWLK G P D N+++S G+ L+I +A L+ C+ Y
Sbjct: 3327 PKPTISWLKGGRPFNMD-NIILSPRGDTLMILKAQRFDGGLYTCVATNSY 3375
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLIS--AEGNLLISRATLQVSILFVCLFRYRY 387
PPP I W K L +N + A+GNLLI+ A ++ F C+ R Y
Sbjct: 820 PPPEIEWQKGNVLLATLNNPRYTQLADGNLLITDAQIEDQGQFTCIARNTY 870
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 539 AAPPPRISWLKHGSPLQQD-HNVLISAEGNLLISRATLQVSILFVC 405
A+PP ++W + G + D ++ ++G L+I A+++ + ++ C
Sbjct: 1388 ASPPASVTWFRRGIAIGTDTKGYVVESDGTLVIQSASVEDATIYTC 1433
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I WLK+G + D N+ I +G +L
Sbjct: 3795 PFPSIKWLKNGKEVTDDENIRIVEQGQVL 3823
Score = 30.3 bits (65), Expect = 0.96
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 542 AAAPPPRISWLKHGSPL-QQDHNVLISAEGNLLISRATLQVSILFVC 405
+ PPP I+W G P+ + ++A+ L++ +A S ++ C
Sbjct: 1025 SGTPPPIITWYLDGRPITPNSRDFTVTADNTLIVRKADKSYSGVYTC 1071
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQ-QDHNVLISAEGNLLISR 438
P +P P I+WLK G+ ++ D V A L IS+
Sbjct: 2501 PAKGSPSPTITWLKDGNAIEPNDRYVFFDAGRQLQISK 2538
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I W+K P+++ + I G+LL
Sbjct: 915 PKPSIVWIKDDKPVEEGPTIKIEGGGSLL 943
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P A PP +I+WLK G PLQ D V SA G L
Sbjct: 2408 PVYARPPAKITWLKAGKPLQSDKFVKTSANGQKL 2441
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGN-LLISRATLQVSILFVCLFRYRY 387
P P ISWLK G P D N+++S G+ L+I +A L+ C+ Y
Sbjct: 3327 PKPTISWLKGGRPFNMD-NIILSPRGDTLMILKAQRFDGGLYTCVATNSY 3375
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLIS--AEGNLLISRATLQVSILFVCLFRYRY 387
PPP I W K L +N + A+GNLLI+ A ++ F C+ R Y
Sbjct: 820 PPPEIEWQKGNVLLATLNNPRYTQLADGNLLITDAQIEDQGQFTCIARNTY 870
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 539 AAPPPRISWLKHGSPLQQD-HNVLISAEGNLLISRATLQVSILFVC 405
A+PP ++W + G + D ++ ++G L+I A+++ + ++ C
Sbjct: 1388 ASPPASVTWFRRGIAIGTDTKGYVVESDGTLVIQSASVEDATIYTC 1433
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I WLK+G + D N+ I +G +L
Sbjct: 3795 PFPSIKWLKNGKEVTDDENIRIVEQGQVL 3823
Score = 30.3 bits (65), Expect = 0.96
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 542 AAAPPPRISWLKHGSPL-QQDHNVLISAEGNLLISRATLQVSILFVC 405
+ PPP I+W G P+ + ++A+ L++ +A S ++ C
Sbjct: 1025 SGTPPPIITWYLDGRPITPNSRDFTVTADNTLIVRKADKSYSGVYTC 1071
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQ-QDHNVLISAEGNLLISR 438
P +P P I+WLK G+ ++ D V A L IS+
Sbjct: 2501 PAKGSPSPTITWLKDGNAIEPNDRYVFFDAGRQLQISK 2538
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I W+K P+++ + I G+LL
Sbjct: 915 PKPSIVWIKDDKPVEEGPTIKIEGGGSLL 943
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P A PP +I+WLK G PLQ D V SA G L
Sbjct: 2408 PVYARPPAKITWLKAGKPLQSDKFVKTSANGQKL 2441
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGN-LLISRATLQVSILFVCLFRYRY 387
