Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P22
         (404 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   2.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   4.0  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   4.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   9.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   9.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   9.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   9.3  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 317 SFIKILYFTKVVSQTNVLTSKITKT*IHLRPRP 219
           +F+ IL +  V S  NV++ K  K    L+P P
Sbjct: 77  TFVTILRYDGVPSTLNVISGKTGKGGRLLKPYP 109


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 317 SFIKILYFTKVVSQTNVLTSK 255
           +F+ I+ F  V S  NV+T+K
Sbjct: 74  TFVIIMKFNGVPSSLNVITNK 94


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 317 SFIKILYFTKVVSQTNVLTSKITKT*IHLRPRP 219
           +F+ ++ +  V S  NV++ KI      L+P P
Sbjct: 80  TFLAVIRYDGVPSSLNVISEKIGNGGCLLQPYP 112


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 247 FVILLVSTFVCDTTFVKYKI 306
           F  L  STFV D  + KY I
Sbjct: 220 FQRLTSSTFVYDPRYTKYTI 239


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 314 FIKILYFTKVVSQTNVLTSKITKT*IHLRPRP 219
           F+ +L +  V S  NV++ K+      L+P P
Sbjct: 77  FVTMLRYNGVPSSLNVISKKVGDGGPLLQPYP 108


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = +2

Query: 74  ISVAAAARVILNILIDLVLGIIFCFEFNFIL 166
           +S+     +++  ++D+VLG +  + F F +
Sbjct: 56  VSLKNEVNIMMKNVVDIVLGGLTYWAFGFAM 86


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 314 FIKILYFTKVVSQTNVLTSKITKT*IHLRPRP 219
           F+ +L +  V S  NV++ K+      L+P P
Sbjct: 77  FVTMLRYNGVPSSLNVISKKVGDGGPLLQPYP 108


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 314 FIKILYFTKVVSQTNVLTSKITKT*IHLRPRP 219
           F+ +L +  V S  NV++ K+      L+P P
Sbjct: 77  FVTMLRYNGVPSSLNVISKKVGDGGPLLQPYP 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,311
Number of Sequences: 438
Number of extensions: 1611
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)