Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P20
(388 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P27635 Cluster: 60S ribosomal protein L10; n=53; Fungi/... 243 8e-64
UniRef50_Q96L21 Cluster: 60S ribosomal protein L10-like; n=168; ... 236 1e-61
UniRef50_Q9M5M7 Cluster: 60S ribosomal protein L10; n=52; Eukary... 215 2e-55
UniRef50_UPI00015B4E4A Cluster: PREDICTED: similar to ribosomal ... 184 5e-46
UniRef50_Q5B047 Cluster: Putative uncharacterized protein; n=1; ... 170 9e-42
UniRef50_UPI0000499E88 Cluster: 60S ribosomal protein L10; n=1; ... 147 6e-35
UniRef50_Q3LW95 Cluster: Ribosomal protein L10e; n=1; Bigelowiel... 147 6e-35
UniRef50_Q6LAD9 Cluster: LAMININ RECEPTOR; n=4; Eukaryota|Rep: L... 132 2e-30
UniRef50_Q8ZSV4 Cluster: 50S ribosomal protein L10e; n=9; Thermo... 102 3e-21
UniRef50_Q6LXR0 Cluster: 50S ribosomal protein L10e; n=3; Methan... 99 3e-20
UniRef50_Q2FLD3 Cluster: Ribosomal protein L10.e; n=3; Methanomi... 95 4e-19
UniRef50_A7I691 Cluster: Ribosomal protein L10E; n=5; Archaea|Re... 95 4e-19
UniRef50_Q9UWP5 Cluster: 50S ribosomal protein L10e; n=4; Thermo... 94 1e-18
UniRef50_P60617 Cluster: 50S ribosomal protein L10e; n=9; Euryar... 91 5e-18
UniRef50_P58299 Cluster: 50S ribosomal protein L10e; n=9; Archae... 91 9e-18
UniRef50_Q96YA4 Cluster: 50S ribosomal protein L10e; n=4; Sulfol... 91 9e-18
UniRef50_O27191 Cluster: 50S ribosomal protein L10e; n=6; Euryar... 84 1e-15
UniRef50_A0RWP6 Cluster: Ribosomal protein L16/L10E; n=2; Thermo... 83 1e-15
UniRef50_UPI00015BAE8F Cluster: LSU ribosomal protein L10AE; n=1... 80 1e-14
UniRef50_UPI00005A4DCA Cluster: PREDICTED: similar to ribosomal ... 80 2e-14
UniRef50_Q74M84 Cluster: 50S ribosomal protein L10e; n=1; Nanoar... 61 6e-09
UniRef50_Q01C83 Cluster: RL10_CAEEL 60S ribosomal protein L10; n... 60 2e-08
UniRef50_Q01C82 Cluster: 3'-5' exonuclease, putative; n=3; Ostre... 55 4e-07
UniRef50_A6GP53 Cluster: DNA repair protein RecO; n=1; Limnobact... 32 3.3
UniRef50_A1D6S0 Cluster: Hsp40 co-chaperone Jid1, putative; n=6;... 32 3.3
UniRef50_Q4KCD4 Cluster: Nonribosomal peptide synthase; n=1; Pse... 32 4.4
UniRef50_Q1YM22 Cluster: Sensor protein; n=4; Rhizobiales|Rep: S... 32 4.4
UniRef50_A4A044 Cluster: Methionine aminopeptidase; n=3; Plancto... 31 5.8
UniRef50_UPI00015B8F5F Cluster: UPI00015B8F5F related cluster; n... 31 7.7
UniRef50_Q74AA6 Cluster: DNA-binding response regulator KdpE; n=... 31 7.7
UniRef50_Q7QRS8 Cluster: GLP_260_5730_5329; n=1; Giardia lamblia... 31 7.7
>UniRef50_P27635 Cluster: 60S ribosomal protein L10; n=53;
Fungi/Metazoa group|Rep: 60S ribosomal protein L10 -
Homo sapiens (Human)
Length = 214
Score = 243 bits (595), Expect = 8e-64
Identities = 107/120 (89%), Positives = 114/120 (95%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYRYCKNKPYPKSRFCRGVPD KIRIFDLG+K+A VD+FPLC H+VSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQL 60
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
SSEALEA RIC NKY+VK+CGKD FHIR+RLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
>UniRef50_Q96L21 Cluster: 60S ribosomal protein L10-like; n=168;
Eukaryota|Rep: 60S ribosomal protein L10-like - Homo
sapiens (Human)
Length = 214
Score = 236 bits (577), Expect = 1e-61
Identities = 104/120 (86%), Positives = 113/120 (94%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYRYCKNKPYPKSRFCRGVPD KIRIFDLG+K+A VD+FPL H+VSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQL 60
