Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A08
(565 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 227 1e-58
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 212 6e-54
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 185 6e-46
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 185 7e-46
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 181 9e-45
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 175 8e-43
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 171 1e-41
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 153 3e-36
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 150 3e-35
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 144 2e-33
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 141 1e-32
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 140 3e-32
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 138 8e-32
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 134 2e-30
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 118 1e-25
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 116 5e-25
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 113 2e-24
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 112 5e-24
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 101 9e-21
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 99 4e-20
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 99 8e-20
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 98 1e-19
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 97 2e-19
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 91 2e-17
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 88 2e-16
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 77 4e-13
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 76 5e-13
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 73 5e-12
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 70 3e-11
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 70 3e-11
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 66 4e-10
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 66 7e-10
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 64 3e-09
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 4e-09
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 61 2e-08
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 60 3e-08
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 52 7e-06
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 44 0.003
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 43 0.004
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.010
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 40 0.030
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 40 0.053
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 39 0.070
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.093
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 39 0.093
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 38 0.12
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.16
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 38 0.16
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 33 0.16
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 37 0.28
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 37 0.37
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 37 0.37
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 37 0.37
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 36 0.49
UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirell... 36 0.65
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 36 0.86
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 36 0.86
UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of str... 35 1.1
UniRef50_Q6NGK5 Cluster: 30S ribosomal protein S2; n=71; Bacteri... 35 1.1
UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep... 35 1.5
UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 34 2.0
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 34 2.0
UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep... 34 2.6
UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster... 33 3.5
UniRef50_O31212 Cluster: 30S ribosomal protein S2; n=13; Actinob... 33 3.5
UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60; Bacteri... 33 3.5
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 33 4.6
UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 33 6.1
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 33 6.1
UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6 prot... 32 8.1
UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n... 32 8.1
UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep... 32 8.1
UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole gen... 32 8.1
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 32 8.1
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 227 bits (555), Expect = 1e-58
