Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A05
(267 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-05
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.19
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 30 0.26
SB_20195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.59
SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.0
SB_27464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_10123| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_59241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_55004| Best HMM Match : rve (HMM E-Value=8.7e-30) 28 1.4
SB_45972| Best HMM Match : Ribosomal_L21e (HMM E-Value=9) 28 1.4
SB_8458| Best HMM Match : Ribosomal_L21e (HMM E-Value=9) 28 1.4
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_6877| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 27 1.8
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 27 1.8
SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2) 27 2.4
SB_47665| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_36313| Best HMM Match : Crl (HMM E-Value=5.1) 27 2.4
SB_35201| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_30312| Best HMM Match : rve (HMM E-Value=5.6e-15) 27 2.4
SB_27207| Best HMM Match : eIF-5a (HMM E-Value=3.1e-15) 27 2.4
SB_22626| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_19584| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_8339| Best HMM Match : rve (HMM E-Value=5.4e-31) 27 2.4
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 27 2.4
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 27 2.4
SB_8293| Best HMM Match : zf-C2H2 (HMM E-Value=0.32) 27 2.4
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23) 27 3.1
SB_8223| Best HMM Match : RVT_1 (HMM E-Value=4e-27) 27 3.1
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_34339| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 26 5.5
SB_48571| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_48395| Best HMM Match : MAM (HMM E-Value=0) 26 5.5
SB_57776| Best HMM Match : EB (HMM E-Value=2.9) 25 7.3
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 25 7.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 25 7.3
SB_13701| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 25 7.3
SB_52514| Best HMM Match : DUF1086 (HMM E-Value=1.3) 25 7.3
SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 25 7.3
SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 25 7.3
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 25 7.3
SB_1619| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 25 9.6
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 25 9.6
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 25 9.6
SB_4274| Best HMM Match : LRV (HMM E-Value=5.7) 25 9.6
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 43.2 bits (97), Expect = 3e-05
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +3
Query: 3 TRARLIAPAARTAIFSNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKDIDSA 179
T AR +A RT TA +RP + +VP +P + A R FQT+S +D+DSA
Sbjct: 47 TLARNLAGHGRTLA---TAAIRPQSQALVKA-VVPASPLLGALASRGFQTSSAVQDVDSA 102
Query: 180 AKFXXXXXXXXXXXXXXXXXXXXFGSLII 266
AKF FGSLII
Sbjct: 103 AKFIGAGAATVGAAGSGAGIGTVFGSLII 131
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPA 119
+A+T + S NT LVRPL +P T P +PA
Sbjct: 1211 SAKTIVSSCLNTLLVRPLETIPAPTPTTPTSPA 1243
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+ART + S T LVRPL P P +PA ++V +T K+ S A
Sbjct: 8 SARTIVSSCLATLLVRPLETTPAPAPTTPTSPATPASVAPIRTPIPLKETPSPA 61
>SB_20195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1351
Score = 29.1 bits (62), Expect = 0.59
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+A+T + S T LVRPL +P T P +PA ++ +T K+ + A
