Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A10
(243 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=... 61 4e-09
UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ... 60 9e-09
UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2; ... 51 4e-06
UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185... 47 7e-05
UniRef50_A5BUD3 Cluster: Putative uncharacterized protein; n=1; ... 46 2e-04
UniRef50_A0FH78 Cluster: Antifreeze protein; n=1; Saussurea invo... 44 7e-04
UniRef50_A6NFT1 Cluster: Uncharacterized protein ENSP00000366514... 42 0.002
UniRef50_Q57L44 Cluster: ORF16-lacZ fusion protein; n=2; Bacteri... 39 0.025
UniRef50_Q7NN42 Cluster: Sensor protein; n=1; Gloeobacter violac... 36 0.13
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 36 0.17
UniRef50_A3CE51 Cluster: Putative uncharacterized protein; n=1; ... 34 0.53
UniRef50_A3M2D4 Cluster: Putative uncharacterized protein; n=1; ... 34 0.70
UniRef50_UPI000069F8A4 Cluster: Collagen alpha-1(XII) chain prec... 33 0.92
UniRef50_Q2M1P5 Cluster: Kinesin-like protein KIF7; n=16; Eutele... 33 1.2
UniRef50_UPI0000F1F92A Cluster: PREDICTED: similar to autoantige... 33 1.6
UniRef50_UPI000069F8A6 Cluster: Collagen alpha-1(XII) chain prec... 33 1.6
UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;... 32 2.8
UniRef50_Q4P782 Cluster: GPI inositol-deacylase; n=1; Ustilago m... 32 2.8
UniRef50_UPI000155C66E Cluster: PREDICTED: similar to solute car... 31 3.7
UniRef50_A5P4F2 Cluster: Glycosyl transferase, family 2; n=2; Al... 31 3.7
UniRef50_UPI0000DD7F7F Cluster: PREDICTED: hypothetical protein;... 31 4.9
UniRef50_UPI0000DB7127 Cluster: PREDICTED: similar to Collagen a... 31 4.9
UniRef50_Q0DTC4 Cluster: Os03g0256800 protein; n=29; Oryza sativ... 31 4.9
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 31 4.9
UniRef50_UPI000065EA53 Cluster: Homolog of Gallus gallus "Collag... 31 6.5
UniRef50_UPI000065DAE4 Cluster: Homolog of Homo sapiens "PREDICT... 31 6.5
UniRef50_A7KE05 Cluster: Collagen Type XI Alpha2; n=2; Salmo sal... 31 6.5
UniRef50_UPI0000D9B39B Cluster: PREDICTED: hypothetical protein;... 30 8.6
UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whol... 30 8.6
UniRef50_A5WW97 Cluster: Novel protein with Collagen triple heli... 30 8.6
UniRef50_Q1MX63 Cluster: Type I polyketide synthase-related prot... 30 8.6
>UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to Ac1147
- Monodelphis domestica
Length = 510
Score = 61.3 bits (142), Expect = 4e-09
Identities = 34/59 (57%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 16 MPLDVLGRTRATLKESACS-PWPRGPGNPLKLLRAGDWGLQLSPIGRGIPSKRES*ARV 189
MPLDV G TRATL SAC+ P P G GNPL +R GD GLQL P+ P K S A V
Sbjct: 1 MPLDVRGCTRATLTGSACAYPTPAGAGNPLNPIRDGDRGLQLFPMNEEFPVKDSSGASV 59
>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 347
Score = 60.1 bits (139), Expect = 9e-09
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1
Query: 151 RGIPSKRES*ARVDYLPALCTHRPSLLPIE 240
RGIPSKR S ARVDY+PALCTHRPSLLPIE
Sbjct: 42 RGIPSKRXSLARVDYVPALCTHRPSLLPIE 71
>UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 172
Score = 51.2 bits (117), Expect = 4e-06
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +1
Query: 151 RGIPSKRES*ARVDYLPALCTHRPSLLPIE 240
RG S+ ES AR DY+PALCTHRPSLLPIE
Sbjct: 4 RGNNSRHESSARADYVPALCTHRPSLLPIE 33
>UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST1185 - Sulfolobus tokodaii
Length = 109
Score = 47.2 bits (107), Expect = 7e-05
Identities = 31/69 (44%), Positives = 33/69 (47%)