Identities = 107/151 (70%), Positives = 120/151 (79%)
Frame = +3
Query: 48 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 227
MSG LD+L + EEDV K LAA THLG N++FQME Y+YKR+ DG ++INL+RTWEK
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 228 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 407
E+PADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 408 LLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
LL+V DP DHQP+TEASYVN+P IALCNTD
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTD 151
Score = 40.7 bits (91), Expect = 0.023
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +1
Query: 502 APLRFVDIAIPCNTKSSHSIG 564
+PLR+VDIAIPCN K +HS+G
Sbjct: 152 SPLRYVDIAIPCNNKGAHSVG 172
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 212 bits (517), Expect = 6e-54
Identities = 98/151 (64%), Positives = 119/151 (78%)
Frame = +3
Query: 48 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 227
MSGGL++L++ E+DVTK+LAA THLG NV+ QM YV+K +GDG +IN+R+TWEK
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 228 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 407
E+PADV V++++ FGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPR
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPR 120
Query: 408 LLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
LLIV D DHQPITEA+YVNIPVIA CNT+
Sbjct: 121 LLIVSDARSDHQPITEAAYVNIPVIAFCNTN 151
Score = 34.7 bits (76), Expect = 1.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 487 YATLTAPLRFVDIAIPCNTKSSHSIG 564
+ +PLR++D+AIPCN +S+G
Sbjct: 147 FCNTNSPLRYIDVAIPCNNMGKNSLG 172
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 185 bits (451), Expect = 6e-46
Identities = 84/149 (56%), Positives = 110/149 (73%)
Frame = +3
Query: 54 GGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXX 233
G ++L ++ED+ ++LAA H+G++N+ +M+ YV+KRR DG H++NL +TWEK
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 234 XXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLL 413
E+PADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL+
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLI 124
Query: 414 IVLDPAQDHQPITEASYVNIPVIALCNTD 500
+V DP D Q I EAS+VNIPVIALC+TD
Sbjct: 125 VVTDPRADAQAIKEASFVNIPVIALCDTD 153
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 185 bits (450), Expect = 7e-46
Identities = 84/155 (54%), Positives = 104/155 (67%)
Frame = +3
Query: 48 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 227
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEK
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 228 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 407
E+PADV +I + QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPR
Sbjct: 61 AARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPR 120
Query: 408 LLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQ 512
LLIV DP DHQP+ E S VNIPVI CNTD Q
Sbjct: 121 LLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQ 155
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 181 bits (441), Expect = 9e-45
Identities = 89/146 (60%), Positives = 101/146 (69%)
Frame = +3
Query: 75 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 254
L+ ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEK
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 255 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 434
+P DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS 128
Query: 435 DHQPITEASYVNIPVIALCNTDCTSQ 512
D Q I EASYVNIPVIAL + D S+
Sbjct: 129 DAQAIKEASYVNIPVIALTDLDSPSE 154
Score = 37.1 bits (82), Expect = 0.28
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 496 LTAPLRFVDIAIPCNTKSSHSIG 564
L +P FVD+AIPCN + HSIG
Sbjct: 149 LDSPSEFVDVAIPCNNRGKHSIG 171
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 175 bits (425), Expect = 8e-43
Identities = 81/144 (56%), Positives = 99/144 (68%)
Frame = +3
Query: 69 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 248
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEK
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 249 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 428
E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDP 131
Query: 429 AQDHQPITEASYVNIPVIALCNTD 500
DHQPI E + NIP+IA C+TD
Sbjct: 132 RTDHQPIKEGALGNIPIIAFCDTD 155
Score = 35.9 bits (79), Expect = 0.65
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 502 APLRFVDIAIPCNTKSSHSIG 564
+P+RFVDI IP N K HSIG
Sbjct: 156 SPMRFVDIGIPANNKGKHSIG 176
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 171 bits (416), Expect = 1e-41
Identities = 78/144 (54%), Positives = 100/144 (69%)
Frame = +3
Query: 69 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 248
++ E D+ MLAA HLG +NV+FQME YV+KRR DG H+INL +TW+K
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 249 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 428
E+P DV ++R +GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDP 150
Query: 429 AQDHQPITEASYVNIPVIALCNTD 500
D QPI+E ++VNIP IA C+TD