Sbjct: 230 SAKTIVSSCLATLLVRPLETIPAPTPTTPTSPATPASGPPIRTPIPVKETSTTA 283
>SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -2
Query: 107 WNNLCVCRHCCEWSHKSC----VAEDSSPGCRGDQSCPR 3
W C+CR +W H+SC + E + SCP+
Sbjct: 40 WVKPCLCRGTTKWVHQSCLQRWIDEKQAGNSAATVSCPQ 78
>SB_27464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKD 167
S T + P+AA P TQ VP+A + R QT S D
Sbjct: 58 STTPICEPVAATPDDTQSVPIATTESRYPTRVRQTPSHLND 98
>SB_10123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKD 167
S T + P+AA P TQ VP+A + R QT S D
Sbjct: 640 STTPICEPVAATPDDTQSVPIATTESRYPTRVRQTPSHLND 680
>SB_59241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKD 167
S T + P+AA P TQ VP+A + R QT S D
Sbjct: 48 STTPICEPVAATPDDTQSVPIATTESRYPTRVRQTPSHLND 88
>SB_55004| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 682
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKD 167
S T + P+AA P TQ VP+A + R QT S D
Sbjct: 639 STTPICEPVAATPDDTQSVPIATTESRYPTRVRQTPSHLND 679
>SB_45972| Best HMM Match : Ribosomal_L21e (HMM E-Value=9)
Length = 246
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKD 167
S T + P+AA P TQ VP+A + R QT S D
Sbjct: 203 STTPICEPVAATPDDTQSVPIATTESRYPTRVRQTPSHLND 243
>SB_8458| Best HMM Match : Ribosomal_L21e (HMM E-Value=9)
Length = 195
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKD 167
S T + P+AA P TQ VP+A + R QT S D
Sbjct: 152 STTPICEPVAATPDDTQSVPIATTESRYPTRVRQTPSHLND 192
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+A+T + S T LVRPL +P P++PA ++ +T K+ +AA
Sbjct: 626 SAKTIVSSCLATLLVRPLETIPAPAPTKPISPATPASGPPTRTPIPLKETPTAA 679
>SB_6877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPA 119
+A+T + S T LVRPL +P T P +PA
Sbjct: 98 SAKTIVSSCLATLLVRPLETIPAPTPTTPTSPA 130
>SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 164 RH*LCCQIHWCWRSDSWS 217
R+ CCQ H WRSDS S
Sbjct: 251 RYFTCCQGHLTWRSDSGS 268
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+ART + S T LVRPL P P +PA ++ +T K+ S A
Sbjct: 15 SARTIVSSCLATLLVRPLETTPAPAPTTPTSPATPASGAPIRTPIPLKETPSPA 68
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ PL +VP +T ++P A +A T + V
Sbjct: 78 ANSTMILPLTSVPYNTTLIPAPNATSTAATTMSPSYV 114
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ PL +VP +T ++P A +A T + V
Sbjct: 480 ANSTMILPLTSVPYNTTLIPAPNATSTAATTMSPSYV 516
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T + V
Sbjct: 279 ANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSYV 315
>SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2)
Length = 369
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 95 CVCRHCCEWSHKSCVAEDSSPGC 27
C+C CCE K A+D S GC
Sbjct: 346 CICVMCCECKKKD--AKDGSAGC 366
>SB_47665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 19 STTPICEPVAATPDDTQSVPIATTE 43
>SB_36313| Best HMM Match : Crl (HMM E-Value=5.1)
Length = 442
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 54 TALVRPLAAVPTHTQIVPVAPA 119
T LVRPL +P T P +PA
Sbjct: 115 TLLVRPLETIPAPTPTTPTSPA 136
>SB_35201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 181 STTPICEPVAATPDDTQSVPIATTE 205
>SB_30312| Best HMM Match : rve (HMM E-Value=5.6e-15)
Length = 385
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 348 STTPICEPVAATPDDTQSVPIATTE 372
>SB_27207| Best HMM Match : eIF-5a (HMM E-Value=3.1e-15)
Length = 710
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 548 STTPICEPVAATPDDTQSVPIATTE 572
>SB_22626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 58 STTPICEPVAATPDDTQSVPIATTE 82
>SB_19584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 19 STTPICEPVAATPDDTQSVPIATTE 43
>SB_8339| Best HMM Match : rve (HMM E-Value=5.4e-31)
Length = 351
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 308 STTPICEPVAATPDDTQSVPIATTE 332
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 1097 STTPICEPVAATPDDTQSVPIATTE 1121
