Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A10
(243 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 33 0.036
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 33 0.036
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 30 0.19
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 30 0.25
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 29 0.44
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 29 0.44
AY099352-1|AAM34494.1| 891|Caenorhabditis elegans gamma-tubulin... 29 0.44
AF040644-3|AAP82651.1| 336|Caenorhabditis elegans Gamma-tubulin... 29 0.44
AF040644-2|AAN63399.1| 963|Caenorhabditis elegans Gamma-tubulin... 29 0.44
AF040644-1|AAB94969.2| 891|Caenorhabditis elegans Gamma-tubulin... 29 0.44
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 29 0.58
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 0.77
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 0.77
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 0.77
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 0.77
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 0.77
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 0.77
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 1.0
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 28 1.0
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 27 1.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 27 1.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 27 1.8
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 27 1.8
Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z66521-19|CAA91404.2| 217|Caenorhabditis elegans Hypothetical p... 27 2.3
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 27 2.3
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 27 2.3
AL031269-4|CAA20335.2| 217|Caenorhabditis elegans Hypothetical ... 27 2.3
AF303256-1|AAG50214.1| 217|Caenorhabditis elegans 2L737 protein. 27 2.3
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 26 3.1
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 26 3.1
AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen stru... 26 3.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 26 3.1
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 26 3.1
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 26 3.1
AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : short... 26 3.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 26 4.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 26 4.1
U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical pr... 26 4.1
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 26 4.1
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 26 4.1
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 26 4.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 26 4.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 26 4.1
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 25 5.4
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 25 5.4
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 25 5.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 25 5.4
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 25 7.1
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 25 7.1
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 25 7.1
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 25 7.1
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 25 7.1
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 25 7.1
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 25 7.1
Z83238-8|CAB05799.2| 355|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81458-5|CAB03825.2| 252|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical pr... 25 9.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 25 9.4
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 25 9.4
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 25 9.4
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 25 9.4
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 25 9.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 25 9.4
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 25 9.4
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 25 9.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 25 9.4
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 32.7 bits (71), Expect = 0.036
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADS 57
G P P G+N +P +PA+ G PGP G A S
Sbjct: 146 GAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGS 180
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G P P R G PGP G
Sbjct: 208 GRPGPQGPAGAPGQPGRSGGAGTPGPQG 235
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 32.7 bits (71), Expect = 0.036
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADS 57
G P P G+N +P +PA+ G PGP G A S
Sbjct: 146 GAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGS 180
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 30.3 bits (65), Expect = 0.19
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPG 87
L G+P P+G + P +P R +GLPG
Sbjct: 750 LPGLPGPVGPDGYPGTPGERGMDGLPG 776
Score = 28.3 bits (60), Expect = 0.77
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPG-PLGQGEH 66
GIP GD+ P P R +GLPG P G G++
Sbjct: 620 GIPGLKGDHGLPGLPGRPGSDGLPGYPGGPGQN 652
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P G N +P SP + GLPG G+
Sbjct: 1289 GLPGAPGLNGEPGSPGQYGMPGLPGGPGE 1317
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLG-QGE 69
+ G+P G++ P P R+ +G+PG G +GE
Sbjct: 1105 ITGMPGLKGESGLPGLPGRQGNDGIPGQPGLEGE 1138
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.9 bits (64), Expect = 0.25
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ----GE--HADSFSVA 45
G P ++C+ +PAR+ G PGP GQ GE H+D+ S A
Sbjct: 183 GYGGPQQNDCQTCAPARQGAPGPPGPAGQPGQPGEPGHSDTSSTA 227
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P GD P +P + S G PGP G
Sbjct: 162 GAPGPQGDAGAPGAPGQGSGAGAPGPAG 189
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.9 bits (64), Expect = 0.25
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADS 57
G P P G N P +PA+ G PGP G A S
Sbjct: 148 GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGS 182
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.9 bits (64), Expect = 0.25
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADS 57
G P P G N P +PA+ G PGP G A S
Sbjct: 148 GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGS 182
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 0.25
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADS 57
G P P G N P +PA G PGP G A S
Sbjct: 146 GNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGS 180
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 29.1 bits (62), Expect = 0.44
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 155 PR-PMGDNCKPQSPARRSFNGLPGPLGQGEH 66
PR P G P P +R +G PGP GQ H
Sbjct: 101 PRCPRGPPGPPGRPGQRGTSGSPGPRGQDNH 131
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 29.1 bits (62), Expect = 0.44
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G P GDN +P +P + F G PG GQ
Sbjct: 183 GAPGAPGDNGQPGTPGQDGFPGQPGADGQ 211
>AY099352-1|AAM34494.1| 891|Caenorhabditis elegans gamma-tubulin
ring protein GRIP-1 protein.