Sbjct: 151 RTDAQPISETAFVNIPTIAFCDTD 174
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 153 bits (371), Expect = 3e-36
Identities = 71/142 (50%), Positives = 94/142 (66%)
Frame = +3
Query: 75 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 254
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K +
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 255 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 434
DPA++ V+++R QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVV 134
Query: 435 DHQPITEASYVNIPVIALCNTD 500
D Q I EASYVNIP I+LCN+D
Sbjct: 135 DRQAILEASYVNIPTISLCNSD 156
Score = 33.5 bits (73), Expect = 3.5
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 502 APLRFVDIAIPCNTKSSHSIG 564
A L+F+D+AIPCN K+ SIG
Sbjct: 157 ANLKFIDVAIPCNNKTPMSIG 177
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 150 bits (363), Expect = 3e-35
Identities = 70/148 (47%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Frame = +3
Query: 63 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXX 242
D+L S ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEK
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 243 XXX--EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLI 416
E P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+I
Sbjct: 75 AGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLII 134
Query: 417 VLDPAQDHQPITEASYVNIPVIALCNTD 500
V DP+ DHQ + E+ Y+N+P I N+D
Sbjct: 135 VSDPSVDHQALRESGYINVPTIGFWNSD 162
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 144 bits (348), Expect = 2e-33
Identities = 69/151 (45%), Positives = 92/151 (60%)
Frame = +3
Query: 48 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 227
M+ L E+ + ML A H+G +NV +M YVY R +G H+INL T EK
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 228 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 407
+P +V V+S+R +G RAVLKF+ + G+ PIAGR+ PG TNQI F EPR
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPR 120
Query: 408 LLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
LL+ DP D Q + E+SYV++PVIALC+TD
Sbjct: 121 LLVATDPRTDAQSLRESSYVSLPVIALCDTD 151
Score = 33.1 bits (72), Expect = 4.6
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 502 APLRFVDIAIPCNTKSSHSI 561
+PL +VDIAIPCN K SI
Sbjct: 152 SPLNYVDIAIPCNNKGKESI 171
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 141 bits (341), Expect = 1e-32
Identities = 67/138 (48%), Positives = 88/138 (63%)
Frame = +3
Query: 87 DVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPAD 266
DV K++A H G +N + M+ Y++ R +GT++I+L TWEK E+P D
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 267 VFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQP 446
V V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP D Q
Sbjct: 94 VTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTDQQA 153
Query: 447 ITEASYVNIPVIALCNTD 500
EAS VNIPVIA C+TD
Sbjct: 154 FREASLVNIPVIAFCDTD 171
Score = 33.9 bits (74), Expect = 2.6
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1
Query: 502 APLRFVDIAIPCNTKSSHSI 561
APL FVDIAIPCN + +SI
Sbjct: 172 APLEFVDIAIPCNDRRRYSI 191
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 140 bits (338), Expect = 3e-32
Identities = 74/144 (51%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Frame = +3
Query: 72 ALSEEDVTKM-LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 248
A E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 249 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 428
E+P DV IS+++FG RAV KFA GA + RFTPG FTN F EPRL+IV DP
Sbjct: 66 VEEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDP 125
Query: 429 AQDHQPITEASYVNIPVIALCNTD 500
D Q + EA+Y NIP IALC+TD
Sbjct: 126 NTDSQAVHEAAYANIPCIALCDTD 149
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 138 bits (334), Expect = 8e-32
Identities = 69/154 (44%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
Frame = +3
Query: 63 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXX 242
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 243 XXXEDPADVFVISSRAFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRL 410
E P DV V+SSR GQRAV+KFA +T A+ + R+TPG TNQ +A F+EP+L
Sbjct: 91 AAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQL 150
Query: 411 LIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQ 512
LIV DP D Q I EASYVNIPVIAL N+D Q
Sbjct: 151 LIVTDPHLDRQAIVEASYVNIPVIALTNSDTPLQ 184
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 134 bits (323), Expect = 2e-30
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = +3
Query: 252 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 431
E+ ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP
Sbjct: 149 ENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR 208
Query: 432 QDHQPITEASYVNIPVIALCNTDCTSQIC 518
DHQP+ EASYVN+P IALCNTD S +C
Sbjct: 209 VDHQPLMEASYVNLPTIALCNTD--SPLC 235
Score = 37.5 bits (83), Expect = 0.21
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 502 APLRFVDIAIPCNTKSSHSIG 564
