Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P24
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.5  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   5.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.7  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 341 KLAFVIRIRGVNQVSPKVRKVLQL 412
           KL FV+R+ G+  +   +RK ++L
Sbjct: 359 KLWFVLRLYGIENLQAFIRKHVEL 382


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 557 RNRVCTPTLGHSSSWGSP 504
           ++ VC+P  GH  S  SP
Sbjct: 146 KSSVCSPGSGHQDSRTSP 163


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 557 RNRVCTPTLGHSSSWGSP 504
           ++ VC+P  GH  S  SP
Sbjct: 146 KSSVCSPGSGHQDSRTSP 163


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 457  VETNEHAVVD 428
            +ETNEH ++D
Sbjct: 1048 IETNEHEIID 1057


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 114 WQLLTVLFTLHRFF 73
           +QLL ++FT+ +FF
Sbjct: 3   FQLLQIMFTIGKFF 16


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 457 VETNEHAVVD 428
           +ETNEH ++D
Sbjct: 329 IETNEHEIID 338


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 557 RNRVCTPTLGHSSSWGSP 504
           ++ VC+P  GH  S  SP
Sbjct: 146 KSSVCSPGSGHQDSRTSP 163


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 316 ATVTSLSCQSDFITLLDAVFFDILFGSL 233
           A +TS SC++  +   D ++F + F S+
Sbjct: 203 AFITSQSCENATLYSGDEMYFRVAFPSV 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,320
Number of Sequences: 336
Number of extensions: 2624
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)