Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P21
         (392 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g36980.1 68414.m04610 expressed protein                             35   0.023
At1g80530.1 68414.m09439 nodulin family protein similar to nodul...    29   1.1  
At2g20875.1 68415.m02460 hypothetical protein                          28   2.0  
At4g37530.1 68417.m05310 peroxidase, putative similar to peroxid...    28   2.6  
At5g01740.1 68418.m00092 expressed protein wound-inducible prote...    27   6.0  
At4g22756.1 68417.m03285 sterol desaturase family protein simila...    27   6.0  
At5g44400.1 68418.m05436 FAD-binding domain-containing protein s...    26   7.9  
At4g12110.1 68417.m01923 sterol desaturase family protein simila...    26   7.9  
At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote...    26   7.9  
At1g61490.1 68414.m06928 S-locus protein kinase, putative simila...    26   7.9  
At1g61480.1 68414.m06927 S-locus protein kinase, putative simila...    26   7.9  
At1g33811.1 68414.m04180 GDSL-motif lipase/hydrolase family prot...    26   7.9  

>At1g36980.1 68414.m04610 expressed protein
          Length = 135

 Score = 34.7 bits (76), Expect = 0.023
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = +3

Query: 177 DAASVYPNNLPNAAHVCGVMGTLSLIMVNSVSNAQVRGETYTGGCMGPRGARLWLFLGFV 356
           DA       +P   ++ G+  +L  +M N V    +    Y  G       +LWLF+ +V
Sbjct: 28  DAVVCSSIQVPFVHYLPGIFASLGALMFNCVRKEDIDYSPYDEG---EWRLKLWLFIAYV 84

Query: 357 VGFASLIAS 383
           V F SL AS
Sbjct: 85  VAFVSLAAS 93


>At1g80530.1 68414.m09439 nodulin family protein similar to
           nodulin-like protein [Arabidopsis thaliana] GI:3329368,
           nodule-specific protein Nlj70 [Lotus japonicus]
           GI:3329366
          Length = 561

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 76  ICLAVCGLKTAINAILWHPSLQDSYSLQAGGSLLMQPQST 195
           +   VCGL T ++ IL         +L A GS  +QPQST
Sbjct: 520 VLAGVCGLGTLLSIILTVRIRPVYQALYASGSFRLQPQST 559


>At2g20875.1 68415.m02460 hypothetical protein
          Length = 104

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 177 DAASVYPNNLPNAAHVCGVMGTLSLIMVNSVSNAQVRGET 296
           D   V  + LP+ +H CG      L+MV+ V  +    ET
Sbjct: 48  DTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAET 87


>At4g37530.1 68417.m05310 peroxidase, putative similar to peroxidase
           [Arabidopsis thaliana] gi|1402906|emb|CAA66958;
           identical to Pfam profile PF00141: Peroxidase; identical
           to cDNA peroxidase ATP37 GI:18874553
          Length = 329

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 243 LSLIMVNSVSNAQVRGETYTGGC 311
           LSL +  ++S+AQ+RG+ Y G C
Sbjct: 14  LSLFLAINLSSAQLRGDFYAGTC 36


>At5g01740.1 68418.m00092 expressed protein wound-inducible protein
           wun1 protein - Solanum tuberosum, PIR:JQ0398
          Length = 162

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 293 DLHWWLHGPSRC 328
           D+ WW HGP  C
Sbjct: 44  DVEWWFHGPHDC 55


>At4g22756.1 68417.m03285 sterol desaturase family protein similar
           to sterol 4-alpha-methyl-oxidase GI:16973471 from
           [Arabidopsis thaliana]; contains Pfam profile PF01598:
           Sterol desaturase
          Length = 299

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 78  YSYSRNNSFYACYKSLFLQMLFHLVP 1
           YS ++++ +  C+  LFL ++F LVP
Sbjct: 28  YSATKSDYYLYCHNILFLFLIFSLVP 53


>At5g44400.1 68418.m05436 FAD-binding domain-containing protein
           similar to SP|P30986 reticuline oxidase precursor
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase) [Eschscholzia
           californica]; contains PF01565 FAD binding domain
          Length = 537

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 240 SPLHHKHGQHWASCSGRLRLH 178
           SP+H  H Q    CS +LR+H
Sbjct: 89  SPIHESHVQASIICSKKLRMH 109


>At4g12110.1 68417.m01923 sterol desaturase family protein similar
           to sterol 4-alpha-methyl-oxidase GI:16973471 from
           [Arabidopsis thaliana]; contains Pfam profile PF01598:
           Sterol desaturase
          Length = 298

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 78  YSYSRNNSFYACYKSLFLQMLFHLVP 1
           YS ++++ +  C+  LFL ++F LVP
Sbjct: 28  YSATKSDYYLYCHNILFLFLVFSLVP 53


>At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein
           kinase, putative receptor-like protein kinase (RKL1),
           Arabidopsis thaliana, EMBL:AF084034
          Length = 660

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 336 WLFLGFVVGFASLI 377
           WL LGF +G ASLI
Sbjct: 291 WLVLGFTIGLASLI 304


>At1g61490.1 68414.m06928 S-locus protein kinase, putative similar
           to KI domain interacting kinase 1 [Zea mays]
           gi|2735017|gb|AAB93834; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 804

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 79  CLAVCGLKTAINAILWHPSLQDSYSLQAGGSLL 177
           CLA   +   I  ++W+ +L D+    AGG +L
Sbjct: 378 CLAFAYIH-GIGCLIWNQNLMDAVQFSAGGEIL 409


>At1g61480.1 68414.m06927 S-locus protein kinase, putative similar
           to receptor protein kinase (IRK1) GI:836953 from
           [Ipomoea trifida]; contains S-locus glycoprotein family
           domain, Pfam:PF00954
          Length = 809

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 79  CLAVCGLKTAINAILWHPSLQDSYSLQAGGSLL 177
           CLA   +   I  ++W+  L D+    AGG +L
Sbjct: 378 CLAFAYIN-GIGCLMWNQDLMDAVQFSAGGEIL 409


>At1g33811.1 68414.m04180 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382, EXL2 GI:15054384 from [Arabidopsis
           thaliana]; contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase
          Length = 370

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 182 SLSLPEQLAQCCPCLWCNGDSFTYNG 259
           ++S P+Q AQ  PCL+  GDS   NG
Sbjct: 22  TVSQPQQQAQV-PCLFIFGDSLVDNG 46


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,189,582
Number of Sequences: 28952
Number of extensions: 188873
Number of successful extensions: 561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)