+PL +VDIAIPCN K +HS+G
Sbjct: 232 SPLCYVDIAIPCNNKGAHSVG 252
Score = 33.1 bits (72), Expect = 4.6
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 45 TMSGGLDLLALSEEDVTKMLAATTH 119
TM G D+L ++EEDV K LAA TH
Sbjct: 110 TMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 118 bits (283), Expect = 1e-25
Identities = 55/141 (39%), Positives = 79/141 (56%)
Frame = +3
Query: 78 SEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXED 257
+E D+ K+L H+G M+ YV+K+R DG ++IN+ +T +K E
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 258 PADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 437
P + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ DP D
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISDPLLD 123
Query: 438 HQPITEASYVNIPVIALCNTD 500
Q + EASYVNIPVI++CNTD
Sbjct: 124 KQALLEASYVNIPVISVCNTD 144
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 116 bits (278), Expect = 5e-25
Identities = 54/101 (53%), Positives = 68/101 (67%)
Frame = +3
Query: 180 GTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFT 359
G +INL +TWEK E+P D+ V S+R +GQRAVLKFA +TGA IAGR T
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHT 105
Query: 360 PGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVI 482
PG FTNQ+Q +F EPRLLI+ DP DHQPI E++ P++
Sbjct: 106 PGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALETSPLL 146
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 113 bits (273), Expect = 2e-24
Identities = 61/133 (45%), Positives = 84/133 (63%)
Frame = +3
Query: 99 MLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVI 278
+L A THLG N +F+M +YKR +G ++NL R++EK + P++V VI
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGVI 58
Query: 279 SSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEA 458
SSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP DH + EA
Sbjct: 59 SSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPRADHPFLMEA 118
Query: 459 SYVNIPVIALCNT 497
YVN+ IAL N+
Sbjct: 119 PYVNLLTIALRNS 131
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 112 bits (270), Expect = 5e-24
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Frame = +3
Query: 63 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRG-DGTHVINLRRTWEKXXXXXXX 239
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEK
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 240 XXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 419
+ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV
Sbjct: 70 FCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIV 129
Query: 420 LDPAQDHQPITEASYVNIPVIALCNTD 500
D D Q I E+ Y N+P IA NTD
Sbjct: 130 SDTYADKQAILESQYCNLPTIAFVNTD 156
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 101 bits (243), Expect = 9e-21
Identities = 50/137 (36%), Positives = 78/137 (56%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 269
V L+A H+G + ME++VY+ R +G +V+++R+ E+ DP D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRY-DPQDI 97
Query: 270 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 449
V++SR + R V KFA G+ + GR PG FTN + + EP++L+V DP D Q I
Sbjct: 98 IVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAI 157
Query: 450 TEASYVNIPVIALCNTD 500
EA+ V IP++A +TD
Sbjct: 158 KEAAKVGIPIVAFADTD 174
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 99 bits (238), Expect = 4e-20
Identities = 51/137 (37%), Positives = 77/137 (56%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 269
+ + LAA H+G + M +VY+ R DG +V++++ T E+ DPA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHY-DPARI 98
Query: 270 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 449
V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV DPA D Q +
Sbjct: 99 LVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTDPAGDAQVL 158
Query: 450 TEASYVNIPVIALCNTD 500
EAS + +PV+ALC+T+
Sbjct: 159 KEASSIGVPVVALCDTN 175
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 98.7 bits (235), Expect = 8e-20
Identities = 50/144 (34%), Positives = 81/144 (56%)
Frame = +3
Query: 69 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 248
+ + EE+ K + H+G + + M+ Y++K R DG +++++++T K
Sbjct: 5 MLIPEEEYQK---SGVHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLAR 61
Query: 249 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 428
E P D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP
Sbjct: 62 FE-PQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDP 120
Query: 429 AQDHQPITEASYVNIPVIALCNTD 500
D Q + EA + IP+IALC+ +
Sbjct: 121 LADVQAMKEAVKIGIPIIALCDAN 144
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 98.3 bits (234), Expect = 1e-19
Identities = 43/133 (32%), Positives = 73/133 (54%)
Frame = +3
Query: 102 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 281
LA+ H+G + ME ++Y+ R DG +V+++R+T E+ E P D+ +S
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVS 72
Query: 282 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEAS 461
R + + +F +TG +AGRF PG TN F EP ++ + DP D Q + EA+