P P ISWLK G P D N+++S G+ L+I +A L+ C+ Y
Sbjct: 3327 PKPTISWLKGGRPFNMD-NIILSPRGDTLMILKAQRFDGGLYTCVATNSY 3375
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLIS--AEGNLLISRATLQVSILFVCLFRYRY 387
PPP I W K L +N + A+GNLLI+ A ++ F C+ R Y
Sbjct: 820 PPPEIEWQKGNVLLATLNNPRYTQLADGNLLITDAQIEDQGQFTCIARNTY 870
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 539 AAPPPRISWLKHGSPLQQD-HNVLISAEGNLLISRATLQVSILFVC 405
A+PP ++W + G + D ++ ++G L+I A+++ + ++ C
Sbjct: 1388 ASPPASVTWFRRGIAIGTDTKGYVVESDGTLVIQSASVEDATIYTC 1433
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I WLK+G + D N+ I +G +L
Sbjct: 3795 PFPSIKWLKNGKEVTDDENIRIVEQGQVL 3823
Score = 30.3 bits (65), Expect = 0.96
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 542 AAAPPPRISWLKHGSPL-QQDHNVLISAEGNLLISRATLQVSILFVC 405
+ PPP I+W G P+ + ++A+ L++ +A S ++ C
Sbjct: 1025 SGTPPPIITWYLDGRPITPNSRDFTVTADNTLIVRKADKSYSGVYTC 1071
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQ-QDHNVLISAEGNLLISR 438
P +P P I+WLK G+ ++ D V A L IS+
Sbjct: 2501 PAKGSPSPTITWLKDGNAIEPNDRYVFFDAGRQLQISK 2538
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I W+K P+++ + I G+LL
Sbjct: 915 PKPSIVWIKDDKPVEEGPTIKIEGGGSLL 943
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P A PP +I+WLK G PLQ D V SA G L
Sbjct: 2408 PVYARPPAKITWLKAGKPLQSDKFVKTSANGQKL 2441
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGN-LLISRATLQVSILFVCLFRYRY 387
P P ISWLK G P D N+++S G+ L+I +A L+ C+ Y
Sbjct: 3327 PKPTISWLKGGRPFNMD-NIILSPRGDTLMILKAQRFDGGLYTCVATNSY 3375
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLIS--AEGNLLISRATLQVSILFVCLFRYRY 387
PPP I W K L +N + A+GNLLI+ A ++ F C+ R Y
Sbjct: 820 PPPEIEWQKGNVLLATLNNPRYTQLADGNLLITDAQIEDQGQFTCIARNTY 870
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 539 AAPPPRISWLKHGSPLQQD-HNVLISAEGNLLISRATLQVSILFVC 405
A+PP ++W + G + D ++ ++G L+I A+++ + ++ C
Sbjct: 1388 ASPPASVTWFRRGIAIGTDTKGYVVESDGTLVIQSASVEDATIYTC 1433
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I WLK+G + D N+ I +G +L
Sbjct: 3795 PFPSIKWLKNGKEVTDDENIRIVEQGQVL 3823
Score = 30.3 bits (65), Expect = 0.96
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 542 AAAPPPRISWLKHGSPL-QQDHNVLISAEGNLLISRATLQVSILFVC 405
+ PPP I+W G P+ + ++A+ L++ +A S ++ C
Sbjct: 1025 SGTPPPIITWYLDGRPITPNSRDFTVTADNTLIVRKADKSYSGVYTC 1071
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQ-QDHNVLISAEGNLLISR 438
P +P P I+WLK G+ ++ D V A L IS+
Sbjct: 2501 PAKGSPSPTITWLKDGNAIEPNDRYVFFDAGRQLQISK 2538
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLL 447
P P I W+K P+++ + I G+LL
Sbjct: 915 PKPSIVWIKDDKPVEEGPTIKIEGGGSLL 943
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -3
Query: 545 PAAAPPPRISWLKHGSPLQQDHNVLISAEGNLLISRATLQVSILFVC 405
P + P ++W K G +Q D NV+ +++G+L++S A L S + C
