Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_A02
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   0.78 
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    22   7.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   7.3  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    22   9.6  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 0.78
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +3

Query: 45  DDVCLTTQSQTKGE*YELLEVAWYTSMLRNLRRSRGVVSARVNYAVSSPRGP 200
           D  C  T S+ K        V W+TS++ +LRR     S     A  +P  P
Sbjct: 258 DKACDATMSRLKKT-CRWRGVYWWTSVIADLRRKSKAASRVAQRAYDTPEFP 308


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -1

Query: 371 PFCQTLCW 348
           P+C+T+CW
Sbjct: 267 PWCRTMCW 274


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 242 RVYGGVLCHKCVKQ 283
           ++Y GVL  KC+K+
Sbjct: 290 QIYMGVLTQKCIKE 303


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 331 DFHDLLFFDQESSDDALLHAFVTEN 257
           +FH  LF   +   D L + F TEN
Sbjct: 44  NFHAELFRTMDEVKDGLRYIFQTEN 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,020
Number of Sequences: 2352
Number of extensions: 7453
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)