Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P19
(546 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 298 2e-81
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 298 2e-81
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 293 4e-80
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 293 4e-80
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 293 5e-80
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 293 5e-80
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 286 8e-78
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 177 5e-45
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 177 5e-45
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 175 2e-44
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 174 3e-44
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 174 4e-44
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 174 4e-44
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 174 4e-44
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 173 5e-44
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 171 3e-43
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 116 1e-26
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 115 2e-26
At3g53090.1 68416.m05851 HECT-domain-containing protein / ubiqui... 29 2.0
At1g03850.2 68414.m00367 glutaredoxin family protein contains IN... 29 2.0
At1g03850.1 68414.m00366 glutaredoxin family protein contains IN... 29 2.0
At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to ... 28 3.5
At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to ... 28 3.5
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 3.5
At4g30150.1 68417.m04287 expressed protein 28 4.7
At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)... 27 6.2
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 27 6.2
At1g58080.1 68414.m06582 ATP phosphoribosyl transferase 1 (ATP-P... 27 6.2
At1g18390.1 68414.m02297 protein kinase family protein contains ... 27 6.2
At5g65510.1 68418.m08241 ovule development protein, putative sim... 27 8.2
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At3g14050.1 68416.m01773 RelA/SpoT protein, putative (RSH2) near... 27 8.2
At1g66970.1 68414.m07615 glycerophosphoryl diester phosphodieste... 27 8.2
At1g35420.1 68414.m04394 dienelactone hydrolase family protein l... 27 8.2
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 298 bits (731), Expect = 2e-81
Identities = 137/179 (76%), Positives = 156/179 (87%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS 277
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 298 bits (731), Expect = 2e-81
Identities = 137/179 (76%), Positives = 156/179 (87%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS 277
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 293 bits (720), Expect = 4e-80
Identities = 134/179 (74%), Positives = 156/179 (87%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLN 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRL+ Q++SS+T SLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS 277
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 293 bits (720), Expect = 4e-80
Identities = 134/179 (74%), Positives = 156/179 (87%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLN 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRL+ Q++SS+T SLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS 277
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 293 bits (719), Expect = 5e-80
Identities = 134/179 (74%), Positives = 155/179 (86%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRL+ Q++SS+T SLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS 277
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 293 bits (719), Expect = 5e-80
Identities = 134/179 (74%), Positives = 155/179 (86%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTYTNLNRL+ Q++SS+T SLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS 277
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 286 bits (701), Expect = 8e-78
Identities = 130/179 (72%), Positives = 153/179 (85%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
AANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+ LL+ERLS
Sbjct: 99 AANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
VD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LD
Sbjct: 159 VDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLD 218
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
IERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS
Sbjct: 219 IERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS 277
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 177 bits (430), Expect = 5e-45
Identities = 79/179 (44%), Positives = 117/179 (65%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 98 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 157
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 158 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 217
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 218 LSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 276
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 177 bits (430), Expect = 5e-45
Identities = 79/179 (44%), Positives = 117/179 (65%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 98 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 157
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 158 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 217
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 218 LSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 276
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 175 bits (426), Expect = 2e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 174 bits (424), Expect = 3e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 174 bits (423), Expect = 4e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 174 bits (423), Expect = 4e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 174 bits (423), Expect = 4e-44
Identities = 78/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 173 bits (422), Expect = 5e-44
Identities = 77/179 (43%), Positives = 116/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 171 bits (416), Expect = 3e-43
Identities = 77/179 (43%), Positives = 115/179 (64%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A+GHYT G E++D VLD +RK A+ LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 368
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 157 EEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216
Query: 369 IERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 545
+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 116 bits (278), Expect = 1e-26
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 189 VDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 365
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L