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
SSEALEA RIC NKY+VK+CG+D FH+R+RLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
>UniRef50_Q9M5M7 Cluster: 60S ribosomal protein L10; n=52;
Eukaryota|Rep: 60S ribosomal protein L10 - Euphorbia
esula (Leafy spurge)
Length = 220
Score = 215 bits (525), Expect = 2e-55
Identities = 95/120 (79%), Positives = 105/120 (87%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYR KNKPYPKSRFCRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
SSEALEA RI CNKY+ K GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
>UniRef50_UPI00015B4E4A Cluster: PREDICTED: similar to ribosomal
protein L10e isoform 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ribosomal protein L10e isoform 2 -
Nasonia vitripennis
Length = 194
Score = 184 bits (448), Expect = 5e-46
Identities = 92/120 (76%), Positives = 95/120 (79%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKK+A+V+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKASVEDFPLCVHLVSDEYEQL 60
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
SSEALEAGRIC NK INKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAGRICANK------------------------INKMLSCAGADRLQTGMRGAFG 96
>UniRef50_Q5B047 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 250
Score = 170 bits (413), Expect = 9e-42
Identities = 92/149 (61%), Positives = 106/149 (71%), Gaps = 29/149 (19%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RRPARCYRYCKNKPYPKSRF RGVPDPKIRIFDLG+K+A VDDFPLCVHLVS+EYEQL
Sbjct: 1 MARRPARCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKKANVDDFPLCVHLVSNEYEQL 60
Query: 209 SSEALEAGRICCNKYLV-----------KNCGKDQFHIRMRL---------HPFHV-IRI 325
SSEALEA RIC NKY++ K+ +++ + M FH+ +R+
Sbjct: 61 SSEALEAARICANKYVLTATEPDFRDEKKDMRREETILTMDYRYLVKIAGKEGFHLRVRV 120
Query: 326 N--------KMLSCAGADRLQTGMRGAFG 388
+ KMLSCAGADRLQTGMRGAFG
Sbjct: 121 HPFHVIRINKMLSCAGADRLQTGMRGAFG 149
>UniRef50_UPI0000499E88 Cluster: 60S ribosomal protein L10; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L10 - Entamoeba histolytica HM-1:IMSS
Length = 190
Score = 147 bits (357), Expect = 6e-35
Identities = 69/120 (57%), Positives = 84/120 (70%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRP RCYR + PYPKS++CRGVPDP+I++FD+G + A DDFP
Sbjct: 1 MGRRPGRCYRLVRGHPYPKSKYCRGVPDPRIKLFDIGNRSAPCDDFP------------- 47
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
RI NK ++K GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGA+G
Sbjct: 48 -------SRISINKNMLKYAGKDGFHVRIRIHPFHVLRINKMLSCAGADRLQTGMRGAWG 100
>UniRef50_Q3LW95 Cluster: Ribosomal protein L10e; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10e - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 193
Score = 147 bits (357), Expect = 6e-35
Identities = 63/120 (52%), Positives = 91/120 (75%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRP +CYR+ KNKPYPKS++C+ P KI++FD+G KRA + +P C++LV+ + +
Sbjct: 1 MGRRPFKCYRFIKNKPYPKSKYCKKCPVSKIKMFDIGDKRAKKNIYPCCINLVNLQPINI 60
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
SSE LE+ RI N+ L K+ +FH+++++HP H++R NKMLS AGADR+QTGMR +FG
Sbjct: 61 SSECLESVRIVMNRNLTKSIKNKKFHLKIKMHPLHILRNNKMLSRAGADRVQTGMRNSFG 120
>UniRef50_Q6LAD9 Cluster: LAMININ RECEPTOR; n=4; Eukaryota|Rep:
LAMININ RECEPTOR - Arabidopsis thaliana (Mouse-ear