Length = 891
Score = 29.1 bits (62), Expect = 0.44
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 239 SIGSSDGRCVQRAGR*STRAYDSRLLGIPRPMGDNCKPQSPARRSFNGLP 90
SI S R RA S AYD+R+LG+ R + N + + + NG+P
Sbjct: 149 SIADSSSR--SRANS-SFTAYDNRMLGMERQLAGNMAQRPRSPYTINGIP 195
>AF040644-3|AAP82651.1| 336|Caenorhabditis elegans Gamma-tubulin
interacting proteinprotein 1, isoform c protein.
Length = 336
Score = 29.1 bits (62), Expect = 0.44
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 239 SIGSSDGRCVQRAGR*STRAYDSRLLGIPRPMGDNCKPQSPARRSFNGLP 90
SI S R RA S AYD+R+LG+ R + N + + + NG+P
Sbjct: 149 SIADSSSR--SRANS-SFTAYDNRMLGMERQLAGNMAQRPRSPYTINGIP 195
>AF040644-2|AAN63399.1| 963|Caenorhabditis elegans Gamma-tubulin
interacting proteinprotein 1, isoform b protein.
Length = 963
Score = 29.1 bits (62), Expect = 0.44
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 239 SIGSSDGRCVQRAGR*STRAYDSRLLGIPRPMGDNCKPQSPARRSFNGLP 90
SI S R RA S AYD+R+LG+ R + N + + + NG+P
Sbjct: 149 SIADSSSR--SRANS-SFTAYDNRMLGMERQLAGNMAQRPRSPYTINGIP 195
>AF040644-1|AAB94969.2| 891|Caenorhabditis elegans Gamma-tubulin
interacting proteinprotein 1, isoform a protein.
Length = 891
Score = 29.1 bits (62), Expect = 0.44
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 239 SIGSSDGRCVQRAGR*STRAYDSRLLGIPRPMGDNCKPQSPARRSFNGLP 90
SI S R RA S AYD+R+LG+ R + N + + + NG+P
Sbjct: 149 SIADSSSR--SRANS-SFTAYDNRMLGMERQLAGNMAQRPRSPYTINGIP 195
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G N P +PA+ G PGP G
Sbjct: 135 GQPGPKGPNGNPGAPAQPGGQGPPGPPG 162
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P P G P P + F GLPG G+
Sbjct: 577 GLPGPAGRPGSPGPPGQDGFPGLPGQKGE 605
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 176 DSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
D L G+P P+GD P G PGP GQ
Sbjct: 560 DRGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQ 593
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQG 72
L GIP GD+ P P + GL G G G
Sbjct: 1226 LPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMG 1257
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 161 GIPRPMGDNCKP--QSPARRSFNGLPGPLGQ 75
G P G+N P + P S NGLPG GQ
Sbjct: 473 GAPGRKGENGLPGVRGPPGDSLNGLPGAPGQ 503
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G+P G + P R FNGLPG G+
Sbjct: 996 LPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1026
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P P G P P + F GLPG G+
Sbjct: 576 GLPGPAGRPGSPGPPGQDGFPGLPGQKGE 604
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 176 DSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
D L G+P P+GD P G PGP GQ
Sbjct: 559 DRGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQ 592
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQG 72
L GIP GD+ P P + GL G G G
Sbjct: 1225 LPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMG 1256
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 161 GIPRPMGDNCKP--QSPARRSFNGLPGPLGQ 75
G P G+N P + P S NGLPG GQ
Sbjct: 472 GAPGRKGENGLPGVRGPPGDSLNGLPGAPGQ 502
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G+P G + P R FNGLPG G+
Sbjct: 995 LPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1025
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 28.3 bits (60), Expect = 0.77
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPG-PLGQGEH 66
GIP GD+ P P R +GLPG P G G++
Sbjct: 619 GIPGLKGDHGLPGLPGRPGSDGLPGYPGGPGQN 651
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPG 87
L G+P P+G + P +P +GLPG
Sbjct: 749 LPGLPGPVGPDGYPGTPGEPGMDGLPG 775
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P G N +P SP + GLPG G+
Sbjct: 1288 GLPGAPGLNGEPGSPGQYGMPGLPGGPGE 1316
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLG-QGE 69
+ G+P G++ P P R+ +G+PG G +GE
Sbjct: 1104 ITGMPGLKGESGLPGLPGRQGNDGIPGQPGLEGE 1137
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P P G P P + F GLPG G+
Sbjct: 576 GLPGPAGRPGSPGPPGQDGFPGLPGQKGE 604