Frame = -2
Query: 239 SIGSSDGRCVQRAGR*STRAYDSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHAD 60
S+G SDGRCVQ AG S R D RLLGIPR G P G+ P A
Sbjct: 36 SLGWSDGRCVQGAGTYSPRVVDPRLLGIPRSRG-RVSALDPNCGRVWGIGSPFRGRNPAV 94
Query: 59 SFSVARVRP 33
V RVRP
Sbjct: 95 PAIVTRVRP 103
>UniRef50_A5BUD3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 143
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 181 ARVDYLPALCTHRPSLLPIE 240
ARVDY+PALCTHRPSLLPIE
Sbjct: 14 ARVDYVPALCTHRPSLLPIE 33
>UniRef50_A0FH78 Cluster: Antifreeze protein; n=1; Saussurea
involucrata|Rep: Antifreeze protein - Saussurea
involucrata
Length = 200
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +2
Query: 128 VCNYPP*DEEFLVSASHKLALITSLPFVHTARR 226
+C Y EFLVSASH+LAL TSLPFVHT R
Sbjct: 115 LCFYMTPFAEFLVSASHQLALTTSLPFVHTRGR 147
>UniRef50_A6NFT1 Cluster: Uncharacterized protein ENSP00000366514;
n=39; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000366514 - Homo sapiens (Human)
Length = 95
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 10 SVMPLDVLGRTRATLKESAC-SPWPRGPGNPLKLLRAGDWGLQLSP 144
SV +D+ G T T S C SP P G G L +R GDWGLQL P
Sbjct: 50 SVTLIDIWGCTCTTPTGSVCASPTPAGAGKLLNPIRDGDWGLQLFP 95
>UniRef50_Q57L44 Cluster: ORF16-lacZ fusion protein; n=2;
Bacteria|Rep: ORF16-lacZ fusion protein - Salmonella
choleraesuis
Length = 106
Score = 38.7 bits (86), Expect = 0.025
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +1
Query: 34 GRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIGRGIPSKRES*ARVDYLPALCT 213
G TRAT+ + S R G P K+ R+ DW LQL + + A V+ P CT
Sbjct: 20 GYTRATMAHTKRSDLARASG-PHKVRRSPDWSLQLDSMKSESLVIVDQNATVNTFPGPCT 78
Query: 214 HRP 222
HRP
Sbjct: 79 HRP 81
>UniRef50_Q7NN42 Cluster: Sensor protein; n=1; Gloeobacter
violaceus|Rep: Sensor protein - Gloeobacter violaceus
Length = 370
Score = 36.3 bits (80), Expect = 0.13
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 1 ARGSVMPLDVL--GRTRATLKESACSPWPRGPGNPLKLLRAGD-WGLQLSPIGRGIP 162
+ G+ +P+D L GR A L +A + PRG ++LLRA D W L + G GIP
Sbjct: 240 SEGAHLPVDALQLGRVVANLVGNAINHTPRGGRVTVRLLRAPDEWRLLVEDTGTGIP 296
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 35.9 bits (79), Expect = 0.17
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2
Query: 65 ADSFSVARVRPRTSKGITD 9
A S SVARVRPRTSKGITD
Sbjct: 28 AGSVSVARVRPRTSKGITD 46
>UniRef50_A3CE51 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 543
Score = 34.3 bits (75), Expect = 0.53
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 37 RTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIGRGIPSKRES 177
RTRA+ P +GP NP L GD + SP+G G P +RES
Sbjct: 252 RTRASGSARLPPPCHQGPRNPRPLQLTGD-RARASPLGFGSPQRRES 297
>UniRef50_A3M2D4 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii (strain
ATCC 17978 / NCDC KC 755)
Length = 1459
Score = 33.9 bits (74), Expect = 0.70
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 4 RGSVMPLDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLS--PIGRGIPSKRES 177
+GSV ++V T K AC+ + G + + + RAG GL L P+ G PS+ +
Sbjct: 1182 QGSVFKVEVRQENNPTAKTKACNEFQSGILDAMIITRAGSTGLSLHAIPVNDGSPSQSDH 1241
Query: 178 *ARVDYL 198
+ ++L
Sbjct: 1242 LRQREFL 1248
>UniRef50_UPI000069F8A4 Cluster: Collagen alpha-1(XII) chain
precursor.; n=1; Xenopus tropicalis|Rep: Collagen
alpha-1(XII) chain precursor. - Xenopus tropicalis
Length = 1779
Score = 33.5 bits (73), Expect = 0.92
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -2
Query: 164 LGIPRPMGDNCKPQSPARRSFNGLPGPLGQ----GEHADSFSVARVR 36
+G P P G P ++ NGLPGPLGQ GE D S +R
