Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P18
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.77 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   1.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 245 SGSGPDQVPAGVQTHVTETL 186
           SGSG +Q P G  +HV+  L
Sbjct: 529 SGSGNNQPPGGPSSHVSAVL 548


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -1

Query: 413 GHEYVTFLVQHVLTLVGLR--TGESYDS 336
           GH  + F VQ++LT +  R   G SY++
Sbjct: 68  GHNCLDFTVQNILTFLSCRFHQGASYNT 95


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +3

Query: 351 PGAKPYEGENMLYEKCDILVPAAVEQVIH-KENAHRIQAKIIAEAANGPTTPAA 509
           PGA  Y+ ENML +  +        +  H   + + I  ++     N   TP A
Sbjct: 414 PGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDPNYISPEVFPNTNNAIMTPPA 467


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +3

Query: 351 PGAKPYEGENMLYEKCDILVPAAVEQVIH-KENAHRIQAKIIAEAANGPTTPAA 509
           PGA  Y+ ENML +  +        +  H   + + I  ++     N   TP A
Sbjct: 362 PGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDPNYISPEVFPNTNNAIMTPPA 415


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 477 EAANGPTTPAADKILIDRKILVIPD 551
           + AN  TTP ++++L+D  +   P+
Sbjct: 251 DMANMLTTPLSEEVLLDELLRHFPE 275


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 374 TLVGLRTGESYDSPILDSIVLKSLGVNTI 288
           +L   R+G S    ILDS+V K   +  I
Sbjct: 28  SLKNKRSGASLQVGILDSLVFKCYNLRRI 56


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +3

Query: 198 NVGLHTCRYLVRAGATCIGIIEHDGSIYNHDGID 299
           N G   C   V      + +I  DGS +N   +D
Sbjct: 286 NAGFLNCPIEVSIDNHTLSVISTDGSDFNATEVD 319


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 48  LPRWYPWKSFCYWQRCVHG 104
           +P ++ W SF  W R  +G
Sbjct: 581 IPIYFKWLSFLSWFRYGNG 599


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 48  LPRWYPWKSFCYWQRCVHG 104
           +P ++ W SF  W R  +G
Sbjct: 581 IPIYFKWLSFLSWFRYGNG 599


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,323
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)