Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P22
         (404 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   0.86 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   0.86 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   8.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 256 LLVSTFVCDTTFVKYKILMKEIYTL 330
           +L++  VC+ T ++YK   K +Y +
Sbjct: 293 ILITVTVCELTILEYKRTKKLLYRI 317


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 256 LLVSTFVCDTTFVKYKILMKEIYTL 330
           +L++  VC+ T ++YK   K +Y +
Sbjct: 118 ILITVTVCELTILEYKRTKKLLYRI 142


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 272 NVLTSKITKT*IHLRPRPRPGHS 204
           +V T   T     L P P PGHS
Sbjct: 309 SVATPTPTSVMTELYPSPVPGHS 331


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 224 RPRPGHSNKY 195
           RPRPG   KY
Sbjct: 108 RPRPGGGTKY 117


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/32 (21%), Positives = 17/32 (53%)
 Frame = +1

Query: 238 IYVFVILLVSTFVCDTTFVKYKILMKEIYTLY 333
           +YV + +L + F+      +  ++  + YTL+
Sbjct: 141 VYVILYILATVFLAYVWICEMGVVTLQAYTLH 172


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/32 (21%), Positives = 17/32 (53%)
 Frame = +1

Query: 238 IYVFVILLVSTFVCDTTFVKYKILMKEIYTLY 333
           +YV + +L + F+      +  ++  + YTL+
Sbjct: 141 VYVILYILATVFLAYVWICEMGVVTLQAYTLH 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,630
Number of Sequences: 336
Number of extensions: 1529
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)