Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A06
         (380 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    28   0.043
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   1.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   3.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   4.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   8.5  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    20   8.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    20   8.5  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    20   8.5  

>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 0.043
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 35  KGVTVKNETQVSNLMALVKMNEVSAKELLV 124
           +G T K ETQV++ + + ++ E S  ELLV
Sbjct: 88  EGNTFKTETQVNDSLKVTRLYEFSDNELLV 117


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 312 LKTGREWRQHLELTSST 262
           + TG++WR H +L + T
Sbjct: 128 ISTGQKWRNHRKLIAPT 144


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 262 ETLDLSIILNTLHHPQEKK*NKKY 191
           ETL   + +  +H PQ  K N+ +
Sbjct: 350 ETLQTVVAMKMMHLPQSNKMNRMH 373


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 329 LPAPANLKQD 300
           LPAPAN K+D
Sbjct: 392 LPAPANWKKD 401


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 121 GMSDNSDNNFRIDYFVIIN 177
           G S   D N  +DYF  IN
Sbjct: 299 GPSSVIDTNTGVDYFTQIN 317


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 130 DNSDNNFRIDYFVIINV 180
           +N +NN++  Y+ IIN+
Sbjct: 325 NNYNNNYKPLYYNIINI 341


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 127 SDNSDNNFRIDYFVIINV 180
           ++N+ NN++  Y+ IIN+
Sbjct: 342 NNNNYNNYKKLYYNIINI 359


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 153 NRLFRYNKCNKVIYFLFYFFS 215
           N  + YN  NK +Y+  Y  +
Sbjct: 328 NYKYNYNNYNKKLYYKNYIIN 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,058
Number of Sequences: 438
Number of extensions: 1728
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)