Sbjct: 1581 MGAPGPQGVPGPSGKPGKQGDNGLPGPLGQKGDKGERGDMASQNMMR 1627
>UniRef50_Q2M1P5 Cluster: Kinesin-like protein KIF7; n=16;
Euteleostomi|Rep: Kinesin-like protein KIF7 - Homo
sapiens (Human)
Length = 830
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 22 LDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIGRGIPSKRES*ARVDYLP 201
++ +G +R K S CS + PGN +L A + L LSP+ G P RE + + P
Sbjct: 701 VNAVGHSRGGEKRSLCSEGRQAPGNEDELHLAPEL-LWLSPLTEGAPRTREETRDLVHAP 759
Query: 202 ALCTHRPSLL 231
T + S L
Sbjct: 760 LPLTWKRSSL 769
>UniRef50_UPI0000F1F92A Cluster: PREDICTED: similar to autoantigen;
n=1; Danio rerio|Rep: PREDICTED: similar to autoantigen
- Danio rerio
Length = 1487
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G+P P GD+ P + F G+PGP G H+
Sbjct: 615 GLPGPKGDSGSPGTRGDNGFPGIPGPPGMPGHS 647
>UniRef50_UPI000069F8A6 Cluster: Collagen alpha-1(XII) chain
precursor.; n=2; Xenopus tropicalis|Rep: Collagen
alpha-1(XII) chain precursor. - Xenopus tropicalis
Length = 1304
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ----GEHADSFSVARVR 36
G P P G P ++ NGLPGPLGQ GE D S +R
Sbjct: 1175 GAPGPQGVPGPSGKPGKQGDNGLPGPLGQKGDKGERGDMASQNMMR 1220
>UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 892
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 139 IIANPNPQHEGVSTGCPGL*ARENMLIPSV*RACGPG 29
+ + P P H G S PG R S RACGPG
Sbjct: 663 LASTPGPDHRGRSASMPGPAGRRRRSSASRRRACGPG 699
>UniRef50_Q4P782 Cluster: GPI inositol-deacylase; n=1; Ustilago
maydis|Rep: GPI inositol-deacylase - Ustilago maydis
(Smut fungus)
Length = 1520
Score = 31.9 bits (69), Expect = 2.8
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -2
Query: 203 AGR*STRAYDSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADSFSVARVRP 33
A R S+ +YDSRLL R N +S ++ S GLP + H SVARV+P
Sbjct: 1275 ASRLSSNSYDSRLLAEVRATISN---ESSSQSSCGGLPAQASEISH---ISVARVQP 1325
>UniRef50_UPI000155C66E Cluster: PREDICTED: similar to solute
carrier family 39 (zinc transporter), member 3; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
solute carrier family 39 (zinc transporter), member 3 -
Ornithorhynchus anatinus
Length = 459
Score = 31.5 bits (68), Expect = 3.7
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = -2
Query: 218 RCVQRAGR*STRAYDSRLLGIPRPM-------GDNCKPQSPARRSFNGLPGPLGQGEHAD 60
RC RAGR + RA +R +G P + G+ P +PAR + G P G+G A+
Sbjct: 147 RCSSRAGRTARRAPAARGVGGPEELTDRRADQGEAALPAAPARSANRG-PRGAGRGGGAE 205
Query: 59 SFSVARVRPRTSKG 18
+ R R R G
Sbjct: 206 EEAKRRRRGRARSG 219
>UniRef50_A5P4F2 Cluster: Glycosyl transferase, family 2; n=2;
Alphaproteobacteria|Rep: Glycosyl transferase, family 2
- Methylobacterium sp. 4-46
Length = 765
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 173 SRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADSFSVARVRP 33
SR +P P C P++P R F PGP G+ A + + R RP
Sbjct: 109 SRRPRVPAP----CSPRTPRRPRFRAPPGPAGRARRALALAHLRGRP 151
>UniRef50_UPI0000DD7F7F Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 243
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -2
Query: 170 RLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQG---EHADSFSVARVRPRTSKG 18
RLLG+ RP G P + + G G LG G A + R RP S+G
Sbjct: 75 RLLGVGRPSGAGRAGGGPVKAAQRGAGGVLGAGLRCPEAAALGARRPRPSASRG 128
>UniRef50_UPI0000DB7127 Cluster: PREDICTED: similar to Collagen
alpha-1(IX) chain precursor; n=1; Apis mellifera|Rep:
PREDICTED: similar to Collagen alpha-1(IX) chain
precursor - Apis mellifera
Length = 884
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -2
