Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P20
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    24   0.46 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   0.60 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   2.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   2.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   2.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   2.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   2.4  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   2.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.3  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    20   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   7.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   7.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   7.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   7.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   7.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          20   9.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   9.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           20   9.8  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 24.2 bits (50), Expect = 0.46
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 93  FVGVCLTQRSVFSTWAKR 146
           FVGVC  Q +  + W KR
Sbjct: 13  FVGVCTAQLNFSTDWGKR 30


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 197 THQTLSARIVGSHPLSLS 144
           +H+ LSA +   HPLSLS
Sbjct: 323 SHEELSAMVNRCHPLSLS 340


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 VCLTQRSVFSTWAKRERQWMTSH 170
           +CLT+R +   +  R  +W   H
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEH 279


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 VCLTQRSVFSTWAKRERQWMTSH 170
           +CLT+R +   +  R  +W   H
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEH 279


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 VCLTQRSVFSTWAKRERQWMTSH 170
           +CLT+R +   +  R  +W   H
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEH 279


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 VCLTQRSVFSTWAKRERQWMTSH 170
           +CLT+R +   +  R  +W   H
Sbjct: 213 LCLTERQIKIWFQNRRMKWKKEH 235


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 VCLTQRSVFSTWAKRERQWMTSH 170
           +CLT+R +   +  R  +W   H
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEH 279


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 VCLTQRSVFSTWAKRERQWMTSH 170
           +CLT+R +   +  R  +W   H
Sbjct: 45  LCLTERQIKIWFQNRRMKWKKEH 67


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 VCLTQRSVFSTWAKRERQWMTSH 170
           +CLT+R +   +  R  +W   H
Sbjct: 257 LCLTERQIKIWFQNRRMKWKKEH 279


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 141 KRERQWMTSHYACT*C 188
           ++E QW +S   CT C
Sbjct: 681 RQEAQWTSSDNPCTTC 696


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 96  VGVCLTQRSVFSTWAKR 146
           VG+C  Q +    W KR
Sbjct: 14  VGLCAAQLNFTPNWGKR 30


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 56  RYCKNKPYPKSRFCRGVP 109
           ++   K +PKS+   GVP
Sbjct: 401 KFWTKKGFPKSKIVLGVP 418


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 305 PFHVIRINKMLSCAG 349
           P H +R+N ++S +G
Sbjct: 376 PVHPVRVNTIISFSG 390


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 305 PFHVIRINKMLSCAG 349
           P H +R+N ++S +G
Sbjct: 376 PVHPVRVNTIISFSG 390


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 111 TQRSVFSTWAKRERQ 155
           T   ++STW+K+ +Q
Sbjct: 145 TLGGLYSTWSKKSKQ 159


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 111 TQRSVFSTWAKRERQ 155
           T   ++STW+K+ +Q
Sbjct: 145 TLGGLYSTWSKKSKQ 159


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 372 IPVWSLSAPAHDNILLMRM 316
           +PV ++S    DNILL  +
Sbjct: 663 LPVRNVSVDVRDNILLKNL 681



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 77  TVYSYNIDNISLVGAPLCS 21
           T+   N+DN+SL   P  S
Sbjct: 446 TLLHLNLDNVSLSQVPALS 464


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +2

Query: 53  YRYCKNKPYPKSRFCRGVPD 112
           Y++C N  Y     C G  D
Sbjct: 206 YQFCDNLQYSFDNQCSGTID 225


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 254 GTCCNRYGLLPAPQNSAARTHQTLS 180
           G C   +GLLP    ++ + + T S
Sbjct: 201 GLCLTTFGLLPVNGVTSEKCNLTFS 225


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +2

Query: 53  YRYCKNKPYPKSRFCRGVPD 112
           Y++C N  Y     C G  D
Sbjct: 197 YQFCDNLQYSFDNQCSGTID 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,819
Number of Sequences: 336
Number of extensions: 2207
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)