cress)
Length = 76
Score = 132 bits (319), Expect = 2e-30
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYR K KPYPKSR+CRGVPDPKIRI+D+G KR VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 209 SSEALEAGRICCNKYL 256
SSEALEA RI CNKY+
Sbjct: 61 SSEALEAARIACNKYM 76
>UniRef50_Q8ZSV4 Cluster: 50S ribosomal protein L10e; n=9;
Thermoprotei|Rep: 50S ribosomal protein L10e -
Pyrobaculum aerophilum
Length = 180
Score = 102 bits (244), Expect = 3e-21
Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Frame = +2
Query: 38 RPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDD-FPLCVHLVSDEYEQLSS 214
RPARCY+ K PY + + G P +I FD+G A F + LV +E Q+
Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARTAFTMTAKLVVEERGQIRM 63
Query: 215 EALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
+ALEA R +KYL K G +++R+ + P HV+R N+ML+ AGADRLQ GMR AFG
Sbjct: 64 QALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFG 121
>UniRef50_Q6LXR0 Cluster: 50S ribosomal protein L10e; n=3;
Methanococcus maripaludis|Rep: 50S ribosomal protein
L10e - Methanococcus maripaludis
Length = 173
Score = 98.7 bits (235), Expect = 3e-20
Identities = 48/120 (40%), Positives = 71/120 (59%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RPARCYR + + Y + + R VP PK+ + +G A +FP+ V LVS +
Sbjct: 1 MALRPARCYRTIERRSYTRKEYVRAVPQPKVVHYVMGNPSA---EFPVQVQLVSKSDILI 57
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
ALE+ RI NKY++ CG+ + +R++P ++R NKM + AGADR+ GMR +FG
Sbjct: 58 RHNALESSRIAGNKYILSECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFG 117
>UniRef50_Q2FLD3 Cluster: Ribosomal protein L10.e; n=3;
Methanomicrobia|Rep: Ribosomal protein L10.e -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 170
Score = 95.1 bits (226), Expect = 4e-19
Identities = 49/120 (40%), Positives = 69/120 (57%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M R+P YR K Y + + G+P K+ FD+G +FP+ V LV DE Q+
Sbjct: 1 MVRKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMGN---LTSEFPMEVSLVVDESCQI 57
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
ALEA R+ N+ L K G+ +H+++R +P HV+R NK + AGADR+ GMR AFG
Sbjct: 58 RHSALEAARMSINRKLNKELGRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFG 117
>UniRef50_A7I691 Cluster: Ribosomal protein L10E; n=5; Archaea|Rep:
Ribosomal protein L10E - Methanoregula boonei (strain
6A8)
Length = 248
Score = 95.1 bits (226), Expect = 4e-19
Identities = 49/120 (40%), Positives = 70/120 (58%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M R+P + YR K Y + + GVP KI F++G +FP + L+ +E Q+
Sbjct: 1 MVRKPGKMYRNLAKKAYTRREYMGGVPGNKIVQFEMGNLS---QEFPTEIDLIVEETCQI 57
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
ALEA RI N+ L+K+ G+ FH ++R+ P HV+R NK + AGADR+ GMR AFG
Sbjct: 58 RHSALEAARISVNRKLLKDVGRTNFHFKVRVFPHHVLRENKQATGAGADRVSEGMRLAFG 117
>UniRef50_Q9UWP5 Cluster: 50S ribosomal protein L10e; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L10e -
Pyrococcus furiosus
Length = 181
Score = 93.9 bits (223), Expect = 1e-18
Identities = 50/120 (41%), Positives = 65/120 (54%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RPA+ RY Y + + RG P PKI IFD+G DF V L + E Q+
Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAG---DFEFEVSLHTAEPVQI 57
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
ALEA R N+YL KN G+ +H ++R++PF V+R N M + ADR GMR FG
