Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A11
         (414 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7FFE Cluster: PREDICTED: similar to pawn CG111...    36   0.25 
UniRef50_Q4P9G3 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  
UniRef50_A2Q626 Cluster: Helix-loop-helix DNA-binding; n=1; Medi...    32   5.3  
UniRef50_Q678B5 Cluster: Putative uncharacterized protein; n=1; ...    31   9.3  
UniRef50_Q10168 Cluster: Nucleoporin nsp1; n=1; Schizosaccharomy...    31   9.3  

>UniRef50_UPI0000DB7FFE Cluster: PREDICTED: similar to pawn
            CG11101-PA, partial; n=1; Apis mellifera|Rep: PREDICTED:
            similar to pawn CG11101-PA, partial - Apis mellifera
          Length = 6029

 Score = 36.3 bits (80), Expect = 0.25
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 5    EAQQDETATESLDELNDAPTRTTNNPLLKFRRPAIARQPG-TAITPRSTT 151
            +A+  ET T  L    ++  ++T NPLL+FRRP      G T  TP+S T
Sbjct: 1656 DAEDGETVTTPLQTTTESSKKST-NPLLRFRRPIGLNNSGRTGTTPKSPT 1704


>UniRef50_Q4P9G3 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1535

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +2

Query: 5   EAQQDETATESLDELNDAPTRTTNNPLLKFRRPAIARQPGTAITPRSTTQ 154
           + QQ + A +  +E++D+P +TT   + +   PA+A Q    +T R+  +
Sbjct: 519 QPQQPQNAQQQNNEVSDSPDQTTLQAITQEAPPAVAEQEQNTVTYRTVVK 568


>UniRef50_A2Q626 Cluster: Helix-loop-helix DNA-binding; n=1;
           Medicago truncatula|Rep: Helix-loop-helix DNA-binding -
           Medicago truncatula (Barrel medic)
          Length = 366

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 88  EI*TPSYSSTTRNSNNPKIDYSIR*KRWSNT*RSNYNYYEK 210
           +I TP+ SS+  N+NN K+D  IR KR +N  RS ++  E+
Sbjct: 21  DIFTPNTSSSINNNNNVKVDEPIRGKR-ANPHRSKHSETEQ 60


>UniRef50_Q678B5 Cluster: Putative uncharacterized protein; n=1;
           Lymphocystis disease virus - isolate China|Rep: Putative
           uncharacterized protein - Lymphocystis disease virus -
           isolate China
          Length = 270

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +2

Query: 11  QQDETATESLDELNDAPTRTTNNPLLKFRRPAIARQPGTAITPRSTTQ 154
           Q+  T T+        P  TT  P    ++PA  +QP T   P +T Q
Sbjct: 124 QKPATTTQKPATTTQKPATTTQKPATTTQKPATTKQPVTTQEPSTTPQ 171


>UniRef50_Q10168 Cluster: Nucleoporin nsp1; n=1; Schizosaccharomyces
           pombe|Rep: Nucleoporin nsp1 - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 598

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 35  SLDELNDAPTRTTNNPLLKFRRPAIARQPG--TAITPRST 148
           SL   N+A T TT N    F +PA    PG  T +TP S+
Sbjct: 209 SLGSTNNASTSTTANSGFSFGKPATTSAPGSNTTVTPSSS 248


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,807,759
Number of Sequences: 1657284
Number of extensions: 3066413
Number of successful extensions: 8216
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8207
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)