Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A07
         (336 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181653-1|AAD55438.1|  998|Drosophila melanogaster BcDNA.LD2363...    27   8.0  
AE014298-768|AAF46056.1|  998|Drosophila melanogaster CG4119-PA ...    27   8.0  

>AF181653-1|AAD55438.1|  998|Drosophila melanogaster BcDNA.LD23634
           protein.
          Length = 998

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 47  EKDASGENKLNVKFEPGELREAARTFEEARGKIKK-YTP 160
           EK+A    +L  KF  GE    +  FE+AR +I+K Y P
Sbjct: 536 EKEAEELAELKSKFFSGEYENPSLEFEKARLEIEKLYEP 574


>AE014298-768|AAF46056.1|  998|Drosophila melanogaster CG4119-PA
           protein.
          Length = 998

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 47  EKDASGENKLNVKFEPGELREAARTFEEARGKIKK-YTP 160
           EK+A    +L  KF  GE    +  FE+AR +I+K Y P
Sbjct: 536 EKEAEELAELKSKFFSGEYENPSLEFEKARLEIEKLYEP 574


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,678,346
Number of Sequences: 53049
Number of extensions: 148268
Number of successful extensions: 409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)