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 1254 STTPICEPVAATPDDTQSVPIATTE 1278
>SB_8293| Best HMM Match : zf-C2H2 (HMM E-Value=0.32)
Length = 316
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQ 122
S T + P+AA P TQ VP+A +
Sbjct: 58 STTPICEPVAATPDDTQSVPIATTE 82
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 54 TALVRPLAAVPTHTQIVPVAPA 119
T LVRPL +P T P +PA
Sbjct: 213 TLLVRPLETIPAPTLTTPTSPA 234
>SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23)
Length = 684
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 89 CRHCCEWSHKSCVAEDSSPGCRGDQSC 9
C C +W H SCV PG GD C
Sbjct: 635 CDSCDKWYHGSCVGVLDDPG--GDWYC 659
>SB_8223| Best HMM Match : RVT_1 (HMM E-Value=4e-27)
Length = 1307
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/36 (30%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 RGQD*SPLQPGLLSSATQLLCDHSQQC-LHTHRLFQ 108
+G+D P + +++A+++L D SQ+C +++ R++Q
Sbjct: 997 KGRDWKPFRCWPMNNASRILNDGSQRCGIYSQRMYQ 1032
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLS-AVRTFQTTSVTKD 167
S T + P+A P TQ VP+A + R QT S D
Sbjct: 1786 STTPICEPVATTPDDTQSVPIATTESRYPTRVRQTPSHLND 1826
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -2
Query: 110 NWNNLCV-CRHCCEWSHKSC 54
N N+L + C HC W H SC
Sbjct: 888 NLNDLMIQCLHCDRWLHGSC 907
>SB_34339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 37 LLSSATQLLCDHSQQC 84
LL+S+T LCDH +C
Sbjct: 228 LLNSSTSYLCDHQSRC 243
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 101 NLCVCRHCCEWSHKSCVAEDSSPGCRGDQSCPR 3
N C +C + SC A+D C + CP+
Sbjct: 1347 NPCEGFNCSSPPYSSCQAKDGKATCECSEDCPK 1379
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+A+T + S T LVRPL +P P +PA ++ +T K+ + A
Sbjct: 66 SAKTIVSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIRTPIPLKETPNPA 119
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 113 CNWNNLCVCRHCCEWSHK 60
CN N C+C+ C SHK
Sbjct: 815 CNDCNSCICQKCALTSHK 832
>SB_48571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 236 TRSGSSYSNCRCASTNEFGSRVNVFGDRGGLEG 138
T S + R T FG +VN+ G LEG
Sbjct: 16 TNENVSENTSRATFTKNFGCQVNICGASASLEG 48
>SB_48395| Best HMM Match : MAM (HMM E-Value=0)
Length = 901
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -2
Query: 110 NWNNLCVCRHCC-EWSHKSCVAEDSSPGCRG 21
NW C C ++ + C AED + C G
Sbjct: 652 NWGAFGPCSETCYKYRQRFCTAEDKAANCPG 682
>SB_57776| Best HMM Match : EB (HMM E-Value=2.9)
Length = 669
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 122 LSRCNWNNLCVCRHCCEWSHK 60
LS N N+ CVC + C W K
Sbjct: 427 LSTFNCNHHCVCWYYCYWKPK 447
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 25.4 bits (53), Expect = 7.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 98 LCVCRHCCEWSHKSCV 51
+ +C C EW H SCV
Sbjct: 1196 MLMCELCKEWFHSSCV 1211
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 27 AARTAIFSNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTK 164
A T + T V P VPT T +VP L ++T+ T+
Sbjct: 345 APETTVSQETT-VAPETTVPTETTVVPETTPALETTSAPESTAATE 389
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 69 PLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSA 179
P +AVPT P A LSA +TS + I SA
Sbjct: 570 PSSAVPTPATAPPPVAATLSAPPPLDSTSGSSTISSA 606
>SB_13701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 69 PLAAVPTHTQIVPVAPAQLSAVRTFQTT 152
PLAA +H ++P +PAQL + + T
Sbjct: 371 PLAAPHSHLPLLPYSPAQLQKLYSLLDT 398
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T T V
Sbjct: 899 ANSTMILPSTSVPYNTTLIPGPNATSTAATTMSPTYV 935
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T + V
Sbjct: 95 ANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSYV 131
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T + V
Sbjct: 296 ANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSYV 332