Sbjct: 73 RRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEAT 132
Query: 462 YVNIPVIALCNTD 500
+ +P++ LC+T+
Sbjct: 133 EIGVPIVGLCDTE 145
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 97.5 bits (232), Expect = 2e-19
Identities = 50/133 (37%), Positives = 73/133 (54%)
Frame = +3
Query: 102 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 281
LAA +G + + ME ++Y R DG +++++++T E+ DP+ V+S
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARY-DPSKFVVVS 79
Query: 282 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEAS 461
R +G R V KF G P+ GR PG FTN + F E L++V DP D Q + EA
Sbjct: 80 GRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRVDEQAVVEAG 139
Query: 462 YVNIPVIALCNTD 500
+ IPVIALC+TD
Sbjct: 140 TMGIPVIALCDTD 152
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 90.6 bits (215), Expect = 2e-17
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = +3
Query: 291 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 470
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 471 IPVIALCNTD 500
IP IA C+ D
Sbjct: 93 IPTIAFCDID 102
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/140 (34%), Positives = 72/140 (51%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 269
V L A H+G + ME ++++ R DG +V+++ T E+ E P +
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQI 140
Query: 270 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 449
SSR +G+ KFA GA GRF PG TN + EP +++V DP D Q +
Sbjct: 141 LAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIGDAQAV 200
Query: 450 TEASYVNIPVIALCNTDCTS 509
EA V IPVIA+C+++ T+
Sbjct: 201 KEAITVGIPVIAMCDSNNTT 220
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 76.6 bits (180), Expect = 4e-13
Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVN--FQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPA 263
V + +AA LGA N Q +++ R DG + NL+R E+ P+
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PS 76
Query: 264 DVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 443
V V S++ + + + F G P+ GR PG TN + LL+V DP D Q
Sbjct: 77 RVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTDFQ 136
Query: 444 PITEASYVNIPVIALCNTD 500
I EAS IPVIAL +TD
Sbjct: 137 AINEASLTGIPVIALVDTD 155
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 76.2 bits (179), Expect = 5e-13
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Frame = +3
Query: 165 KRRGDGTHVINLRRTWEKXXXXXXXXXXX---EDPADVFVISSRAFGQRAVLKFAAHTGA 335
+R+ DG+ I + WEK ++PA++ V+SSR + AVL FA TGA
Sbjct: 12 RRQADGSFSIG--KKWEKIIFAARILATVVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGA 69
Query: 336 TPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPV 479
IA RFTPG+ TN + F+E R++IV+DP HQ + +A +V+I +
Sbjct: 70 INIADRFTPGSSTNYVTRWFKETRVIIVIDPHVSHQAMHKALFVDIAI 117
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 72.9 bits (171), Expect = 5e-12
Identities = 39/142 (27%), Positives = 65/142 (45%)
Frame = +3
Query: 108 ATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSR 287
A H+G ++ M+ YV K R DG + ++R+ E+ E P ++ V+ R
Sbjct: 13 AGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRR 71
Query: 288 AFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYV 467
+ KF+ T GR+ PG TN + EP ++++ DP D + +A
Sbjct: 72 ETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIMDKNALHDAYES 131
Query: 468 NIPVIALCNTDCTSQIC*HCYP 533
I ++ALC+T+ T C P
Sbjct: 132 GITILALCDTNHTKNYIDFCIP 153
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 70.1 bits (164), Expect = 3e-11
Identities = 34/137 (24%), Positives = 69/137 (50%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 269
++ ++ + ++GA V+F+M+ ++ K++ + + INL T++ +
Sbjct: 7 ISLLIYSQNYIGAAYVDFRMKNHIIKQKNNLNNKINLFTTYKNLIYLPSLLFSISSMRKL 66
Query: 270 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 449
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 67 AIIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRII 126
Query: 450 TEASYVNIPVIALCNTD 500
E S +NIP+I +CNTD
Sbjct: 127 RELSNINIPIIGICNTD 143
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +3
Query: 342 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSD 55
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 66.5 bits (155), Expect = 4e-10
Identities = 36/90 (40%), Positives = 48/90 (53%)
Frame = +3
Query: 117 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 296
HL N + Q++ YVYK++ DG +VIN + V SSR G
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN-----RSFCSQLEPLLPLKTQLMSVVTSSRTTG 55
Query: 297 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQ 386
Q+AVL FAA G+ P +GRFTPG T+Q+Q
Sbjct: 56 QQAVLSFAAAVGSAPTSGRFTPGTLTDQVQ 85
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 65.7 bits (153), Expect = 7e-10
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3
Query: 369 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TD
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTD 73
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 63.7 bits (148), Expect = 3e-09
