Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_A04
(591 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 317 1e-88
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 1.4
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 25 1.4
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 24 4.2
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 23 7.4
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 23 7.4
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 7.4
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 9.8
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 23 9.8
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 23 9.8
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 23 9.8
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 23 9.8
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 23 9.8
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 23 9.8
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 23 9.8
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 23 9.8
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 9.8
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 9.8
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 9.8
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 23 9.8
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 23 9.8
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 317 bits (779), Expect = 1e-88
Identities = 142/177 (80%), Positives = 156/177 (88%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 419
TCQ+AY RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG D+LY
Sbjct: 61 TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120
Query: 420 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 590
G T+VTG+EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGGLN+PHS+
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSV 177
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 25.4 bits (53), Expect = 1.4
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 420 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK--GAVDGGLNVP 581
G T+ +GD+ ++ DNG G + TG+ G+ G++ GG P
Sbjct: 2011 GGTDASGDDLEIDACDNGCGGGNGNENDDSGDGATGSGDNGSQHGGGSISGGGGTP 2066
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 25.4 bits (53), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Frame = -3
Query: 589 IECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLN-------APGPLSTGSTLYSSPVT 431
+ G PP+T A T AP PT+ + APG +T +T+ S PVT
Sbjct: 17 VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTT-TTVASGPVT 75
Query: 430 SVAPV*RLSKPSLCNNLLASNRPV 359
+ + S ++ A+ PV
Sbjct: 76 TTGSTDTTTPSSAPQDVKAALVPV 99
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 23.8 bits (49), Expect = 4.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 217 TISRYFGVLYLFLSWTTRRL 158
TI RYF + + FLS T +L
Sbjct: 141 TIERYFAICHPFLSHTMSKL 160
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.0 bits (47), Expect = 7.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 225 ITVQSVGTLECCICFYPGQRGVCEHSSQ 142
+ QSV L C C P C+ S+Q
Sbjct: 19 LLAQSVSALRCYQCASPSSWSDCQASAQ 46
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 23.0 bits (47), Expect = 7.4
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 565 PSTAPFMAPNTRAPVV-VRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 419
P A +A P+V V +P+S + G +S + + +P S+AP
Sbjct: 114 PRDASKIAARLIIPIVPVTVRPSSPKPNSRKGKISNANDKHVAPALSIAP 163
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 7.4
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -2
Query: 371 QQTSAVGSSIVSQTHLDTIAWEFM 300
++ SA+ + VSQ+ ++T WE +
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVL 193
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.6 bits (46), Expect = 9.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 481 APGPLSTGSTLYSSPVTSVAPV-*RLSKPSLCN 386
APGP ST+ T+VAP+ +L SL N
Sbjct: 558 APGPDGIPSTVLKRCQTTVAPILAKLFNASLAN 590
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 216 QSVGTLECCICFYPGQRGVCEHSSQ 142
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 127 VVREKLTTMLANASLSRIKTNTTLQSTD 210
V+RE L + + +KTN +STD
Sbjct: 1983 VMREALVNLTRESCYQIVKTNEVPESTD 2010
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.6 bits (46), Expect = 9.8
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 568 PPSTAPFMAPNTRAPVVVRAKPTSK*--HLNAPGPLSTGSTLYSSPVTS 428
PP+T + + A PT+ L P P +T +T+++ P T+
Sbjct: 214 PPTTTTTVWIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTTVWTDPTTT 262
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 99 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 209
KR+ V R GK++++ + V+ D+ + P+ R
Sbjct: 25 KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 22.6 bits (46), Expect = 9.8
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 467 VNWFNIIFITSDFSGTCVETVQAEPLQQSSCQQQTSAVGSSIVS 336
+N FN+ G C V P Q + ++AVGS+I S
Sbjct: 310 LNLFNMDVTKKCLIGECWVPVPDLPKVQKALSDGSAAVGSTIPS 353
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -3
Query: 589 IECGTFKPPSTAPFMAPNTRAPVVVRAKPTS 497
+ G PP+T A T AP PT+
Sbjct: 17 VTSGQIDPPTTTVAPATTTVAPTTTTVAPTT 47
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,462
Number of Sequences: 2352
Number of extensions: 13566
Number of successful extensions: 73
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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