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 176 DSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
D L G+P P+GD P G PGP GQ
Sbjct: 559 DRGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQ 592
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQG 72
L GIP GD+ P P + GL G G G
Sbjct: 1225 LPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMG 1256
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 161 GIPRPMGDNCKP--QSPARRSFNGLPGPLGQ 75
G P G+N P + P S NGLPG GQ
Sbjct: 472 GAPGRKGENGLPGVRGPPGDSLNGLPGAPGQ 502
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G+P G + P R FNGLPG G+
Sbjct: 995 LPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1025
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P P G P P + F GLPG G+
Sbjct: 577 GLPGPAGRPGSPGPPGQDGFPGLPGQKGE 605
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 176 DSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
D L G+P P+GD P G PGP GQ
Sbjct: 560 DRGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQ 593
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQG 72
L GIP GD+ P P + GL G G G
Sbjct: 1226 LPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMG 1257
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 161 GIPRPMGDNCKP--QSPARRSFNGLPGPLGQ 75
G P G+N P + P S NGLPG GQ
Sbjct: 473 GAPGRKGENGLPGVRGPPGDSLNGLPGAPGQ 503
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G+P G + P R FNGLPG G+
Sbjct: 996 LPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1026
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P P G P P + F GLPG G+
Sbjct: 613 GLPGPAGRPGSPGPPGQDGFPGLPGQKGE 641
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 176 DSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
D L G+P P+GD P G PGP GQ
Sbjct: 596 DRGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQ 629
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQG 72
L GIP GD+ P P + GL G G G
Sbjct: 1262 LPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMG 1293
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 161 GIPRPMGDNCKP--QSPARRSFNGLPGPLGQ 75
G P G+N P + P S NGLPG GQ
Sbjct: 509 GAPGRKGENGLPGVRGPPGDSLNGLPGAPGQ 539
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G+P G + P R FNGLPG G+
Sbjct: 1032 LPGLPGRDGLSGVPGMKGDRGFNGLPGEKGE 1062
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P PMG +P NG+PGP+G
Sbjct: 232 GPPGPMGARGEPGHRGLPGDNGMPGPMG 259
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ-GEHADSFSVARVRPRT 27
G+P PMG RR GLPG G+ G+ S PR+
Sbjct: 253 GMPGPMGPPGYRGDNGRRGAPGLPGRTGRHGKPGGDSSYCPCPPRS 298
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G + P +P R +G PGP G
Sbjct: 149 GPPGPPGQDGIPGNPGRNGEDGAPGPQG 176
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
GIP G N + +P + +G PGP GQ
Sbjct: 158 GIPGNPGRNGEDGAPGPQGPSGPPGPPGQ 186
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G P PMG P + +G PGP G+
Sbjct: 537 GYPGPMGPQGPPGNDGEPGIDGRPGPAGE 565
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G P P G KP P + G PG G+G A
Sbjct: 110 GPPGPGGSPGKPGKPGKPGAPGAPGAAGKGASA 142
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQG 72
G P P G KP P R +G+PG G G
Sbjct: 144 GPPGPSGHPGKPGRPGRPGGHGMPGMPGLG 173
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = -2
Query: 158 IPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADSFSVARVRPRTSKGITDP 6
+P P+G P P G PG GQ A P G+ P
Sbjct: 219 LPGPLGPPGPPGQPGNHGLAGQPGSPGQSVLGGIVGFAAPGPMGPPGLMGP 269
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 176 DSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADSFSVARVRP 33
DS G P G + P P + G PG G EH +S R P
Sbjct: 164 DSGEPGSPGLPGQDAAPGEPGPKGPKGPPGAPGAPEHQESQECPRGEP 211
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G P P G KP P + GLPG G+
Sbjct: 101 LPGPPGPAGTPGKPGRPGKPGAPGLPGNPGR 131
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P GD P P S G PGP G
Sbjct: 146 GSPGPQGDAGAPGQPGFGSGFGAPGPAG 173
>Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical
protein C01H6.1 protein.