Sbjct: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
>UniRef50_P60617 Cluster: 50S ribosomal protein L10e; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L10e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 91.5 bits (217), Expect = 5e-18
Identities = 44/121 (36%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M +PA YR Y + + G+P KI +G+K+ DD+P+ + L+ +E QL
Sbjct: 1 MSDKPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQL 60
Query: 209 SSEALEAGRICCNKYLVKNCGKD-QFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 385
+LEA R+ N++L+K G++ + + +R P V+R NK + AGADR+ GMR AF
Sbjct: 61 RHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAF 120
Query: 386 G 388
G
Sbjct: 121 G 121
>UniRef50_P58299 Cluster: 50S ribosomal protein L10e; n=9;
Archaea|Rep: 50S ribosomal protein L10e - Thermoplasma
volcanium
Length = 176
Score = 90.6 bits (215), Expect = 9e-18
Identities = 47/120 (39%), Positives = 70/120 (58%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M +PAR Y Y + F GVP PKI F G ++ DFP+ + L++ E Q+
Sbjct: 1 MVTKPARMYTRITGPAYTRKEFMGGVPYPKITTFVQGNQKR---DFPIEMQLIAMESCQV 57
Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
ALEA R+ N+ + + G D F++++ +P HV+R +KM + AGADR+ +GMR AFG
Sbjct: 58 RHTALEAARVSVNRRMTEAAGLDNFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFG 117
>UniRef50_Q96YA4 Cluster: 50S ribosomal protein L10e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L10e -
Sulfolobus tokodaii
Length = 176
Score = 90.6 bits (215), Expect = 9e-18
Identities = 53/121 (43%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RP RCYR+ Y + + GVP PKI F +G D + L LV+ E Q+
Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGVPMPKITKFTMGNVNGNYD-YEL--RLVALEKGQI 57
Query: 209 SSEALEAGRICCNKYLVKNCGKDQ-FHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 385
ALEA R+ K L G DQ F + + +P HVIR NKM++ AGADRLQ GMR +F
Sbjct: 58 RHNALEAARVLALKQLTNKTGSDQNFALIVLKYPHHVIRENKMMAFAGADRLQDGMRLSF 117
Query: 386 G 388
G
Sbjct: 118 G 118
>UniRef50_O27191 Cluster: 50S ribosomal protein L10e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L10e -
Methanobacterium thermoautotrophicum
Length = 160
Score = 83.8 bits (198), Expect = 1e-15
Identities = 38/106 (35%), Positives = 65/106 (61%)
Frame = +2
Query: 71 KPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNK 250
+ Y + + + +P KI +D+G A +FP+ + + Q++ ALEA RI N+
Sbjct: 3 RAYTRREYIKKIPGSKIVQYDMGNLSA---EFPISLSVAVKAPTQITHNALEAARIASNR 59
Query: 251 YLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
Y+ + G+ +H+++R++P H++R N M + AGADR+Q GMR AFG
Sbjct: 60 YMQRRAGRMGYHLKIRVYPHHIVRENPMATGAGADRVQDGMRKAFG 105
>UniRef50_A0RWP6 Cluster: Ribosomal protein L16/L10E; n=2;
Thermoprotei|Rep: Ribosomal protein L16/L10E -
Cenarchaeum symbiosum
Length = 170
Score = 83.4 bits (197), Expect = 1e-15
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = +2
Query: 53 YRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAG 232
YR +PY + + +G P KI F G D+ CV L+ +E Q+ A+E+
Sbjct: 6 YRRSNGQPYTRKEYIKGKPQSKISKFQNGSP----GDYDYCVQLLINEKVQIRHMAIESA 61
Query: 233 RICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
R+ NK + K G+ + R+R++P ++R NKM++ AGADRLQ GMR A+G
Sbjct: 62 RLAANKTIEKATGESGYFSRLRIYPHVLLRENKMIATAGADRLQEGMRRAWG 113
>UniRef50_UPI00015BAE8F Cluster: LSU ribosomal protein L10AE; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10AE - Ignicoccus hospitalis KIN4/I