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T + V
Sbjct: 1100 ANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSYV 1136
>SB_52514| Best HMM Match : DUF1086 (HMM E-Value=1.3)
Length = 334
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 39 AIFSNTALVRPLAAVPTHTQIVPVAPAQLSAV 134
AIF NTAL+ PL+A T IV LS+V
Sbjct: 182 AIFKNTALLSPLSAT-TIAAIVTSLGKSLSSV 212
>SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 25.4 bits (53), Expect = 7.3
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = -2
Query: 80 CCEWSHKSCVAEDSSPGCRGD 18
CC W H C + D GD
Sbjct: 314 CCSWRHGRCCSCDKDDAALGD 334
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 25.4 bits (53), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 77 CEWSHKSCVAEDSSPGCRGDQSCPR 3
C+ + +CV+ D +P C + CP+
Sbjct: 1050 CDAPYATCVSVDGTPTCVCPRRCPK 1074
>SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 211
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+A+T + S T LVRPL P P +PA ++ + K+ S A
Sbjct: 142 SAKTIVSSCLATLLVRPLETAPAPAPTTPTSPATPASAAPIRAPIPLKETPSPA 195
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 27 AARTAIFSNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTK 164
A T + T V P VPT T +VP L ++T+ T+
Sbjct: 2041 APETTVSQETT-VAPETTVPTETTVVPETTPALETTSAPESTAATE 2085
>SB_1619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 83 HCCEWSHKSCVAEDSSPGCRGDQSC 9
+C W+ +SCVA + S CR C
Sbjct: 210 YCISWNRESCVAPNPS-ACRFTHLC 233
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 25.0 bits (52), Expect = 9.6
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 65 HKSCVAEDSSPGCRGDQSCP 6
H +C+ +D P C CP
Sbjct: 861 HSTCIVQDGIPTCACTMQCP 880
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T + V
Sbjct: 296 ANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSYV 332
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T + V
Sbjct: 497 ANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSYV 533
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 48 SNTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSV 158
+N+ ++ P +VP +T ++P A +A T + V
Sbjct: 698 ANSTMILPSTSVPYNTTLIPAPNATSTAATTMSPSYV 734
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 54 TALVRPLAAVPTHTQIVPVAPA 119
T LVRPL +P P +PA
Sbjct: 117 TLLVRPLETIPAPAPTTPTSPA 138
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFS--NTALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+A+T + S T LVRPL P P +PA ++ +T K+ + A
Sbjct: 15 SAKTIVSSCLATLLVRPLETTPAPAPTTPTSPATPASGAPIRTPIPLKETPTPA 68
>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3003
Score = 25.0 bits (52), Expect = 9.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = -2
Query: 251 EYRSNTRSGSSYSNCRCASTNEFGSRV---NVFGDRGGLEGAHS**LSRCN 108
+Y S T GS + E GS V ++ GDRGG E H S C+
Sbjct: 1207 QYVSQTGPGSESGGSADSIAVEPGSSVATASIDGDRGGSETGHRSTSSHCS 1257
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 27 AARTAIFSNTA--LVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVTKDIDSAA 182
+A+T + S A LVRPL +P P +PA ++ +T K+ + A
Sbjct: 407 SAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIRTPIPLKETPTPA 460
>SB_4274| Best HMM Match : LRV (HMM E-Value=5.7)
Length = 327
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 251 EYRSNTRSGSSYSNCRCAS-TNEFGSRVNVF 162
+Y S+ SG +YS+ CAS +N S N++
Sbjct: 263 DYSSSLASGFNYSDTSCASASNSTSSGFNLY 293
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,172,187
Number of Sequences: 59808
Number of extensions: 152571
Number of successful extensions: 827
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 16,821,457
effective HSP length: 65
effective length of database: 12,933,937
effective search space used: 297480551
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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