Length = 307
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 164 LGIPRPMGDNCKPQSPARRSFNGLPGPLG 78
+G+P P G KP P +G+PG G
Sbjct: 243 MGLPGPAGPEGKPGYPGMLGRDGIPGEPG 271
>Z66521-19|CAA91404.2| 217|Caenorhabditis elegans Hypothetical
protein VW02B12L.4 protein.
Length = 217
Score = 26.6 bits (56), Expect = 2.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 145 WGIIANPNPQHEGV 104
WG+IA P PQH+ +
Sbjct: 29 WGMIARPEPQHDSL 42
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P+G+ P P R G PGP G
Sbjct: 240 GPPGPIGEMGPPGPPGPRGEPGPPGPFG 267
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P+G+ P P R G PGP G
Sbjct: 240 GPPGPIGEMGPPGPPGPRGEPGPPGPFG 267
>AL031269-4|CAA20335.2| 217|Caenorhabditis elegans Hypothetical
protein VW02B12L.4 protein.
Length = 217
Score = 26.6 bits (56), Expect = 2.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 145 WGIIANPNPQHEGV 104
WG+IA P PQH+ +
Sbjct: 29 WGMIARPEPQHDSL 42
>AF303256-1|AAG50214.1| 217|Caenorhabditis elegans 2L737 protein.
Length = 217
Score = 26.6 bits (56), Expect = 2.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 145 WGIIANPNPQHEGV 104
WG+IA P PQH+ +
Sbjct: 29 WGMIARPEPQHDSL 42
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P GD P + S G PGP G
Sbjct: 162 GAPGPQGDAGAPGQAGQGSGAGAPGPAG 189
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -2
Query: 155 PRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
P P G P +P + G PG GQG A
Sbjct: 152 PCPQGPAGAPGAPGPQGDAGAPGQAGQGSGA 182
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P GD P + S G PGP G
Sbjct: 162 GAPGPQGDAGAPGQAGQGSGAGAPGPAG 189
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -2
Query: 155 PRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
P P G P +P + G PG GQG A
Sbjct: 152 PCPQGPAGAPGAPGPQGDAGAPGQAGQGSGA 182
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P GD P + S G PGP G
Sbjct: 162 GAPGPQGDAGAPGQAGQGSGAGAPGPAG 189
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -2
Query: 155 PRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
P P G P +P + G PG GQG A
Sbjct: 152 PCPQGPAGAPGAPGPQGDAGAPGQAGQGSGA 182
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P G N +P SP + GLPG G+
Sbjct: 1032 GLPGAPGLNGEPGSPGQYGMPGLPGGPGE 1060
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLG-QGE 69
+ G+P G++ P P R+ +G+PG G +GE
Sbjct: 848 ITGMPGLKGESGLPGLPGRQGNDGIPGQPGLEGE 881
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 43 RATLKESACSPWPRGP-GNPLKLLRA 117
RAT++E PW RGP GN + + +A
Sbjct: 277 RATVEECLQHPWIRGPEGNAIDIRKA 302
>AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen
structural gene, probablya critical component of the
embryonically derived outerlayer of the L1 cuticle (31.8
kD) (col-59) protein.
Length = 322
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG-QGEHADSFSVARVRPRTSKG 18
G+ P GD + R+ G GP+G +G + D F PRT G
Sbjct: 275 GVQGPTGDQGRKGRAGRKGETGGQGPIGSKGPNGDCFHCP--TPRTPPG 321
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G+ P P +G PGP G
Sbjct: 167 GSPGPQGNAGAPGQPGHGGGSGAPGPAG 194
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 43 RATLKESACSPWPRGP-GNPLKLLRA 117
RAT++E PW RGP GN + + +A
Sbjct: 277 RATVEECLQHPWIRGPEGNAIDIRKA 302
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 149 PMGDNCKPQSPARRSFNGLPGPLG 78
P G N +P +P N LPGP G
Sbjct: 199 PKGPNGEPGAPGTPGGNALPGPPG 222
>AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 14 protein.
