Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A06
         (380 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58244| Best HMM Match : MpPF26 (HMM E-Value=9.9)                    27   3.9  
SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.8  
SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11)                 27   6.8  
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.0  

>SB_58244| Best HMM Match : MpPF26 (HMM E-Value=9.9)
          Length = 125

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +2

Query: 2   HEEVLCECVLKKGVTVKNETQVSNLMALVKMNEVSAKELLVCPIIAITILESTISL 169
           H+E L E V KKGV +   +     M ++    +    L++  II I+I+    SL
Sbjct: 13  HQEALGELVYKKGVAINLPSPFIITMFIIITTTIIITFLVITIIIIISIIIINTSL 68


>SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 610

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +2

Query: 8   EVLCECVLKKGVTVKNETQVSNLMALVKMNEVSAKELLVCPIIAITILEST 160
           ++L E   K+ +  K E ++ N+   ++  +  A+ + VCP   +   EST
Sbjct: 428 DLLAEVNRKRALLKKKERKLRNIRKRIEKKKKEAEMVNVCPNQQVNTTEST 478


>SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
          Length = 323

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 5   EEVLCECVLKKGVTVKNETQVSNLMALVKMNEVSAKEL 118
           EE+ CE  L KGV  KN+ Q   +  L    E++  EL
Sbjct: 278 EELACELELAKGVLEKNQEQQQLIEELTCELELAKGEL 315


>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 436

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 2   HEEVLCECVLKKGVTVKN 55
           H + LCE ++K+G+TV+N
Sbjct: 359 HLKQLCERIIKQGITVEN 376


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,812,796
Number of Sequences: 59808
Number of extensions: 158643
Number of successful extensions: 372
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 644574580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)