Query: 152 RPMGDNCKPQSPARRSFNGLPGPLG 78
RP GD P P R FNGLPGP G
Sbjct: 765 RP-GDPGLPGLPGERGFNGLPGPQG 788
>UniRef50_Q0DTC4 Cluster: Os03g0256800 protein; n=29; Oryza
sativa|Rep: Os03g0256800 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1144
Score = 31.1 bits (67), Expect = 4.9
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -2
Query: 230 SSDGRCVQRAGR*STRAYD-SRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADS 57
++DGR A R RA +R G RP D + + PARRS G G+GE S
Sbjct: 904 AADGRAHLAAARARPRAASPARPTGAARPRPDGHRRRPPARRSGARERGGKGEGERRSS 962
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 239 SIGSSDGRCVQRAG 198
SIG SDGRCVQRAG
Sbjct: 72 SIGRSDGRCVQRAG 85
>UniRef50_UPI000065EA53 Cluster: Homolog of Gallus gallus "Collagen
alpha 2(VI) chain precursor.; n=1; Takifugu
rubripes|Rep: Homolog of Gallus gallus "Collagen alpha
2(VI) chain precursor. - Takifugu rubripes
Length = 348
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGP 84
G P+P G C P P R S GLPGP
Sbjct: 192 GRPKP-GSPCNPGDPGRPSTPGLPGP 216
>UniRef50_UPI000065DAE4 Cluster: Homolog of Homo sapiens "PREDICTED
"similar to matrilin 2 precursor; n=4; Euteleostomi|Rep:
Homolog of Homo sapiens "PREDICTED "similar to matrilin
2 precursor - Takifugu rubripes
Length = 842
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSP-ARRSFNGLPGPLG-QGE 69
L G+P P GD P+ P R+ GLPGP G QGE
Sbjct: 261 LQGLPGPAGD-IGPEGPMGRKGERGLPGPPGIQGE 294
>UniRef50_A7KE05 Cluster: Collagen Type XI Alpha2; n=2; Salmo
salar|Rep: Collagen Type XI Alpha2 - Salmo salar
(Atlantic salmon)
Length = 1590
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG-QGE 69
G P P G+N P P +R G GP G QGE
Sbjct: 1031 GSPGPTGENGPPGGPGKRGLAGTRGPEGRQGE 1062
>UniRef50_UPI0000D9B39B Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 402
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -2
Query: 122 SPARRSFNGLPGP--LGQGEHADSFSV-ARVRPRTSKGITDP 6
SPARR +G PGP GE A + + +R R R ++G T+P
Sbjct: 49 SPARRRRSGQPGPSQAQGGEEARALGIFSRERHRQARGDTEP 90
>UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1026
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 173 SRLLGIPRPMGDNCKPQSPARRSFNGLPG 87
S L G P P GD P P R+ GLPG
Sbjct: 283 SALPGFPGPRGDKGLPGLPGRQGLPGLPG 311
>UniRef50_A5WW97 Cluster: Novel protein with Collagen triple helix
repeat (20 copies) domains; n=2; Danio rerio|Rep: Novel
protein with Collagen triple helix repeat (20 copies)
domains - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 449
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG-QGEHADSFSVARVRPRTSKG 18
G P P+G + KP +P + GLPG G +G+ D+ V PR G
Sbjct: 22 GYPGPLGLDGKPGAPGPKGSQGLPGLKGDKGDQGDT-GPRMVFPRYDHG 69
>UniRef50_Q1MX63 Cluster: Type I polyketide synthase-related
protein; n=2; Bacteria|Rep: Type I polyketide
synthase-related protein - Streptomyces sp. NRRL 11266
Length = 2488
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 70 SPWPRGPGNPLKLL-RAGDWGLQLSPIGRGIPSK 168
+P+ R G+P ++ RAGDW Q +P G IP +
Sbjct: 823 NPYIRLDGSPFRIGDRAGDWSRQAAPDGPAIPRR 856
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,099,890
Number of Sequences: 1657284
Number of extensions: 6106621
Number of successful extensions: 14975
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 13779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14965
length of database: 575,637,011
effective HSP length: 59
effective length of database: 477,857,255
effective search space used: 10035002355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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