Length = 322
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG-QGEHADSFSVARVRPRTSKG 18
G+ P GD + R+ G GP+G +G + D F PRT G
Sbjct: 275 GVQGPTGDQGRKGRAGRKGETGGQGPIGSKGPNGDCFHCP--TPRTPPG 321
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G P P G KP P + G PG G+G A
Sbjct: 105 GPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASA 137
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P P GD P +P + G PG GQ
Sbjct: 179 GLPGPPGDAGAPGAPGQDGAPGHPGADGQ 207
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+P P GD P +P + G PG GQ
Sbjct: 179 GLPGPPGDAGAPGAPGQDGAPGHPGADGQ 207
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G P P G KP P + G PG G+G A
Sbjct: 105 GPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASA 137
>U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical
protein C25F6.4 protein.
Length = 767
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 185 RAYDSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADSFSVA 45
R+ S LL + +C+ P FN P P G+ EH S V+
Sbjct: 448 RSQKSTLLSVSSKSTFSCRAIPPTWTDFNFPPPPEGREEHTYSQPVS 494
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG-QGEHAD 60
G P P GD+ P R NG GP G GE D
Sbjct: 218 GPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGD 252
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG-QGEHAD 60
G P P GD+ P R NG GP G GE D
Sbjct: 282 GPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGD 316
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 170 RLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
RL+ +P P G KP G PGP GQ
Sbjct: 247 RLIPVPGPQGAPGKPGPIGPPGPKGNPGPDGQ 278
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG-QGEHAD 60
G P P GD+ P R NG GP G GE D
Sbjct: 282 GPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGD 316
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 170 RLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
RL+ +P P G KP G PGP GQ
Sbjct: 247 RLIPVPGPQGAPGKPGPIGPPGPKGNPGPDGQ 278
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G P P G KP P + G PG G+G A
Sbjct: 105 GPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASA 137
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G P P G KP P + G PG G+G A
Sbjct: 105 GPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASA 137
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -2
Query: 164 LGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADSFSVARVRPR 30
+G+P GD PA G PGP+G A + + V R
Sbjct: 235 VGLPGARGDPGNNGKPAPPGPEGFPGPVGDLGDAGEYGLRGVPGR 279
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G N +P P + G GP G
Sbjct: 147 GAPGPQGPNGQPGHPGQGGSQGPAGPRG 174
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 25.4 bits (53), Expect = 5.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ-GEHADSFSVARVRPRT 27
G P G + P P R G PG GQ G D+ + A+ P T
Sbjct: 173 GTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLT 218
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G P GDN + S G PGPLG+
Sbjct: 238 GQPGSQGDNGEKGSDGAAGEKGRPGPLGK 266
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 25.4 bits (53), Expect = 5.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ-GEHADSFSVARVRPRT 27
G P G + P P R G PG GQ G D+ + A+ P T
Sbjct: 173 GTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLT 218
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 223 TGGVYKGQGGNQRELMTRAY*E 158
T G YKG G+Q E +T Y E
Sbjct: 32 TDGTYKGDNGSQLERITSYYKE 53
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 223 TGGVYKGQGGNQRELMTRAY*E 158
T G YKG G+Q E +T Y E
Sbjct: 32 TDGTYKGDNGSQLERITSYYKE 53
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G +P P G PGP G
Sbjct: 222 GAPGPQGPPGQPGQPGHDGQPGAPGPKG 249
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G +P P G PGP G
Sbjct: 189 GTPGPQGPPGQPGQPGHDGQPGAPGPKG 216
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G +P P G PGP G
Sbjct: 222 GTPGPQGPPGQPGQPGHDGQPGAPGPKG 249
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G P P + G PGP G
Sbjct: 205 GAPGPQGPAGGPGQPGQSGGAGAPGPAG 232
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G P P + G PGP G
Sbjct: 205 GAPGPQGPAGGPGQPGQSGGAGAPGPAG 232
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G P P G KP +P + G PG G+G A
Sbjct: 120 GPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAA 152
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G P P G KP P + GLPG G+
Sbjct: 101 LPGPPGPAGTPGKPGRPGKPGAPGLPGNPGR 131
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 173 SRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
S L G P P GD P P G PG G+
Sbjct: 300 SSLPGAPGPQGDAGAPGQPGAPGQQGEPGEDGE 332
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G P P G KP P + GLPG G+
Sbjct: 101 LPGPPGPAGTPGKPGRPGKPGAPGLPGNPGR 131
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G P P G+ +P P + G+PG G+
Sbjct: 94 GAPGPTGEPGRPGRPGKPGVPGMPGNPGK 122
>Z83238-8|CAB05799.2| 355|Caenorhabditis elegans Hypothetical
protein T08G3.10 protein.