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Frame = +3
Query: 78 SEEDVTKMLAATT--HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 251
S+++ + L T+ +G + M+ ++ GT+ ++L T +
Sbjct: 7 SDDEYMRNLITTSGISIGTQVKTKFMKQFISDTDPTGTYTLDLEAT-QGRIKAAAQFIEH 65
Query: 252 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 431
+++ V S + + + KFA G I RF PG TN + EP+LL+V DP
Sbjct: 66 TGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQ 125
Query: 432 QDHQPITEASYVNIPVIALCNTD 500
D Q +TEA+ IPVI + N+D
Sbjct: 126 VDAQAVTEATNAGIPVIGIANSD 148
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +3
Query: 306 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 440
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 48 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQM 149
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 162 YKRRGDGTHVINLRRTWEKXXXXXXXXXXX-EDPADVFVISSRAFGQRAVLKFAAHTGAT 338
Y + DGT++ L RTWEK E+ +V +ISS TGA
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANENSTNVRLISSLGTN---------FTGAI 107
Query: 339 PIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 464
P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 108 PTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGT-HVINL 200
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 52.4 bits (120), Expect = 7e-06
Identities = 28/67 (41%), Positives = 33/67 (49%)
Frame = -1
Query: 217 FSHVRRRLITCVPSPRRL*TYVSIWKLTFSAPKWXXXXXXXXXXXXXXXXXSNPPDIVAF 38
FS V RL PS RRL TY SIWKLTFS P+W S PPD++ +
Sbjct: 21 FSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTW 80
Query: 37 VRVTTKR 17
+ T R
Sbjct: 81 KELRTSR 87
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 369 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQI 515
F +++ R P LLIV DP + + EA+ + IPV+ALCNT+ ++
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPEL 210
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 369 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQIC*HCYPMQH 542
F I+ + P +LI++DP D I EA +NIPVIAL NT+ Q+ + P+ +
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNADPQLIDYIIPVNN 256
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.010
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 306 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 467
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 468 NIPVIALC 491
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 40.3 bits (90), Expect = 0.030
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
P +L++ DP ++ +TEA + IPVIALCNT+
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTN 233
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 39.5 bits (88), Expect = 0.053
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +3
Query: 384 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSD 194
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 39.1 bits (87), Expect = 0.070
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 369 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTN 191
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.7 bits (86), Expect = 0.093
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +3
Query: 357 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 38.7 bits (86), Expect = 0.093
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQI 515
P LIV+DP D + EA +NIPVI LC+T+ I
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDI 197
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 38.3 bits (85), Expect = 0.12
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQIC*HCYP 533
P LLIV+DP + + EA + IPV+AL +T+C H P
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIP 203
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 37.9 bits (84), Expect = 0.16
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3
Query: 327 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 443
T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 17 TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 37.9 bits (84), Expect = 0.16
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 369 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDC 503
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+C
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTNC 190
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 33.1 bits (72), Expect(2) = 0.16
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +3
Query: 84 EDVTK--MLAATTHLGAENV--NFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 251
ED+T +LA+ TH+G + N Y+Y R G H+I+L T
Sbjct: 126 EDITLELLLASQTHIGHKTSLWNPANSRYIYGVR-QGVHMISLETTAAHLRRAARVVEEV 184
Query: 252 EDPADVFVISSRAFGQRAVLKFAAH-TGATPIAGRFTPGAFTNQ 380
A + + GQ ++ AA GA + ++TPG TN+
Sbjct: 185 AYNAGLILFVGNRKGQMEIVTQAAEMAGACHLFTKWTPGGITNR 228
Score = 23.8 bits (49), Expect(2) = 0.16
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
P L++ L+P +++ + E +IP I + +T+
Sbjct: 262 PDLVVCLNPLENYTLLYECGLKSIPTIGVIDTN 294
