Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P19
(546 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 297 3e-81
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 294 3e-80
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 294 3e-80
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 269 8e-73
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 175 1e-44
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 175 1e-44
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 175 1e-44
03_01_0034 + 318432-318825,318902-319851 174 3e-44
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 174 4e-44
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 174 4e-44
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 158 3e-39
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 153 7e-38
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 119 1e-27
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 34 0.085
12_01_0468 + 3661177-3661626 29 1.8
06_02_0189 - 12816751-12817088,12817272-12817330,12817745-128177... 29 1.8
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 4.2
07_01_0224 - 1646114-1648396 28 5.6
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 28 5.6
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 28 5.6
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 27 9.8
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 9.8
04_03_0868 - 20420298-20420915 27 9.8
02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165... 27 9.8
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 297 bits (730), Expect = 3e-81
Identities = 137/179 (76%), Positives = 156/179 (87%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVIS 277
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 294 bits (722), Expect = 3e-80
Identities = 135/179 (75%), Positives = 155/179 (86%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRL+ Q++SS+T SLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVIS 277
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 294 bits (722), Expect = 3e-80
Identities = 135/179 (75%), Positives = 155/179 (86%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRL+ Q++SS+T SLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVIS 277
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 269 bits (660), Expect = 8e-73
Identities = 128/200 (64%), Positives = 155/200 (77%), Gaps = 21/200 (10%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 159 AANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 218
Query: 189 VDYGKKSKLEFAIYPAPQ---------------------VSTAVVEPYNSILTTHTTLEH 305
VDYG+KSKL F IYP+PQ +STAVVEPYNS+L+TH+ +EH
Sbjct: 219 VDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEH 278
Query: 306 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQT 485
+D ++DNEAIYDIC+R+LDIERPTYTNLNRLI Q++SS+T SLRFDGA+NVD+TEFQT
Sbjct: 279 TDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQT 338
Query: 486 NLVPYPRIHFPLVTYAPVIS 545
NLVPYPRIHF L +YAP+IS
Sbjct: 339 NLVPYPRIHFMLSSYAPIIS 358
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 175 bits (427), Expect = 1e-44
Identities = 79/179 (44%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 175 bits (427), Expect = 1e-44
Identities = 79/179 (44%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 175 bits (427), Expect = 1e-44
Identities = 79/179 (44%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 174 bits (424), Expect = 3e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 174 bits (423), Expect = 4e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 277 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 336
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 337 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 396
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 397 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 455
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 174 bits (423), Expect = 4e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 158 bits (383), Expect = 3e-39
Identities = 78/195 (40%), Positives = 116/195 (59%), Gaps = 16/195 (8%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ----------------GFLIFHXXX 140
A NN+A+GHYT G E++D VLD +RK A+ C LQ GF + H
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLG 156
Query: 141 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 320
LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 157 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM 216
Query: 321 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPY 500
++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+
Sbjct: 217 VLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 276
Query: 501 PRIHFPLVTYAPVIS 545
PR+HF +V +AP+ S
Sbjct: 277 PRLHFFMVGFAPLTS 291
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 153 bits (372), Expect = 7e-38
Identities = 78/200 (39%), Positives = 116/200 (58%), Gaps = 21/200 (10%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG---------------------FLI 125
A NN+A+GHYT G E++D VLD +RK A+ C LQG F +
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQV 156
Query: 126 FHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEH 305
H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E+
Sbjct: 157 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 216
Query: 306 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQT 485
+D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 217 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 276
Query: 486 NLVPYPRIHFPLVTYAPVIS 545
NL+P+PR+HF +V +AP+ S
Sbjct: 277 NLIPFPRLHFFMVGFAPLTS 296
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 119 bits (287), Expect = 1e-27
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A G++ G+++VD ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 189 VDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 365
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L
Sbjct: 159 DRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERL 218
Query: 366 DIERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 539
+ PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 219 HLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 33.9 bits (74), Expect = 0.085
Identities = 24/109 (22%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = -2
Query: 530 VRDQWEMDTWVGHQVG-LELR*IDIEGAVETQRVGNR*YDLADKTIEVGVGRAFNIQVTA 354
+++++++ T V ++ L+ D+ A+ ++VG+ DL D+ + + + +
Sbjct: 19 LKEEYKLQTGVREKINFLKSELEDMHAAL--RKVGSMHPDLLDEQVRIWASKVRELSYDM 76
Query: 353 ADVIDGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGHLGCGIDSELQFR 207
DVID F+V + ++ GC +R+V H+ CG+ ++++ R
Sbjct: 77 EDVIDAFLVRVDGSV---PANPGCLERLV-------HMMCGLFTKIKVR 115
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 185 ESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQ 63
E LH + E E VE+EE +E +V E + +E++
Sbjct: 56 EQLHSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEE 96
>06_02_0189 -
12816751-12817088,12817272-12817330,12817745-12817773,
12817808-12818013,12818245-12818329
Length = 238
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 318 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITDSL 440
F+ DN I D +R +E P + +L L QI+SS + L
Sbjct: 130 FLTDNSTIADTAKRRNFLEEPGHWSLRPLWTQIISSTSIDL 170
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -3
Query: 520 SGKWIRG*GTKLVWNSVRSTLRAPSKRRESVIDDTIWPIRRLR 392
S W R W+ RS R+PS+ R D P RR R
Sbjct: 1245 SRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPR 1287
>07_01_0224 - 1646114-1648396
Length = 760
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 2 HEGRKQLCSWSLHHW 46
H GRK L W L HW
Sbjct: 644 HHGRKMLVDWVLQHW 658
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 484 VWNSVRSTLRAPSKRRESVIDDTIWPIRRLRL 389
+WN+ S R R E++ID T W IR ++
Sbjct: 313 LWNTGGSCNRTEPLREEAMIDQTEWAIRNAQV 344
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 113 LEACALVSEFADAVEDQVYDFLS 45
+ A AL+ E D VED + DFLS
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLS 125
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 68 PRPHPQTR*PMHRPPGIPHLPLVRWWHRFWFHFSPHGATLR 190
P P P P PP P P R HR W F+PHG R
Sbjct: 330 PSPSPPFPSPPSPPPP-PTSPSPRQ-HRGWAIFAPHGGHAR 368
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 68 PRPHPQTR*PMHRPPGIPHLP 130
PRPHP R H PP P P
Sbjct: 129 PRPHPDIRILAHAPPPAPPPP 149
>04_03_0868 - 20420298-20420915
Length = 205
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 35 LHHWKG--NRRLGPRPHPQTR*PMHRPP 112
LH +K +RLGPRP Q+R P H P
Sbjct: 10 LHCYKAPEEQRLGPRPATQSRPPPHLLP 37
>02_01_0251 -
1652356-1652522,1652564-1652608,1652658-1652733,
1652976-1653041,1653120-1653238,1653334-1653508,
1653604-1653881,1654253-1654436,1654455-1654550,
1654872-1655012,1655091-1655123
Length = 459
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 137 ERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVTTS 24
E + +EE+ A + SE +DAVE+ Y VV+ S
Sbjct: 154 EYIHEEENQSAVPITSEESDAVENYTYSEPPQQVVSQS 191
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,005,080
Number of Sequences: 37544
Number of extensions: 386453
Number of successful extensions: 1200
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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