Length = 173
Score = 80.2 bits (189), Expect = 1e-14
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Frame = +2
Query: 38 RPARCY--RYCKN---KPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 202
+PARC+ R+ K PY + + G+P PK+ + +G D + V LV+ E
Sbjct: 3 KPARCFTKRHAKGFSGPPYTRHEYIHGIPQPKVVKWVMGNPHVDAD---VEVRLVALERA 59
Query: 203 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 382
Q+ ALEA R+ +K L + G+ + ++ +P HV+R +K ++ AGADRLQ GMR A
Sbjct: 60 QVRHNALEAARVMVHKNLSSDIGESNYVFIIKRYPHHVLREHKFMAFAGADRLQEGMRHA 119
Query: 383 FG 388
FG
Sbjct: 120 FG 121
>UniRef50_UPI00005A4DCA Cluster: PREDICTED: similar to ribosomal
protein L10; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L10 - Canis familiaris
Length = 171
Score = 79.8 bits (188), Expect = 2e-14
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKD 277
RG PD KI IF++G+K+A VD+FP C +VSD Y Q SEA EA IC +KY+VK+CGKD
Sbjct: 7 RGAPDAKICIFEVGQKKAKVDEFPPCGQIVSDGYVQPFSEAPEAAHICSSKYMVKSCGKD 66
>UniRef50_Q74M84 Cluster: 50S ribosomal protein L10e; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L10e -
Nanoarchaeum equitans
Length = 186
Score = 61.3 bits (142), Expect = 6e-09
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = +2
Query: 50 CYR-----YCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSS 214
CYR Y + + G +R+F +G+ ++ LV+ E Q+
Sbjct: 9 CYRKLEVPYTRVSRSKNKNYIPGAKPTMVRLFHMGELTRNPSEWQYEASLVAKENHQIRD 68
Query: 215 EALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKML-SCAGADRLQTGMRGAFG 388
A+EA R+ NKYL GK ++ +R +P H+ R ++ AGADR+ GMR +FG
Sbjct: 69 NAIEAIRVMVNKYLESTLGKKRYLFIIRKYPHHIYREKPVVGGYAGADRISQGMRLSFG 127
>UniRef50_Q01C83 Cluster: RL10_CAEEL 60S ribosomal protein L10; n=1;
Ostreococcus tauri|Rep: RL10_CAEEL 60S ribosomal protein
L10 - Ostreococcus tauri
Length = 92
Score = 59.7 bits (138), Expect = 2e-08
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATV 157
M RRPA+CYR KNKPYPKSR+CRGVP R G RA +
Sbjct: 1 MARRPAKCYRVIKNKPYPKSRYCRGVPGACERATTRGSGRARI 43
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2
Query: 95 CRGVPDPKIRIFDLGKKRATVDDFPLCVHLV 187
C DPKIRI+D G K+ D FP CVHLV
Sbjct: 61 CDPFTDPKIRIYDAGMKKYNCDAFPACVHLV 91
>UniRef50_Q01C82 Cluster: 3'-5' exonuclease, putative; n=3;
Ostreococcus|Rep: 3'-5' exonuclease, putative -
Ostreococcus tauri
Length = 1013
Score = 55.2 bits (127), Expect = 4e-07
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = -1
Query: 382 RTTHPSLEPISSSARQHFIDADDMEGV*SHPDVELIFTAVLYEVLVATDTACFQRLRTQL 203
RTTH L+ I ARQH +DA ++E V +H VE T++ + VLV +TA F RL L
Sbjct: 944 RTTHTRLQAIRPGARQHLVDAQNVERVQAHAKVEAFLTSLGHHVLVRRNTAGFHRLGADL 1003
Query: 202 LVL 194
+L
Sbjct: 1004 FLL 1006
>UniRef50_A6GP53 Cluster: DNA repair protein RecO; n=1; Limnobacter
sp. MED105|Rep: DNA repair protein RecO - Limnobacter
sp. MED105
Length = 244
Score = 32.3 bits (70), Expect = 3.3
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 245 CNRYGLLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQA 105
C +G LP A R H L A +V PLS+ F + +L QA
Sbjct: 30 CKEHGRLPVVAKGAKRPHSGLRAVLVSFQPLSVRFTGKSEVKTLMQA 76
>UniRef50_A1D6S0 Cluster: Hsp40 co-chaperone Jid1, putative; n=6;
Trichocomaceae|Rep: Hsp40 co-chaperone Jid1, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 311
Score = 32.3 bits (70), Expect = 3.3
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +2