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 37.1 bits (82), Expect = 0.28
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +3
Query: 396 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDC 503
R+P +L+V+D ++ + EA +NIP+++L +T+C
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNC 191
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 36.7 bits (81), Expect = 0.37
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDC 503
P ++ V+DP ++H + EA + IPV+A+ +T+C
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTNC 195
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 36.7 bits (81), Expect = 0.37
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 396 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
+ P L+I L+P Q+ PI EA +NIP+IAL +++
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSN 399
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 36.7 bits (81), Expect = 0.37
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 32/169 (18%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQ--METYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPA 263
+ K++AA HLG +F+ M+ ++Y D H+I+L +T EK +
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIY-DKVHIIDLNKTLEKLTLACKVIEGVVEKG 296
Query: 264 DVFVI----SSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN---------QIQAAFR-- 398
V + + + Q A++K + + + R+ PG TN QI+
Sbjct: 297 GVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIKTKMEVD 356
Query: 399 ---------------EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
+P L+++L+P ++ I E IP I LC+TD
Sbjct: 357 MKDQKITTKNSNKIIKPDLVVLLNPVENRNCIKECISAGIPTIGLCDTD 405
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 36.3 bits (80), Expect = 0.49
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQIC*HCYP 533
P+++I+ DP + I EA + IPVIA+CNT+ + + P
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDLVDYVIP 306
>UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirellula
marina DSM 3645|Rep: Ribosomal protein S2 -
Blastopirellula marina DSM 3645
Length = 243
Score = 35.9 bits (79), Expect = 0.65
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 375 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDC 503
N ++ R P L+++DP ++ I EA + I +AL +TDC
Sbjct: 153 NGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVALTDTDC 195
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 35.5 bits (78), Expect = 0.86
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 399 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
+P LL+V+D ++H I EA +NIPV+A+ +T+
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTN 194
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 35.5 bits (78), Expect = 0.86
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 369 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQIC*HCYP 533
F I+ R P + V+DP ++ + EA+ + IPVIAL +TD + + P
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIVP 201
>UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 427
Score = 35.1 bits (77), Expect = 1.1
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +3
Query: 78 SEEDVTKMLAATTHLG--AENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 251
+E VT +LAA HLG E + + ++Y R DG +I+L +T +
Sbjct: 171 TEATVTSLLAAGAHLGHAVELGHVNNQPFIYGVR-DGISIIDLEQTVTQLRRAARITEAV 229
Query: 252 EDPADVFVISSRAFGQRAVLK-FAAHTGATPIAGRFTPGAFTN 377
+ + GQ+ L+ + GA+ + ++ PGA TN
Sbjct: 230 AKQNGLILFVGTRDGQKLALEAMSRRCGASYVHSKWIPGAITN 272
>UniRef50_Q6NGK5 Cluster: 30S ribosomal protein S2; n=71;
Bacteria|Rep: 30S ribosomal protein S2 - Corynebacterium
diphtheriae
Length = 266
Score = 35.1 bits (77), Expect = 1.1
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 396 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQI 515
+ P + V+D ++H ++EA +NIPV+A+ +T+C +
Sbjct: 157 KTPSAMWVVDTNKEHIAVSEAHKLNIPVVAILDTNCDPDV 196
>UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep:
Ribosomal protein S2 - Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129)
Length = 306
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 396 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQIC*HCYP 533
R P + V+DP ++ + EA+ + IPV+AL +T+C + + P
Sbjct: 159 RLPGAVYVVDPKREELLVREANRLRIPVVALTDTNCDPDVIDYVIP 204
>UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Anaeromyxobacter sp. Fw109-5
Length = 315
Score = 34.3 bits (75), Expect = 2.0
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 381 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDC 503
I+ R P + V+D ++H + EA+ + IPV+A+ +T+C
Sbjct: 159 IKEMSRLPAAIFVIDTKKEHIAVHEANRLGIPVVAVVDTNC 199
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 34.3 bits (75), Expect = 2.0
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
P + V+DP ++H ++EA+ + +PV+AL +T+
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTN 206
>UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep:
Ribosomal protein S2 - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 291
Score = 33.9 bits (74), Expect = 2.6
