Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P21
         (392 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.20 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   0.82 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   4.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.8  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.20
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 239 DSFTYNGEFSV*CTGAWRDLHWWLHGPSRCST 334
           DS T N  + V  TG+W D+   +H  +  ST
Sbjct: 182 DSVTSNAWWDVHSTGSWLDMSGGMHQMANYST 213


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 364 KPTTKPRNSQSRAPRGPMQPP 302
           KP+TKP N      + P  PP
Sbjct: 180 KPSTKPTNKPVVVTKPPQAPP 200


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 112 NAILWHPSLQDSYSLQAGGSLLMQPQSTRTT 204
           N+ +W P+  DS++L+   S     Q   +T
Sbjct: 215 NSSIWSPASIDSFTLEQHRSWCSSSQPVLST 245


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory
          receptor candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 50 MRAINLYFYKCYFT 9
          M  +NL+F + YFT
Sbjct: 10 MMVLNLFFSQMYFT 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,990
Number of Sequences: 336
Number of extensions: 2391
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)