Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A08
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 196 1e-50
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 0.33
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 0.33
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 0.33
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 0.33
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 29 3.1
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 29 3.1
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 4.0
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 28 4.0
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 196 bits (477), Expect = 1e-50
Identities = 89/151 (58%), Positives = 112/151 (74%)
Frame = +3
Query: 48 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 227
MSGG AL+EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 228 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 407
E+PADV V+S+R + QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 408 LLIVLDPAQDHQPITEASYVNIPVIALCNTD 500
LL++ DP DHQ +TEASYV +PVI+ NT+
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTE 151
Score = 33.1 bits (72), Expect = 0.14
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 487 YATLTAPLRFVDIAIPCNTKSSHSIG 564
+ +PL+ +DI +PCN K SIG
Sbjct: 147 FVNTESPLKLIDIGVPCNNKGERSIG 172
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 285 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 455
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 18 RLVVTLTNATMSGGLDLLALSEED-VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVI 194
R+V T + LL +S D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 18 RLVVTLTNATMSGGLDLLALSEED-VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVI 194
R+V T + LL +S D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 112 PPIWERKMLISRWRRTFINAVVTVRT 189
PP + RK+L + WR +++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 112 PPIWERKMLISRWRRTFINAVVTVRT 189
PP + RK+L + WR +++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 207 YAED*LRAYRHHGVYKRTSPSGN*HFPLPNGWSPQA 100
+A+D Y HH V ++ SPS N + G+SP A
Sbjct: 1838 WADDHDLTYTHHDVVRQESPSFNCNISPIKGYSPPA 1873
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 252 EDPADVFVISSRAFGQRAVLKFAAHTGATPIA 347
EDP V +S F +R ++KF A G PI+
Sbjct: 13 EDPV-VSQVSGHIFDRRLIVKFIAENGTDPIS 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,406,428
Number of Sequences: 27780
Number of extensions: 244116
Number of successful extensions: 599
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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