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +3
Query: 396 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQIC*HCYP 533
R P+L+ ++DP +++ + E + IP++A+ +T+C + + P
Sbjct: 156 RLPQLIFIIDPHRENIAVKEGRKLGIPIMAVTDTNCDPDLIDYIIP 201
>UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 594
Score = 33.5 bits (73), Expect = 3.5
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 273 VISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE----PRLLIVLDPAQDH 440
V SR+ Q V++ A GA P+AG A ++++ A R+ PRL+I+ + DH
Sbjct: 182 VEQSRSALQFVVVQEAESQGAAPLAGVAVVQATPDEVEEARRQDLTVPRLIILEEVQADH 241
Query: 441 QPITEASYVNIP 476
+T + ++P
Sbjct: 242 PEVTADAIRDVP 253
>UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster|Rep:
CG9817-PA - Drosophila melanogaster (Fruit fly)
Length = 2090
Score = 33.5 bits (73), Expect = 3.5
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 366 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQ 229
HQ+ + QQL +Q QQ QH Q H + Q QL +QQH Q
Sbjct: 968 HQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDPQQQHPQ 1013
>UniRef50_O31212 Cluster: 30S ribosomal protein S2; n=13;
Actinobacteria (class)|Rep: 30S ribosomal protein S2 -
Streptomyces coelicolor
Length = 310
Score = 33.5 bits (73), Expect = 3.5
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 381 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQIC*HCYP 533
I+ + P + ++D ++H + EA +NIPV+A+ +T+C H P
Sbjct: 152 IREMSKVPSAVWIVDTKKEHIAVGEARKLNIPVVAILDTNCDPDEVDHKIP 202
>UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60;
Bacteria|Rep: 30S ribosomal protein S2 - Nocardia
farcinica
Length = 285
Score = 33.5 bits (73), Expect = 3.5
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDC 503
P + V+D ++H + EA +NIPVIA+ +T+C
Sbjct: 158 PSAIWVVDTNKEHIAVGEARKLNIPVIAILDTNC 191
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 33.1 bits (72), Expect = 4.6
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 369 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T+
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTN 190
>UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Paracoccus denitrificans (strain
Pd 1222)
Length = 261
Score = 32.7 bits (71), Expect = 6.1
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 402 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCT 506
P LL V+D ++ I EA + IPV+A+ +T+C+
Sbjct: 161 PDLLFVIDVNKEDLAIAEAKKLGIPVVAVVDTNCS 195
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 32.7 bits (71), Expect = 6.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 399 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
+P L+++L+P ++ I E IP I LC+TD
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTD 395
>UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Ncoa6 protein - Strongylocentrotus
purpuratus
Length = 2349
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 336 LRQCGQQI*AQHAGQMHVMR*QT-HQLDPPRRQQHEQR 226
L+Q Q + QHA Q H ++ Q HQL + QQH+Q+
Sbjct: 498 LQQLQQHLQQQHAQQQHQLQQQVHHQLQQQQHQQHQQQ 535
>UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n=1;
Gallus gallus|Rep: UPI00004488FF UniRef100 entry -
Gallus gallus
Length = 107
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 424 SKTINSLGSRNAAWIWLVN-APGVKRPAIGVAPVWAANLS 308
S TI + S ++W+ LV PG + P +G AP W ++LS
Sbjct: 2 SLTIWDVCSAASSWLSLVGFRPGSEAPCVGTAPGWGSSLS 41
>UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep:
Ribosomal protein S2 - Desulfuromonas acetoxidans DSM
684
Length = 256
Score = 32.3 bits (70), Expect = 8.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 381 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDC 503
I+ + P + V+DP ++ + EA + IPV+A+ +T+C
Sbjct: 151 IKGMTKLPGAMFVIDPKKEAIAVCEAKKLGIPVVAVVDTNC 191
>UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_40, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 130
Score = 32.3 bits (70), Expect = 8.1
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 288 AFGQRAVLKFAAHTGATPIAGRFTP 362
A GQ AVLK +TGA +AGR TP
Sbjct: 101 AAGQGAVLKLVRYTGAHAVAGRHTP 125
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 390 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDCTSQ 512
+F P + I L +QPI EA+ N P+IA C+TD Q
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQ 101
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 32.3 bits (70), Expect = 8.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 399 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
+P LL+VL+P ++ + EA +P IA+ +TD
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTD 349
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,655,001
Number of Sequences: 1657284
Number of extensions: 10378729
Number of successful extensions: 24224
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 23414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24155
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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