Sbjct: 135 PESDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTC 181
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -3
Query: 545 PAAAPPPRISWLKHGSPLQQDHNVLISAEGNLLISRATLQVSILFVC 405
P + P ++W K G +Q D NV+ +++G+L++S A L S + C
Sbjct: 163 PESDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTC 209
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -3
Query: 545 PAAAPPPRISWLKHGSPLQQDHNVLISAEGNLLISRATLQVSILFVC 405
P + P ++W K G +Q D NV+ +++G+L++S A L S + C
Sbjct: 135 PESDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTC 181
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -3
Query: 545 PAAAPPPRISWLKHGSPLQQDHNVLISAEGNLLISRATLQVSILFVC 405
P + P ++W K G +Q D NV+ +++G+L++S A L S + C
Sbjct: 135 PESDPKAELTWYKDGVVVQPDANVIRASDGSLIMSAARLSDSGNYTC 181
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 524 RISWLKHGSPLQQDHNVLISAEGNLLISRATLQVSILFVC 405
+I W K+G ++ D ++ +SA GNL + A ++ + ++ C
Sbjct: 349 KIYWKKNGKKIKNDAHIKVSANGNLRVFHARMEDAGVYEC 388
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 524 RISWLKHGSPLQQDHNVLISAEGNLLISRATLQVSILFVC 405
+I W K+G ++ D ++ +SA GNL + A ++ + ++ C
Sbjct: 683 KIYWKKNGKKIKNDAHIKVSANGNLRVFHARMEDAGVYEC 722
>AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical
protein F54E2.4 protein.
Length = 406
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 539 AAPPPRISWLKHGSPLQ 489
A PPP I W+K+G PLQ
Sbjct: 161 AVPPPNIEWMKNGKPLQ 177
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQD-HNVLISAEG----NLLISRATLQVSILFVC 405
P P + WLK G P+Q D +V+ EG ++ I A L+ S + C
Sbjct: 3313 PDPSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARLEDSGKYAC 3360
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQD-HNVLISAEG----NLLISRATLQVSILFVC 405
P P + WLK G P+Q D +V+ EG ++ I A L+ S + C
Sbjct: 2673 PDPSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARLEDSGKYAC 2720
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQD-HNVLISAEG----NLLISRATLQVSILFVC 405
P P + WLK G P+Q D +V+ EG ++ I A L+ S + C
Sbjct: 3313 PDPSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARLEDSGKYAC 3360
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQD-HNVLISAEG----NLLISRATLQVSILFVC 405
P P + WLK G P+Q D +V+ EG ++ I A L+ S + C
Sbjct: 3313 PDPSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARLEDSGKYAC 3360
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQD-HNVLISAEG----NLLISRATLQVSILFVC 405
P P + WLK G P+Q D +V+ EG ++ I A L+ S + C
Sbjct: 2673 PDPSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARLEDSGKYAC 2720
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQD-HNVLISAEG----NLLISRATLQVSILFVC 405
P P + WLK G P+Q D +V+ EG ++ I A L+ S + C
Sbjct: 3313 PDPSVEWLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARLEDSGKYAC 3360
>Z99281-30|CAH60779.1| 164|Caenorhabditis elegans Hypothetical
protein Y57G11C.50 protein.