Sbjct: 159 DRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERL 218
Query: 366 DIERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 539
+ PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 219 HLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 115 bits (277), Expect = 2e-26
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = +3
Query: 9 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 188
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 189 VDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 365
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L
Sbjct: 159 DRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERL 218
Query: 366 DIERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 539
+ PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 219 HLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
>At3g53090.1 68416.m05851 HECT-domain-containing protein /
ubiquitin-transferase family protein / IQ
calmodulin-binding motif-containing protein contains
Pfam profiles PF00632: HECT-domain
(ubiquitin-transferase), PF00612: IQ calmodulin-binding
motif
Length = 1142
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 352 AAVTWILNARPTPTSIVLSARSYHRLPTLCVSTAPSM 462
A+ W+ R + I +AR++ LPT V T PSM
Sbjct: 693 ASALWLSPGRTSRPPIAFAARTHEVLPTSDVLTTPSM 729
>At1g03850.2 68414.m00367 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 150
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 334 KPSMTSAAVTWILNARPTPTSI 399
KPS +S++++W+ + P PTSI
Sbjct: 29 KPSSSSSSLSWLTSGSPKPTSI 50
>At1g03850.1 68414.m00366 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 159
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 334 KPSMTSAAVTWILNARPTPTSI 399
KPS +S++++W+ + P PTSI
Sbjct: 29 KPSSSSSSLSWLTSGSPKPTSI 50
>At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -2
Query: 341 DGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGHLGCGIDSELQFRLLAVVNGESLHEERS 162
DG IV I + QG + K + + Y S G + CG S+ + + V+ ++L +
Sbjct: 1058 DGSIVVEVQGIEIGQG-LWTKVKQMAAY-SLGLIQCGTTSDELLKKIRVIQSDTLSMVQG 1115
Query: 161 ETRTGATTERVEDEESLEAC 102
G+TT E C
Sbjct: 1116 SMTAGSTTSEASSEAVRICC 1135
>At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -2
Query: 341 DGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGHLGCGIDSELQFRLLAVVNGESLHEERS 162
DG IV I + QG + K + + Y S G + CG S+ + + V+ ++L +
Sbjct: 1058 DGSIVVEVQGIEIGQG-LWTKVKQMAAY-SLGLIQCGTTSDELLKKIRVIQSDTLSMVQG 1115
Query: 161 ETRTGATTERVEDEESLEAC 102
G+TT E C
Sbjct: 1116 SMTAGSTTSEASSEAVRICC 1135
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 189 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 350
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 351 CRRNLDIERPTYTNL 395
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
>At4g30150.1 68417.m04287 expressed protein
Length = 2009
Score = 27.9 bits (59), Expect = 4.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 246 STAVVEPYNSILTTHTTLEHSDCAFMVD-NEAIYDIC-RRNL--DIERPTYTNLNRLIGQ 413
S V+EP++ L TH T ++ C F+ E D+ NL D + +L RLI
Sbjct: 295 SCLVLEPFSRFLMTHPTTKNGFCDFLDKLFEPFMDVLGLLNLIEDKNKDLEISLLRLIED 354
Query: 414 IVS-SITDSLRFDGALNV 464
I+S ++ S DG L +
Sbjct: 355 ILSLALFHSAHIDGFLGL 372
>At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)
family protein similar to SP|P41972 Isoleucyl-tRNA
synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase)
(IleRS) {Staphylococcus aureus}; contains Pfam profile
PF00133: tRNA synthetases class I (I, L, M and V)
Length = 1093
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 322 WSTMKPSMTSAAVTWILNARPTPTSIVLSARSYHRLPTLCVSTAPSMSI*RSSRPTWC 495
W T KP++ A W + T+ + + + +P V+ +M+ SSR WC
Sbjct: 528 WRTKKPTIFRATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMT---SSRSDWC 582
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/57 (22%), Positives = 33/57 (57%)
Frame = +3
Query: 321 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITDSLRFDGALNVDLTEFQTNL 491
++D+E +D ++LD+ ++L+ ++ +I +S ++LR + A N + ++L
Sbjct: 1113 LIDSEEAFDYLVKSLDVRGVRESHLHFMLLKIEASFKEALRRNVAANPGVCSISSSL 1169
>At1g58080.1 68414.m06582 ATP phosphoribosyl transferase 1
(ATP-PRT1) identical to ATP phosphoribosyl transferase
GI:6683617 from [Arabidopsis thaliana]
Length = 411
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 337 PSMTS-AAVTWILNARP-TPTSIVLSARSYHRLPTLCVSTAPSMSI*RSSRPTWCPTHVS 510
PS +S + T IL+ P T S+++ R RL T CVST S S P P V
Sbjct: 13 PSSSSFPSSTPILSPPPSTAFSVIVPRRRCLRLVTSCVSTVQSSVATNGSSPAPAPAAVV 72
Query: 511 I 513
+
Sbjct: 73 V 73
>At1g18390.1 68414.m02297 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 605
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 78 CGRGPSLRFPFQWCSDHEHSCLRPS 4
CG+GP + +PF E C PS
Sbjct: 39 CGKGPQISYPFYLSGKQESFCGYPS 63
>At5g65510.1 68418.m08241 ovule development protein, putative
similar to AINTEGUMENTA (GI:1209099) [Arabidopsis
thaliana]
Length = 437
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 26 SWSLHHWKGNRRLGPRPHPQTR*PMHRPPGIPHLPLVRWWHRFWFHFSP 172
S S H ++L P P + P P GIP P V ++H+ +F P
Sbjct: 365 SSSSDHNLQQQQLLPSSSPSDQNPNSIPCGIPFEPSVLYYHQNFFQHYP 413
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 ILTTHTTLEHSDCAFM-VDNEAIYDICRRNLDIERPTYTNLNRLIGQIV 419
+LTT + H +C +++ +CRRNLD P N+ LI +++
Sbjct: 130 LLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAP--ENIKELIIEVI 176
>At3g14050.1 68416.m01773 RelA/SpoT protein, putative (RSH2) nearly
identical to RelA/SpoT homolog RSH2 [Arabidopsis
thaliana] GI:7141306; contains Pfam profiles PF01966: HD
domain, PF04607: Region found in RelA / SpoT proteins
Length = 709
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 419 YDLADKTIEVGVGRAFNIQVTAADVIDGFIVDHESTIGVFQGGVGC 282
YD +D ++ +F + A ++ F DH+S I V G V C
Sbjct: 84 YDRSDDLKDLSFSSSFGY--SPAKFVNSFRRDHQSPISVLHGPVSC 127
>At1g66970.1 68414.m07615 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family
Length = 763
Score = 27.1 bits (57), Expect = 8.2
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = -2
Query: 230 IDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDF 51
I+ +F V+N +S+ TG T VE + + V F + Q YDF
Sbjct: 578 IEDIKKFANAVVINKDSVFPNSDSFLTGQTNV-VERLQKSQLPVYVELFRNEFVSQAYDF 636
Query: 50 LSNGVVTTSIVVCG 9
S+ V + + G
Sbjct: 637 FSDATVEINAYIYG 650
>At1g35420.1 68414.m04394 dienelactone hydrolase family protein low
similarity to dienelactone hydrolase [Rhodococcus
opacus] GI:23094407; contains Pfam profile PF01738:
Dienelactone hydrolase family
Length = 310
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 161 ETRTGATTERVEDEESLEACALVS 90
ET GA V+D+E EAC LV+
Sbjct: 63 ETSDGAINVEVDDDEEEEACELVN 86
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,010,319
Number of Sequences: 28952
Number of extensions: 281874
Number of successful extensions: 866
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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