Length = 355
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 68 VLPGLEARATR*NSFVLGIGVCN 136
VL RA N+F+LGIG+C+
Sbjct: 51 VLTRPSMRALTINNFLLGIGICD 73
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEH 66
G+P G +P S G PGP GQ H
Sbjct: 227 GLPGDQGQAGRPGSDGAPGPQGPPGPPGQQGH 258
>Z81458-5|CAB03825.2| 252|Caenorhabditis elegans Hypothetical
protein C03E10.6 protein.
Length = 252
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 182 AYDSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLG 78
+Y+S + IP P G KP P R G PG G
Sbjct: 33 SYESEIRYIPGPPG---KPGPPGRAGNYGQPGSQG 64
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G P GDN +P P + G PG GQ
Sbjct: 199 GAPGAPGDNGQPGFPGQDGAPGQPGADGQ 227
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G P GDN +P P + G PG GQ
Sbjct: 183 GAPGAPGDNGQPGFPGQDGAPGQPGADGQ 211
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G P P G KP P R G PG G+
Sbjct: 103 LPGPPGPAGAPGKPGKPGRPGAPGTPGTPGK 133
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
G+ P GD P P ++ +G PG G+
Sbjct: 171 GVAGPQGDAGTPGQPGQQGQDGRPGQNGR 199
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G N P +P G PG G
Sbjct: 243 GAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P GD+ P P + G PGP G
Sbjct: 286 GSPGDQGDDGIPGGPGKPGQKGYPGPDG 313
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G N P +P G PG G
Sbjct: 243 GAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G N P +P G PG G
Sbjct: 243 GAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical
protein D2013.7 protein.
Length = 294
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 185 RAYDSRLLGIPRPMGDNCKPQSPARRSFNGLPGPL 81
RAY GIP G +C +P R PG L
Sbjct: 147 RAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGEL 181
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G P P G KP P R G PG G+
Sbjct: 98 LPGPPGPAGAPGKPGKPGRPGAPGTPGTPGK 128
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHADSFSVARVRPRTSKG 18
G P P GDN P + +G PG G S PRT+ G
Sbjct: 241 GPPGPPGDNGPNGEPGKDGEDGAPGAAGNAGAKGSCDHC-PPPRTAPG 287
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 24.6 bits (51), Expect = 9.4
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -2
Query: 221 GRCVQ-RAGR*STRAYDSRLLGIPRPMGDNCKPQSPARRSFNGLPGPLGQGEHA 63
G C+Q GR R + G P GDN + P G PG G GE A
Sbjct: 140 GGCIQCPPGRPGPRGPPGEV-GPAGPSGDNGRKGPPGPPGGPGGPGEGGDGEDA 192
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFN-GLPGPLGQ 75
G P P G + PQ P RS G PGP GQ
Sbjct: 254 GPPGPAGPD-GPQGPEGRSGKQGPPGPTGQ 282
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
+ GI MG+ +P +P GL GP GQ
Sbjct: 194 ITGIKGVMGEVGEPGAPGIPGEEGLSGPTGQ 224
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 167 LLGIPRPMGDNCKPQSPARRSFNGLPGPLGQ 75
L G P P G KP P R G PG G+
Sbjct: 98 LPGPPGPAGAPGKPGKPGRPGAPGTPGTPGK 128
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G N P +P G PG G
Sbjct: 243 GAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLG 78
G P P G N P +P G PG G
Sbjct: 243 GAPGPKGPNGNPGAPGADGNPGAPGQAG 270
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 161 GIPRPMGDNCKPQSPARRSFNGLPGPLGQG 72
G P P GD P P G PG QG
Sbjct: 221 GAPGPAGDAGSPGQPGAPGQPGRPGKNAQG 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,297,488
Number of Sequences: 27780
Number of extensions: 132826
Number of successful extensions: 774
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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