Query: 74 PYPKSRFCRGVPDPKIRIFDLGK---KRATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 244
PY + RG P K R +DL K +D PLC HL + Q + A I
Sbjct: 65 PYDVFKQDRGAPYSKSRFYDLVKIYHPDRPCNDHPLCRHLTPEVRLQRYHLVVAAHEILS 124
Query: 245 NKYLVKNCGKDQFHIRMRLHP 307
+ K DQF LHP
Sbjct: 125 DP--TKRAAYDQFGTGWSLHP 143
>UniRef50_Q4KCD4 Cluster: Nonribosomal peptide synthase; n=1;
Pseudomonas fluorescens Pf-5|Rep: Nonribosomal peptide
synthase - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 4163
Score = 31.9 bits (69), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 263 NCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
+C ++ +I+ + PF+V + NK AG DR + G AFG
Sbjct: 2025 HCEQENHYIQWQQSPFYVNKANKPWPQAGRDRERLGAVSAFG 2066
>UniRef50_Q1YM22 Cluster: Sensor protein; n=4; Rhizobiales|Rep: Sensor
protein - Aurantimonas sp. SI85-9A1
Length = 1067
Score = 31.9 bits (69), Expect = 4.4
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 107 PDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAG 232
P P + + G+ +DD PL LV D E+L ALEAG
Sbjct: 936 PAPAVAPTETGRTVLVIDDEPLVRMLVVDVLEELGYTALEAG 977
>UniRef50_A4A044 Cluster: Methionine aminopeptidase; n=3;
Planctomycetaceae|Rep: Methionine aminopeptidase -
Blastopirellula marina DSM 3645
Length = 265
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 186 TKCTHSGKSSTVALFLPKSKIRIFGSGTPRQNRDLGYGLFLQYR*HLAGRR 34
T+C + +A P+ + I G + + GYG+ +Y H GRR
Sbjct: 128 TQCAFDAMHAAIAAITPECCVAIIGRAVVAEAKKHGYGVVEEYVGHALGRR 178
>UniRef50_UPI00015B8F5F Cluster: UPI00015B8F5F related cluster; n=1;
unknown|Rep: UPI00015B8F5F UniRef100 entry - unknown
Length = 1052
Score = 31.1 bits (67), Expect = 7.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3
Query: 278 DLYRSSLRGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLSLSFCP 135
DL SL+G NR+ L + +AA H T A IVG+ S P
Sbjct: 323 DLGHPSLQGAVANRHDALDGGKPAAAHPHGTAIAGIVGARAQLASAAP 370
>UniRef50_Q74AA6 Cluster: DNA-binding response regulator KdpE; n=8;
Bacteria|Rep: DNA-binding response regulator KdpE -
Geobacter sulfurreducens
Length = 234
Score = 31.1 bits (67), Expect = 7.7
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 RFCRGVPDPKIRI----FDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYL 256
R R P+P RI DL ++R TVD V L EYE L A+ AG++ + +
Sbjct: 127 RSIRQAPEPICRIGGLEVDLPRRRVTVDGVE--VQLTPTEYELLRLLAVHAGKVLTHSQI 184
Query: 257 VKNCGKDQFHIRMRLHPFHVIRIN 328
++ H+ HV+R+N
Sbjct: 185 LRQIW-GVAHVEQP----HVLRVN 203
>UniRef50_Q7QRS8 Cluster: GLP_260_5730_5329; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_260_5730_5329 - Giardia lamblia ATCC
50803
Length = 133
Score = 31.1 bits (67), Expect = 7.7
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 TRVALWRT--QWGADQRXXXXXXXXXXXXXXGFVGVCLTQRSVFSTWAKRERQWMTSHYA 176
T + +++T +W ADQ LTQ+S T R+ TS A
Sbjct: 28 TFIRVYKTPPRWDADQHVATAIRRTSRTPSRASAVGFLTQKSDTLTSETAGRRLTTSRTA 87
Query: 177 CT*CLMSTSS*VLRRWKQAVSVATSTS*RTAVKISSTS 290
T S + W++ V ATSTS R KI STS
Sbjct: 88 STFFQERRSRSPRKLWRRVVLPATSTSQRRQGKIRSTS 125
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,815,744
Number of Sequences: 1657284
Number of extensions: 8597916
Number of successful extensions: 22030
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 21498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22014
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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