Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A02
         (401 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.64 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   2.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 0.64
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 310 FDQESSDDALLHAFVTENTSINALHCLLA 224
           FD    + +L H+     T  NA HC LA
Sbjct: 793 FDWVQKEQSLAHSVGVFLTIFNAAHCYLA 821


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 64  HKVKPKENSTNSWRSLGI 117
           + +KPKE ++N W   G+
Sbjct: 148 YSIKPKERNSNHWVRSGL 165


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 64  HKVKPKENSTNSWRSLGI 117
           + +KPKE ++N W   G+
Sbjct: 104 YSIKPKERNSNHWVRSGL 121


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 116 YQYVKKPKKI 145
           YQ VKKPKKI
Sbjct: 292 YQEVKKPKKI 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,880
Number of Sequences: 336
Number of extensions: 1823
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)