Length = 164
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 542 AAAPPPRISWLKHGSPLQQDHNVLISAEGNLLISRATLQVSILFVCLF 399
+A P P W +GS + +D + GN L+ AT + + C F
Sbjct: 97 SAYPVPIPRWFHNGSEINEDKGYRFESNGNTLVFNATQDKAGKYDCRF 144
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEG 456
P P I W K G PL D + EG
Sbjct: 3959 PKPTIQWFKDGQPLPNDDRFQVVEEG 3984
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLI 444
P P + W G P+ +NV IS +G I
Sbjct: 4186 PEPTVQWQFKGKPISASNNVKISRDGKRAI 4215
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEG 456
P P I W K G PL D + EG
Sbjct: 3912 PKPTIQWFKDGQPLPNDDRFQVVEEG 3937
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLI 444
P P + W G P+ +NV IS +G I
Sbjct: 4139 PEPTVQWQFKGKPISASNNVKISRDGKRAI 4168
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEG 456
P P I W K G PL D + EG
Sbjct: 4197 PKPTIQWFKDGQPLPNDDRFQVVEEG 4222
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLI 444
P P + W G P+ +NV IS +G I
Sbjct: 4424 PEPTVQWQFKGKPISASNNVKISRDGKRAI 4453
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEG 456
P P I W K G PL D + EG
Sbjct: 4197 PKPTIQWFKDGQPLPNDDRFQVVEEG 4222
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEG 456
P P I W K G PL D + EG
Sbjct: 4156 PKPTIQWFKDGQPLPNDDRFQVVEEG 4181
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLI 444
P P + W G P+ +NV IS +G I
Sbjct: 4383 PEPTVQWQFKGKPISASNNVKISRDGKRAI 4412
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEG 456
P P I W K G PL D + EG
Sbjct: 3928 PKPTIQWFKDGQPLPNDDRFQVVEEG 3953
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLI 444
P P + W G P+ +NV IS +G I
Sbjct: 4155 PEPTVQWQFKGKPISASNNVKISRDGKRAI 4184
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 551 TPPAAAPPPRISWLKHGSPLQ-QD-HNVLISAEGNLLISRATLQVSILFVCL 402
+PP P P +SW K L+ QD + ++GNL+I S + C+
Sbjct: 155 SPPRGFPEPVVSWRKDDKELRIQDMPRYTLHSDGNLIIDPVDRSDSGTYQCV 206
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 551 TPPAAAPPPRISWLKHGSPLQ-QD-HNVLISAEGNLLISRATLQVSILFVCL 402
+PP P P +SW K L+ QD + ++GNL+I S + C+
Sbjct: 155 SPPRGFPEPVVSWRKDDKELRIQDMPRYTLHSDGNLIIDPVDRSDSGTYQCV 206
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLISR 438
P P ISW K G L + ++ EG+ I R
Sbjct: 2515 PDPVISWTKAGQKLNNEEKYMMRNEGDKFILR 2546
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLISR 438
P P ISW K G L + ++ EG+ I R
Sbjct: 2530 PDPVISWTKAGQKLNNEEKYMMRNEGDKFILR 2561
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLISR 438
P P ISW K G L + ++ EG+ I R
Sbjct: 18341 PDPVISWTKAGQKLNNEEKYMMRNEGDKFILR 18372
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 533 PPPRISWLKHGSPLQQDHNVLISAEGNLLISR 438
P P ISW K G L + ++ EG+ I R
Sbjct: 18356 PDPVISWTKAGQKLNNEEKYMMRNEGDKFILR 18387
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 551 TPPAAAPPPRISWLKHGSPLQ-QD-HNVLISAEGNLLISRATLQVSILFVCL 402
+PP P P +SW K L+ QD + ++GNL+I S + C+
Sbjct: 155 SPPRGFPEPVVSWRKDDKELRIQDMPRYTLHSDGNLIIDPVDRSDSGTYQCV 206
>U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical
protein T25D10.2 protein.
Length = 231
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 545 PAAAPPPRISWLKHGSPLQQ-DHNVLISAEGNLLISRATLQVSILFVC 405
P A PPP+++W + P+ + + G L+IS + F C
Sbjct: 155 PKAYPPPKVTWTVNSLPISHISSDYVAFPNGTLIISHFSYHHFGYFEC 202
>AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei)
ig-domain protein protein7 protein.
Length = 239
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 548 PPAAAPPPRISWLKHGSPLQQDHNVLISAEGNLLI 444
P A P P + W K+G PL + I +GN LI
Sbjct: 165 PVLANPEPMVRWEKNGEPLGNSDS--IEYDGNNLI 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,424,467
Number of Sequences: 27780
Number of extensions: 144048
Number of successful extensions: 837
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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